Clone Sequence Records
BS11051.3prime Sequence
920 bp (899 high quality bases) assembled on 2006-04-19
> BS11051.3prime
ATGGTCTAGAAAGCTTCTATGTGAGCAGTTGCATCATGTTTAGGACCAGG
TGCGTGCGACTTCGCAGTAGGTATATGAATACGCTGAAGAAGAGCAGGGA
CATGGACATGGAGGCGCGCCAGCCCATGTTGTAGATGGAGCAGTACGGAC
ACTGAGAGCTGCCGCACACCTCACAAATGTTCAGCAGATATGTGGGCAGG
GCATCGAATATGGATTCGTTGAATCGTTCCGGTGCATAGTAGTCGTAAAT
GCGCACCGGCAGATAGCGAGACATATTGGCCACTGGATACCAACGCTCAA
TGGTGAAGTTTACACAGATATCCTCATGATCAAGATAATCGAAGTAAAAG
ACAATCTTGCGTTCTAGATAACGAGCTCTTCTCAGATTTCTCACACGGTT
GCTGAGCACATAGGTATCCAGTTTTTGCTGCTGTATCCAATAGCCAGTCG
GTATGGCCACATCCAAGACCGCCATGCCTGAGCGCTCCGACTCGTTTTGG
TTTATCCAATTTTGACAAGCCACATAGGAGATATGCGACTGATTCCTGCC
GTGGAAGATTGCCTTGGTATGAAGTCCGAAGGCTGGCACTGGCGGCTTGG
TCTGGAACTTCTCAATGTCCACATTGTACTGCACGTGCATCTGCAGGATG
GCATAGCCAGCACCCTTGGCCTGAACCTTGATGGTGCCCCAGGCATCTGG
AATCTCGATACTCTGCAATTTCGCCAGATTCGTGTCATCAATGTAAAGCG
TTTGTGTTTTGCCGCCCTGCGAAGAGGCCTCGATCTCCACGGTCAACGAG
GAAACCTCGCGCAGCCTAGATCGGACTGTGTACTCCACAAGAGCCTTGAG
GGCAGCACTGGTATCCTGGGTGGATGCCCATCCGCCGTCGTTTAAGCGCT
GCGAGTTCAACCATCGCACA
BS11051.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:01:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7586-PA | 5283 | Mcr-RA | 4380..5283 | 920..17 | 4520 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:46:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcr-RA | 6296 | CG7586-RA | 4554..5459 | 920..15 | 4530 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:46:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8075920..8076136 | 704..920 | 1085 | 100 | Plus |
| 2L | 23513712 | 2L | 8074954..8075168 | 15..229 | 1075 | 100 | Plus |
| 2L | 23513712 | 2L | 8075663..8075858 | 510..705 | 980 | 100 | Plus |
| 2L | 23513712 | 2L | 8075428..8075602 | 335..509 | 875 | 100 | Plus |
| 2L | 23513712 | 2L | 8075254..8075359 | 229..334 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:46:24 has no hits.
BS11051.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:57:10 Download gff for
BS11051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcr-PA | 4381..5283 | 17..919 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:24:00 Download gff for
BS11051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7586-PA | 4381..5283 | 17..919 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 12:52:14 Download gff for
BS11051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcr-RA | 4555..5459 | 15..919 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:57:10 Download gff for
BS11051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcr-RA | 4555..5459 | 15..919 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:57:10 Download gff for
BS11051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8075920..8076135 | 704..919 | 100 | | Plus |
