Clone Sequence Records
BS11052.3prime Sequence
796 bp (758 high quality bases) assembled on 2006-04-19
> BS11052.3prime
ATGGTCTAGAAAGCTTTTAATCCCTATTGCTTAAGCCGTCCATGAAGGAC
GATGCCATTGGACTGGGCGTTCTGGAGATAATGTTGTCATTGCCATAGTC
ATCGGAGTTTGCATCCACTTGTTCTAGAAAATTGGATTTTCTACTCTGGG
GTATGCAACTCAGCGAATGTATTATTGGACTGCAGGCTTGATCGGCTGTT
TCGAGCGTGGTTGGTAAGTCTAGGAGTCGTTGATTTTGAATGCCATCCCC
TGGCCCCATGTGAGAAATGTGGTTGAAATTAGTCGGTGCTGATATCATCT
TTGATCTACGATCACTTTTGATGGTCTTGTTTATCTCCCTGATAGAGAAT
CTCCGCTTTATGCTCGGAAGTCCCTTTCGATTTCCGTCACGGTATTGCAA
AAGGCCCTTTGTGTGAATATTGGATAGGTAAACAATCAGCGGAGTGTCAT
TGACTGAGGACAGCACCACGTTTCCCAAATTGTTTAAGGGAAGTGATTGC
TTCAATCCAATCGACTGCACCCATTCGGCAGTCTGCGTATTGAATATATC
CAAATGTGTATCCGAAAACACCAGCAAGTGACCATCACAAAAGGTTATAT
ACGTAGGGAAGGCTGGATACATAATTTCCCTATCCCGAGACTTTCGCCCT
TGCAGGTCTACGTATATGGCCAGAGTCTGGAACACCAGTAAGTACTCCCC
GAAATTGCCGCCGCTGGGGCACAGAATTTCAATGACCCTGACCGCATCCA
CTCCGGAGTAGTTCAAAAATGCACATAACTGGTTCTCCGGATGAAC
BS11052.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:01:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4012-PA | 4914 | gek-RA | 4135..4906 | 796..25 | 3860 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:52:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gek-RA | 5108 | CG4012-RA | 4246..5025 | 796..17 | 3870 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:52:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24093009..24093210 | 595..796 | 1010 | 100 | Plus |
| 2R | 25286936 | 2R | 24092342..24092540 | 118..316 | 995 | 100 | Plus |
| 2R | 25286936 | 2R | 24092759..24092944 | 409..594 | 930 | 100 | Plus |
| 2R | 25286936 | 2R | 24092162..24092264 | 17..119 | 485 | 98.1 | Plus |
| 2R | 25286936 | 2R | 24092605..24092698 | 315..408 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 13:52:16 has no hits.
BS11052.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:57:12 Download gff for
BS11052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gek-PA | 4135..4914 | 17..796 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:24:03 Download gff for
BS11052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4012-PA | 4135..4914 | 17..796 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 10:28:37 Download gff for
BS11052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gek-RA | 4246..5028 | 11..796 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:55:42 Download gff for
BS11052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gek-RA | 4246..5028 | 11..796 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 17:55:42 Download gff for
BS11052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24092159..24092262 | 11..117 | 95 | <- | Plus |
| 2R | 24092342..24092538 | 118..314 | 100 | <- | Plus |
| 2R | 24092605..24092698 | 315..408 | 100 | <- | Plus |
| 2R | 24092759..24092944 | 409..594 | 100 | <- | Plus |