| 2L | 8074954..8075167 | 15..228 | 100 | <- | Plus |
| 2L | 8075254..8075359 | 229..334 | 100 | <- | Plus |
| 2L | 8075428..8075602 | 335..509 | 100 | <- | Plus |
| 2L | 8075663..8075856 | 510..703 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 12:52:14 Download gff for
BS11051.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8074954..8075167 | 15..228 | 100 | <- | Plus |
| arm_2L | 8075254..8075359 | 229..334 | 100 | <- | Plus |
| arm_2L | 8075428..8075602 | 335..509 | 100 | <- | Plus |
| arm_2L | 8075663..8075856 | 510..703 | 100 | <- | Plus |
| arm_2L | 8075920..8076135 | 704..919 | 100 | | Plus |
BS11051.5prime Sequence
928 bp (746 high quality bases) assembled on 2006-04-19
> BS11051.5prime
GAAGTTATCAGTCGACATGATGTGGCACTTGCTGCGCGCCCTGCTCGTGG
TAGCCGCCGTCTTGGATGCACTGCAACCGGCGGTCGGACAAAACGACAAC
TACTACAACCCCAACCAGAACCAGCAGAATCCCCAGCAGCCGCTACTGCC
CAACCAGCAGTGGGGTAACAATCCACAGACGAATCAGTATAGCAACAACA
ACCAAAACTTTGGCCAAACGAATCCCAGTGATCGCCCGCCGTACAGGACC
GATTCGGGGAGCTACAACGATATTGCCGGGCAAGATGACTATAATAAACG
AGTGGGAGGAGGCTATCAGGACAACGAGGAGCCGAGTCTGACTCGTGGAA
AGTCGTCCTATAACATCAAGGCCACCTTCCTGGAATCGCTGCATTCCAGG
GAGCCCACTTACTTCATTGTGGCATCTCGAATGGTCAGACCTGGTCTAAT
CTATCAGGTGTCCGTATCCATTCTTCAAGCTCAGTACCCGATAACCGTTC
ATGCCAGCATCGCGTGCGATGGTGTCCAAATCAGCGGAGACTCTAAGGAT
GTCAAGGAGGGCATACCGGAGACGTTGCTCATGAGGATCCCACCAACTAG
TGTGACTGGAAGCTATAAGCTTCGAGTGGAAGGTTTCTACCAGAACGTTT
TCGGTGGCCTCGCCTTCCTGAACGAAACAAGACTAGACTTCTCACAGCGC
TCCATGACGATATTTGTGCAGACCGATAAGCCTCTTTATATGCAAGGGGA
AACTGTGCGATTTAGGACCATTCCGATCACCACCGAACTGAANGGATTTG
ACAATCCCGTCGATGTGTACATGCTGGATCCAAACAGGCATATTCTTAAA
CGTTGGCTATCGCGTCAAATCAACTTGGGGTTCGGTTTTCGCTGGAGTAC
AAACTTTTCGGATCAGCCCACTTTTTGG
BS11051.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:01:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7586-PA | 5283 | Mcr-RA | 1..852 | 17..868 | 4241 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:25:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcr-RA | 6296 | CG7586-RA | 175..1080 | 17..925 | 4399 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:25:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8079763..8080610 | 864..17 | 4229 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:25:39 has no hits.
BS11051.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:57:11 Download gff for
BS11051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcr-PA | 1..908 | 17..928 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:24:01 Download gff for
BS11051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7586-PA | 1..908 | 17..928 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 03:05:30 Download gff for
BS11051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcr-RA | 160..1082 | 5..928 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:28:08 Download gff for
BS11051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcr-RA | 160..1082 | 5..928 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:28:08 Download gff for
BS11051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8079763..8080616 | 8..864 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 03:05:30 Download gff for
BS11051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8079763..8080616 | 8..864 | 99 | | Minus |
BS11051.complete Sequence
5315 bp assembled on 2009-08-24
GenBank Submission: KX803568
> BS11051.complete
GAAGTTATCAGTCGACATGATGTGGCACTTGCTGCGCGCCCTGCTCGTGG
TAGCCGCCGTCTTGGATGCACTGCAACCGGCGGTCGGACAAAACGACAAC
TACTACAACCCCAACCAGAACCAGCAGAATCCCCAGCAGCCGCTACTGCC
CAACCAGCAGTGGGGTAACAATCCACAGACGAATCAGTATAGCAACAACA
ACCAAAACTTTGGCCAAACGAATCCCAGTGATCGCCCGCCGTACAGGACC
GATTCGGGGAGCTACAACGATATTGCCGGGCAAGATGACTATAATAAACG
AGTGGGAGGAGGCTATCAGGACAACGAGGAGCCGAGTCTGACTCGTGGAA
AGTCGTCCTATAACATCAAGGCCACCTTCCTGGAATCGCTGCATTCCAGG
GAGCCCACTTACTTCATTGTGGCATCTCGAATGGTCAGACCTGGTCTAAT
CTATCAGGTGTCCGTATCCATTCTTCAAGCTCAGTACCCGATAACCGTTC
ATGCCAGCATCGCGTGCGATGGTGTCCAAATCAGCGGAGACTCTAAGGAT
GTCAAGGAGGGCATACCGGAGACGTTGCTCATGAGGATCCCACCAACTAG
TGTGACTGGAAGCTATAAGCTTCGAGTGGAAGGTTTCTACCAGAACGTTT
TCGGTGGCCTCGCCTTCCTGAACGAAACAAGACTAGACTTCTCACAGCGC
TCCATGACGATATTTGTGCAGACCGATAAGCCTCTTTATATGCAAGGGGA
AACTGTGCGATTTAGGACCATTCCGATCACCACCGAACTGAAGGGATTTG
ACAATCCCGTCGATGTGTACATGCTGGATCCAAACAGGCATATTCTTAAA
CGTTGGCTATCGCGTCAATCAAACTTGGGTTCCGTTTCGCTGGAGTACAA
ACTTTCGGATCAGCCCACTTTTGGAGAATGGACTATCCGTGTAATAGCTC
AGGGACAGCAAGAGGAGAGTCACTTCACCGTGGAGGAATACTATCAGACC
CGATTCGAAGTGAATGTTACCATGCCTGCGTACTTCTTCACAACGGATCC
GTTTATCTACGGAAGGGTGATGGCTAACTTTACCAGTGGCCTACCAGTTA
GAGGCAATCTCACAATCAAGGCCACGATCCGCCCAATTGGATACTTCAGC
AACCAAGTTCTAAATGAGAAGTATCGCCTGGGTCGTTCACCTTTGGAGCA
AACTAACCTATACAATGAGCGATGGCGCTACAATAATCCCAACCAGAATC
CGCAAGTGCAGTATAATGTGCCTGGACAACTGCCACAGGATGGAGCAGAT
CTTTCACAGGATATTTTGTACAGGAATCAATATGTGGTCGAGCGACACTA
TCAGTTCGACGAGGAGTGGCCATTCTGGGTTAGGAAACCCGAGTATCAGG
ACAGCAGCTACGAGGCGTGGAGTGGAACTTATCGAAAGACCCTGCCCTAC
TTGCGCTACTTCAATGGTACCTTTGACTTCAAGTGGCCATTGAGGGAGCT
AGAGCTTCTGGTGCCCAATCTGGCCAACTCTGAGGTGCTGATCACGGCCA
CTGTTGGTGAAAAGTTCTACGATGAGATCATCAGTGGTTACTCCGTGGCC
AGGGTGTATAATTCCAGTCTGAGGGTGGTATTCCTTGGCGATTCGCCGCA
GGTCTTCAAGCCCGCCATGCCATTTACCACATATCTGGCTGTTGAGTACC
ATGATGGTTCGCCAATTGATCCAAACCTATTACGCCAGGGTTTAATGGAA
GTCTCTGGTTTCGTGGAGAGCCGCAATGGTGGCAGGAGGGACTGGCCCGC
CCAGCGATTGCCTATGTCGCAGCAAAGCGATGGCATTTGGGAGGTGAAGA
TTGACATCAGGAATGATCTGAACCTGGACGATCGCCCACAAGCAAGAGAC
TTCTTGAACGGCGTTCAGAACATGCGCTTGCAGGCGAACTTTGTGGATCC
GCGTGGTGAACGCATTCAAACGGAGCTCCTTTTGGTGTCTCACTATTCGC
CCAGAAATCAGCACATTAAGGTCACCACCAGCACAGAGAAACCAGTGGTT