| 2R | 24093009..24093210 | 595..796 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 10:28:37 Download gff for
BS11052.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19979682..19979785 | 11..117 | 95 | <- | Plus |
| arm_2R | 19979865..19980061 | 118..314 | 100 | <- | Plus |
| arm_2R | 19980128..19980221 | 315..408 | 100 | <- | Plus |
| arm_2R | 19980282..19980467 | 409..594 | 100 | <- | Plus |
| arm_2R | 19980532..19980733 | 595..796 | 100 | | Plus |
BS11052.5prime Sequence
869 bp (803 high quality bases) assembled on 2006-04-19
> BS11052.5prime
GAAGTTATCACCCGACATGGAATACGAATCTTCCGAAATCAGTGATATAA
CCACAGGAAGCTGCAAGAAAAGGCTCACATTTCTGAAATGTATTCTAAGC
GACACCACAAGCGATCAAAAATGGGCGGCCGAGTTCGGCGAGGACACGGA
AGGACATCAGTTTTCGTTGGACTATCTGCTGGACACCTTCATCGTTCTCT
ATGACGAGTGCAGCAACTCCTCCCTGCGCAGGGAGAAGGGCGTCTCTGAT
TTCCTCAAACTATCCAAACCCTTCGTGCACATAGTGCGAAAGCTTCGACT
AAGCCGAGATGACTTTGACATACTCAAGATCATCGGACGCGGTGCCTTTG
GAGAAGTGTGCGTGGTTCAGATGATATCCACCGAAAAGGTGTATGCCATG
AAGATTCTGAACAAGTGGGAGATGCTGAAGAGGGCCGAGACGGCCTGCTT
CCGCGAGGAGCGGGATGTGTTGGTTTTCGGCGACCGGCAGTGGATCACCA
ACCTTCACTATGCCTTTCAAGACAATATTAACCTGTATCTGGTGATGGAC
TATTACTGCGGCGGAGACCTGCTTACATTGCTCAGCAAATTCGAGGACAA
GCTGCCCGAGGACATGGCCAAGTTCTACATCACAGAGATGATCCTGGCAA
TCAATAGTATTCACCAGATTAGGTACGTTCACAGGGACATCAAGCCGGAT
AATGTACTGCTCGATAAGCGCGGTCACGTGCGCCTGGCTGACTTTGGATC
CTGCCTGCGCCTGGACAAGGATGGCACCGTACAGTCCAACGTGGCCGTGG
GCACACCCGACTACATTTCCCCGGAAATTTTGAGGGCCATGGAGGACGGA
AAGGGACGCTACGGCACGG
BS11052.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:01:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4012-PA | 4914 | gek-RA | 1..853 | 17..869 | 4265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:14:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gek-RA | 5108 | CG4012-RA | 112..964 | 17..869 | 4265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:14:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24096685..24097019 | 869..535 | 1675 | 100 | Minus |
| 2R | 25286936 | 2R | 24097072..24097343 | 535..264 | 1360 | 100 | Minus |
| 2R | 25286936 | 2R | 24097407..24097626 | 263..44 | 1100 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 13:14:12 has no hits.
BS11052.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:57:13 Download gff for
BS11052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gek-PA | 1..853 | 17..869 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:24:04 Download gff for
BS11052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4012-PA | 1..853 | 17..869 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:25:23 Download gff for
BS11052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gek-RA | 112..964 | 17..869 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:49:14 Download gff for
BS11052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gek-RA | 112..964 | 17..869 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:49:14 Download gff for
BS11052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24096685..24097018 | 536..869 | 100 | <- | Minus |
| 2R | 24097072..24097343 | 264..535 | 100 | <- | Minus |
| 2R | 24097407..24097625 | 45..263 | 100 | <- | Minus |
| 2R | 24098498..24098525 | 17..44 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:25:23 Download gff for
BS11052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19984208..19984541 | 536..869 | 100 | <- | Minus |
| arm_2R | 19984595..19984866 | 264..535 | 100 | <- | Minus |
| arm_2R | 19984930..19985148 | 45..263 | 100 | <- | Minus |
| arm_2R | 19986021..19986048 | 17..44 | 100 | | Minus |
BS11052.complete Sequence
4946 bp assembled on 2010-06-09
GenBank Submission: KX802526
> BS11052.complete
GAAGTTATCAGTCGACATGGAATACGAATCTTCCGAAATCAGTGATATAA
CCACAGGAAGCTGCAAGAAAAGGCTCACATTTCTGAAATGTATTCTAAGC
GACACCACAAGCGATCAAAAATGGGCGGCCGAGTTCGGCGAGGACACGGA
AGGACATCAGTTTTCGTTGGACTATCTGCTGGACACCTTCATCGTTCTCT
ATGACGAGTGCAGCAACTCCTCCCTGCGCAGGGAGAAGGGCGTCTCTGAT
TTCCTCAAACTATCCAAACCCTTCGTGCACATAGTGCGAAAGCTTCGACT
AAGCCGAGATGACTTTGACATACTCAAGATCATCGGACGCGGTGCCTTTG
GAGAAGTGTGCGTGGTTCAGATGATATCCACCGAAAAGGTGTATGCCATG
AAGATTCTGAACAAGTGGGAGATGCTGAAGAGGGCCGAGACGGCCTGCTT
CCGCGAGGAGCGGGATGTGTTGGTTTTCGGCGACCGGCAGTGGATCACCA
ACCTTCACTATGCCTTTCAAGACAATATTAACCTGTATCTGGTGATGGAC
TATTACTGCGGCGGAGACCTGCTTACATTGCTCAGCAAATTCGAGGACAA
GCTGCCCGAGGACATGGCCAAGTTCTACATCACAGAGATGATCCTGGCAA
TCAATAGTATTCACCAGATTAGGTACGTTCACAGGGACATCAAGCCGGAT
AATGTACTGCTCGATAAGCGCGGTCACGTGCGCCTGGCTGACTTTGGATC
CTGCCTGCGCCTGGACAAGGATGGCACCGTACAGTCCAACGTGGCCGTGG
GCACACCCGACTACATTTCCCCGGAAATTTTGAGGGCCATGGAGGACGGA
AAGGGACGCTACGGCACGGAGTGTGATTGGTGGTCACTCGGAGTGTGCAT
GTACGAGATGCTCTACGGAGAGACGCCCTTCTACGCAGAAAGTTTGGTGG
AAACCTATGGCAAGATCATGAACCACCAAAACTGTTTCAACTTACCGTCA
CAAGAAACCCTAAATTACAAGGTATCGGAGACGTCTCAGGACTTGCTCTG
CAAACTGATATGTATTCCCGAGAACCGACTTGGTCAGAACGGCATCCAAG
ACTTCATGGACCACCCCTGGTTTGTGGGCATCGACTGGAAGAACATAAGG
CAGGGACCAGCACCGTATGTGCCGGAAGTGTCCAGTCCAACAGATACCTC
CAACTTCGATGTGGACGACAATGACGTCCGGTTAACGGACTCCATTCCGC
CGTCAGCCAATCCTGCCTTCTCTGGATTTCACTTGCCCTTCATCGGGTTT
ACCTTCTCGCTGACCAGCAGCTCCACCTTGGACTCGAAGAAGAACCAGAG
CTCGGGCTTCGGAGATGATACCTTGGACACCATAAGCAGTCCCCAGTTGG
CCATTCTGCCGAGCAACAACTCGGAGACACCGGTGGACTCCGTTCAGCTG
AAGGCACTAAACGATCAGCTTGCGGCTTTGAAGCAGGAAAAGGCAGAGTT
GTCAAAGCAACACAACGAGGTTTTCGAACGGCTCAAAACTCAAGACTCTG
AACTTCAGGACGCCATCTCTCAACGAAACATCGCCATGATGGAGTACTCG
GAGGTCACTGAGAAACTCTCGGAGCTGCGAAATCAGAAGCAGAAGCTCTC
CCGCCAAGTCAGGGACAAGGAGGAGGAGCTTGATGGTGCCATGCAGAAGA
ACGACAGCCTGCGGAACGAACTGAGAAAGTCGGACAAAACGCGAAGGGAA
TTGGAGCTTCACATTGAGGATGCTGTCATCGAGGCTGCCAAAGAAAAGAA
GCTACGGGAGCATGCGGAGGACTGCTGCAGGCAGCTGCAGATGGAGCTGC
GGAAGGGCTCCTCGAGTGTGGAGACAACTATGCCACTCAGCATTTCCTCC
GAGATGTCGTCATACGAGATCGAACGCCTTGAACTCCAGTTCTCGGAAAA
GCTAAGTCATCAGCAGACGCGCCACAATATGGAGTTGGAAGCACTGCGCG
AGCAGTTCAGCGAGCTAGAGAACGCGAATTTGGCACTCACCAAGGAGTTG
CAACAAACACAGGAAAGGCTGAAGTACACTCAAATGGAGTCGATTACCGA