GGGGAGTATATCATCTTCCACATCCGCACGAATTTCTACCTCGAAGAGTT
CAACTATCTCATTATGTCAAAGGGTGTTATCCTGGTGAATGACCGCGAAA
CCATTACAGAGGGCATTAAAACCATTGCTGTTGTTCTGAGTTCCGAAATG
GCACCTGTGGCTACGATTGTAGTGTGGAAGATTAACCAGCAGGGACAGGT
TGTGGCCGATTCCCTTACGTTCCCAGTTAATGGCATCTCCCGGAATAACT
TTACCGTATATATCAACAATCGCAAAGCGAGAACCGGAGAAAAAGTGGAG
GTGGCTATCTTTGGAGAACCGGGCTCGTATGTTGGTCTCTCTGGCATCGA
CAGTGCATTCTACACAATGCAAGCCGGCAACGAGCTCACTTACGCCAAGA
TCATCACTAAGATGTCCAACTTCGACGAGCAGACCAATGGAACGTATAAG
CACATTTGGTACTCTCACGAAGGCAATCCCGATGAGCTGGTGTACTTCCC
CGCCTCGTCCTTTGGCGTCGATGCAAATCGCACTTTTGAGTACAGTGGAC
TGATCGTATTTACGGATGGTTATGTACCCAGAAGGCAGGACACCTGCAAT
CGTACTTTGGGTTTCGGAGAGTGTTTGAGTGGACGTTGTTATCGCCTGGA
GAAGCAGTGCGATGGTTTGTTTGATTGTGATGATGGAACGGATGAGATCA
ATTGCCATGCGCGTAATGACACAGAGCTGTTGAACTACAGAAAGTACCGA
TTTAATCGCGTGCTTCGCCATTACGAAAATGTGTGGCTATGGAAGGATGT
GAACATTGGACCACATGGTCGATACATTTTTAATGTGGAGGTGCCTGATC
GCCCCGCCTATTGGATGGTCAGTGCGTTTAGTGTGAGTCCATCGAAAGGC
TTTGGAATGATGAACAAGGCCTTGGAGTACGTTGGTGTCCAACCATTCTT
CATAAACGTGGAAATGCCGGAAGCTTGCCGACAAGGCGAGCAGGTGGGCA
TCCGTGTCACTGTTTTCAACTATATGATAACTCCCATCGAGGCGATTGTC
GTGCTGCACGACAGTCCGGACTACAAGTTTGTGCACGTGGAGGAGGATGG
CATCGTCAGATCGTATAACCCCAGAACTAGCTTTGGTGAACATCAATTTT
TCATCTACTTGGAGGCTCAAGGCACGACGGTGGTTTACGTGCCCGTTGTA
CCTCAGCGTCTAGGCAATGTGGATGTGACCCTACACGTGGCCACTTTACT
TGGAACAGATACCATAACGCGAACACTGCATGTAGAATCGGATGGTCTGC
CACAGTATCGTCATCAATCCGTGCTACTGGATCTCTCTAACCGCGCCTAT
GTCCTAGAATACATGCATGTTAATGTAACTCAAACGCCAGAAATTCCATA
CCAAGTGGATCGTTACTTTGTGTACGGCTCAAATAAGGCTAGGATATCCG
TAGTGGGTGATGTGGTTGGTCCCATTTTCCCCACCATGCCCGTAAATGCC
AGCTCCCTGCTTTCCTTGCCCATGGAGTCGGGCGAACAGAATGCTTTCAG
CTTCGCCGCCAATCTCTACACGATTATGTACATGCGATTAATTAATCAAC
GCAACAAAACGCTGGAGAAGAATGCCTTTTACCACATGAACATTGGCTAT
CAGCGGCAGTTGAGTTTTATGCGGCCCGATGGCAGCTTCTCACTGTTCCG
TTCCGATTGGAACAACTCCGATTCGTCCGTCTGGTTGACTAGCTACTGCT
TAAGGGTGTTCCAAGAGGCCAGCTTCTACGAATGGGAGAACTTCATCTGG
ATCGATGCCACAATTATTGAAAAGAACATGAGATGGCTTCTGCAACACCA
GACGCCACAGGGATCCTTCTTCGAGGTCACGTGGCTGCCGGATAGGAAGA
TGAATCGCACCAACTTTGACAAGAACATCACGCTAACGTCCCATGTACTC
ATAACCTTGGCCACCGTAAAGGATATCTCTGGCACTCTGGGCTCTCGAGT
TGCTTTGGCCACGCAGCGTGCCTTGGCGTATATAGAACGAAATATGGACT
TCCTTAGACACCAGGCGCAACCTTTTGATGTGGCCATTACAGCGTACGCC
CTGCAGCTTTGTAACTCTCCGATTGCCGAGGAAGTATTCGCCATCCTGCG
TCGCCAGGCCAGGACTATAGGCGATTTTATGTACTGGGGTAACCAGGAAA
TACCTCAACCTCCACGCAAGCTGGAGAATCAAAAGTGGTTCTCGCTGCCC
CGTCTGCCATACGAATATGATTCGCTGAATATAGAGACAACCGCCTACGC
GCTATTGGTTTATGTGGCGCGCCGTGAGTTCTTCGTGGATCCCATTGTGC
GATGGTTGAACTCGCAGCGCTTAAACGACGGCGGATGGGCATCCACCCAG
GATACCAGTGCTGCCCTCAAGGCTCTTGTGGAGTACACAGTCCGATCTAG
GCTGCGCGAGGTTTCCTCGTTGACCGTGGAGATCGAGGCCTCTTCGCAGG
GCGGCAAAACACAAACGCTTTACATTGATGACACGAATCTGGCGAAATTG
CAGAGTATCGAGATTCCAGATGCCTGGGGCACCATCAAGGTTCAGGCCAA
GGGTGCTGGCTATGCCATCCTGCAGATGCACGTGCAGTACAATGTGGACA
TTGAGAAGTTCCAGACCAAGCCGCCAGTGCCAGCCTTCGGACTTCATACC
AAGGCAATCTTCCACGGCAGGAATCAGTCGCATATCTCCTATGTGGCTTG
TCAAAATTGGATAAACCAAAACGAGTCGGAGCGCTCAGGCATGGCGGTCT
TGGATGTGGCCATACCGACTGGCTATTGGATACAGCAGCAAAAACTGGAT
ACCTATGTGCTCAGCAACCGTGTGAGAAATCTGAGAAGAGCTCGTTATCT
AGAACGCAAGATTGTCTTTTACTTCGATTATCTTGATCATGAGGATATCT
GTGTAAACTTCACCATTGAGCGTTGGTATCCAGTGGCCAATATGTCTCGC
TATCTGCCGGTGCGCATTTACGACTACTATGCACCGGAACGATTCAACGA
ATCCATATTCGATGCCCTGCCCACATATCTGCTGAACATTTGTGAGGTGT
GCGGCAGCTCTCAGTGTCCGTACTGCTCCATCTACAACATGGGCTGGCGC
GCCTCCATGTCCATGTCCCTGCTCTTCTTCAGCGTATTCATATACCTACT
GCGAAGTCGCACGCACCTGGTCCTAAACATGATGCAACTGCTCACATAGA
AGCTTTCTAGACCAT
BS11051.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:29:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcr-RA | 5283 | CG7586-PA | 1..5283 | 17..5299 | 26415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcr-RA | 6296 | CG7586-RA | 175..5459 | 17..5301 | 26425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8075920..8079668 | 4612..864 | 18745 | 100 | Minus |
| 2L | 23513712 | 2L | 8079763..8080610 | 864..17 | 4240 | 100 | Minus |
| 2L | 23513712 | 2L | 8074954..8075168 | 5301..5087 | 1075 | 100 | Minus |
| 2L | 23513712 | 2L | 8075663..8075858 | 4806..4611 | 980 | 100 | Minus |
| 2L | 23513712 | 2L | 8075428..8075602 | 4981..4807 | 875 | 100 | Minus |
| 2L | 23513712 | 2L | 8075254..8075359 | 5087..4982 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:29:32 has no hits.
BS11051.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:04 Download gff for
BS11051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcr-RA | 162..5444 | 17..5299 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:49:11 Download gff for
BS11051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcr-RA | 175..5457 | 17..5299 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:51 Download gff for
BS11051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcr-RA | 175..5457 | 17..5299 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:51 Download gff for
BS11051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8074956..8075167 | 5088..5299 | 100 | <- | Minus |
| 2L | 8075254..8075359 | 4982..5087 | 100 | <- | Minus |
| 2L | 8075428..8075602 | 4807..4981 | 100 | <- | Minus |
| 2L | 8075663..8075856 | 4613..4806 | 100 | <- | Minus |
| 2L | 8075920..8079667 | 865..4612 | 100 | <- | Minus |
| 2L | 8079763..8080610 | 17..864 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:49:11 Download gff for
BS11051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8074956..8075167 | 5088..5299 | 100 | <- | Minus |
| arm_2L | 8075254..8075359 | 4982..5087 | 100 | <- | Minus |
| arm_2L | 8075428..8075602 | 4807..4981 | 100 | <- | Minus |
| arm_2L | 8075663..8075856 | 4613..4806 | 100 | <- | Minus |
| arm_2L | 8075920..8079667 | 865..4612 | 100 | <- | Minus |
| arm_2L | 8079763..8080610 | 17..864 | 100 | | Minus |
BS11051.pep Sequence
Translation from 16 to 5298
> BS11051.pep
MMWHLLRALLVVAAVLDALQPAVGQNDNYYNPNQNQQNPQQPLLPNQQWG
NNPQTNQYSNNNQNFGQTNPSDRPPYRTDSGSYNDIAGQDDYNKRVGGGY
QDNEEPSLTRGKSSYNIKATFLESLHSREPTYFIVASRMVRPGLIYQVSV
SILQAQYPITVHASIACDGVQISGDSKDVKEGIPETLLMRIPPTSVTGSY
KLRVEGFYQNVFGGLAFLNETRLDFSQRSMTIFVQTDKPLYMQGETVRFR
TIPITTELKGFDNPVDVYMLDPNRHILKRWLSRQSNLGSVSLEYKLSDQP
TFGEWTIRVIAQGQQEESHFTVEEYYQTRFEVNVTMPAYFFTTDPFIYGR
VMANFTSGLPVRGNLTIKATIRPIGYFSNQVLNEKYRLGRSPLEQTNLYN
ERWRYNNPNQNPQVQYNVPGQLPQDGADLSQDILYRNQYVVERHYQFDEE
WPFWVRKPEYQDSSYEAWSGTYRKTLPYLRYFNGTFDFKWPLRELELLVP
NLANSEVLITATVGEKFYDEIISGYSVARVYNSSLRVVFLGDSPQVFKPA
MPFTTYLAVEYHDGSPIDPNLLRQGLMEVSGFVESRNGGRRDWPAQRLPM
SQQSDGIWEVKIDIRNDLNLDDRPQARDFLNGVQNMRLQANFVDPRGERI
QTELLLVSHYSPRNQHIKVTTSTEKPVVGEYIIFHIRTNFYLEEFNYLIM
SKGVILVNDRETITEGIKTIAVVLSSEMAPVATIVVWKINQQGQVVADSL
TFPVNGISRNNFTVYINNRKARTGEKVEVAIFGEPGSYVGLSGIDSAFYT
MQAGNELTYAKIITKMSNFDEQTNGTYKHIWYSHEGNPDELVYFPASSFG
VDANRTFEYSGLIVFTDGYVPRRQDTCNRTLGFGECLSGRCYRLEKQCDG
LFDCDDGTDEINCHARNDTELLNYRKYRFNRVLRHYENVWLWKDVNIGPH
GRYIFNVEVPDRPAYWMVSAFSVSPSKGFGMMNKALEYVGVQPFFINVEM
PEACRQGEQVGIRVTVFNYMITPIEAIVVLHDSPDYKFVHVEEDGIVRSY
NPRTSFGEHQFFIYLEAQGTTVVYVPVVPQRLGNVDVTLHVATLLGTDTI
TRTLHVESDGLPQYRHQSVLLDLSNRAYVLEYMHVNVTQTPEIPYQVDRY
FVYGSNKARISVVGDVVGPIFPTMPVNASSLLSLPMESGEQNAFSFAANL
YTIMYMRLINQRNKTLEKNAFYHMNIGYQRQLSFMRPDGSFSLFRSDWNN
SDSSVWLTSYCLRVFQEASFYEWENFIWIDATIIEKNMRWLLQHQTPQGS
FFEVTWLPDRKMNRTNFDKNITLTSHVLITLATVKDISGTLGSRVALATQ
RALAYIERNMDFLRHQAQPFDVAITAYALQLCNSPIAEEVFAILRRQART
IGDFMYWGNQEIPQPPRKLENQKWFSLPRLPYEYDSLNIETTAYALLVYV
ARREFFVDPIVRWLNSQRLNDGGWASTQDTSAALKALVEYTVRSRLREVS
SLTVEIEASSQGGKTQTLYIDDTNLAKLQSIEIPDAWGTIKVQAKGAGYA
ILQMHVQYNVDIEKFQTKPPVPAFGLHTKAIFHGRNQSHISYVACQNWIN
QNESERSGMAVLDVAIPTGYWIQQQKLDTYVLSNRVRNLRRARYLERKIV
FYFDYLDHEDICVNFTIERWYPVANMSRYLPVRIYDYYAPERFNESIFDA
LPTYLLNICEVCGSSQCPYCSIYNMGWRASMSMSLLFFSVFIYLLRSRTH
LVLNMMQLLT*
BS11051.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:40:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcr-PA | 1760 | CG7586-PA | 1..1760 | 1..1760 | 9327 | 100 | Plus |
| Tep2-PF | 1400 | CG7052-PF | 397..1393 | 631..1717 | 795 | 25.4 | Plus |
| Tep2-PD | 1408 | CG7052-PD | 397..1401 | 631..1717 | 786 | 25.1 | Plus |
| Tep2-PA | 1420 | CG7052-PA | 397..1413 | 631..1717 | 779 | 25 | Plus |
| Tep2-PG | 1409 | CG7052-PG | 397..1402 | 631..1717 | 769 | 24.7 | Plus |
| Tep2-PF | 1400 | CG7052-PF | 23..265 | 132..379 | 260 | 29.4 | Plus |
| Tep2-PD | 1408 | CG7052-PD | 23..265 | 132..379 | 260 | 29.4 | Plus |
| Tep2-PA | 1420 | CG7052-PA | 23..265 | 132..379 | 260 | 29.4 | Plus |