TTCCGCCGAAACGCTTTTGGAATTGAAGAAGCAGCATGATTTGGAGAAAA
GCTCATGGTTCGAGGAAAAGCAGAGATTAAGCTCCGAGGTGAATCTCAAG
TCAAAGAGTCTTAAAGAACTTCAAGCGGAGGACGACGAGATCTTCAAGGA
GTTGCGAATGAAACGGGAGGCCATCACCTTGTGGGAGCGGCAAATGGCGG
AGATTATTCAATGGGTGTCCGATGAGAAAGACGCGCGAGGCTACTTGCAG
GCCTTGGCCACCAAAATGACGGAGGAGTTGGAGTATCTGAAGCATGTGGG
TACCTTCAACAACAACGGTGTGGACAATAAGAACTGGAGGAACCGGCGCT
CTCAGAAGCTGGACAAGATGGAGCTGCTCAACCTGCAGAGCGCGCTGCAA
AGGGAGATTCAGGCCAAGAACATGATATCGGATGAGCTGAGTCAAACCAG
ATCGGACCTCATATCCACACAGAAAGAGGTTCGAGACTACAAAAAGCGGT
ACGACTCCATACTGCACGATTTCCAGAAGAAGGAAACCGAACTGCGGGAC
TTGCAGAAGGGAGGCTTGGAATACTCCGAGTCGTTCCTCAACAAATCAAC
GCATCATGGGCTAAGCAGCGCCTTCTTCCGCGACATGTCAAAGAACTCCG
AGATTATAGATTCTGCCGAGAGCTTTGGCAACGAATCCGGCGACAATTTC
ACTCCCAACTTCTTCCAGTCCGGCAATTCGGGCATGCTCTTCAACTACGA
GCCAAAGTATGCGGGTAAGAACAACAAGGATCATTCGTCCATGAAAGAAG
CCTCGGTCAGCGATTTGTCCCGCGAGGAGAGTGACCAGCTGGTCAAGGAA
TCTCAGAAGAAAGTGCCCGGCAACACGGCGATCCATCAGTTCCTGGTGCG
CACATTCAGTAGTCCCACAAAATGCAATCACTGCACATCGCTGATGGTGG
GGCTCACACGACAAGGCGTTGTGTGCGAGATCTGCGGATTCGCCTGTCAC
ACGATCTGCTGCCAAAAGGTGCCCACCACGTGCCCCGTGCCCATGGATCA
GACGAAACGGCCGCTGGGAATCGATCCCACCAGGGGAATCGGCACGGCAT
ACGAGGGCTACGTAAAGGTCCCCAAGTCGGGGGTGATTAAGCGAGGATGG
ATTCGGCAGTTCGTAGTTGTTTGCGACTTTAAGTTGTTCCTCTATGACAT
TTCGCCGGATCGGTGTGCATTGCCCAGCGTGAGCGTGTCCCAAGTGCTGG
ATATGAGGGATCCCGAGTTCTCGGTGGGTAGTGTGCGCGAAAGCGATGTC
ATCCATGCCGCCAAGAAAGATGTGCCATGTATTTTCAAGATAAAAACCGC
CCTTATCGATGGCGGTCTTTCGCTGAACACCCTTATGCTCGCCGACAACG
AGTCGGAGAAGTCCAAGTGGGTCATTGCCCTGGGAGAACTACATCGAATA
TTGAAACGAAACAGCTTACCAAATACTGCTATATTTAAAGTTAACGAGAT
TCTGGACAATACCCTGTCTTTAATAAGAAACGCATTGTGTTCTGTCATCA
TATATCCAAATCAAATACTCTTGGGCACCGAAGACGGCCTGTTCTACATT
AATCTGGACCAGTACGAGATCGCTCGTATTGGCGAAAGCAAGAAGATTCT
TCAGCTATGGTACATTGAAGAGGAGCAGATCCTCGTCATTCTCTGCGGAA
AGCAGCGCAACTTGCGTTTATTACCTATAAGGGCATTAGAGGCTAGTGAT
GTCGAGTGGATCAAGGTGGTCGAATCGAAGAACTGCATATCTGCTTGCAC
TGGAATAATCCGCCGCTTCCCCAATATCGTTTACTCATTTATCATCGCTC
TAAAGCGGCCGAATAACCACACACAAATCGTAGTTTACGAAATCAATAGA
ACGCGCACAAGACACCAGAAGACTTGCGAATTCACAATTGGCTACATGGC
GCAGCACCTGCAGATTCTGTCCGACATGCGATTGGTTGTGGCTCACCAAA
GCGGATTTACCGCATACTTTCTGCGCGGAGAAGCAACTGCAATGTCTTTG
GTTCATCCGGAGAACCAGTTATGTGCATTTTTGAACTACTCCGGAGTGGA
TGCGGTCAGGGTCATTGAAATTCTGTGCCCCAGCGGCGGCAATTTCGGGG
AGTACTTACTGGTGTTCCAGACTCTGGCCATATACGTAGACCTGCAAGGG
CGAAAGTCTCGGGATAGGGAAATTATGTATCCAGCCTTCCCTACGTATAT
AACCTTTTGTGATGGTCACTTGCTGGTGTTTTCGGATACACATTTGGATA
TATTCAATACGCAGACTGCCGAATGGGTGCAGTCGATTGGATTGAAGCAA
TCACTTCCCTTAAACAATTTGGGAAACGTGGTGCTGTCCTCAGTCAATGA
CACTCCGCTGATTGTTTACCTATCCAATATTCACACAAAGGGCCTTTTGC
AATACCGTGACGGAAATCGAAAGGGACTTCCGAGCATAAAGCGGAGATTC
TCTATCAGGGAGATAAACAAGACCATCAAAAGTGATCGTAGATCAAAGAT
GATATCAGCACCGACTAATTTCAACCACATTTCTCACATGGGGCCAGGGG
ATGGCATTCAAAATCAACGACTCCTAGACTTACCAACCACGCTCGAAACA
GCCGATCAAGCCTGCAGTCCAATAATACATTCGCTGAGTTGCATACCCCA
GAGTAGAAAATCCAATTTTCTAGAACAAGTGGATGCAAACTCCGATGACT
ATGGCAATGACAACATTATCTCCAGAACGCCCAGTCCAATGGCATCGTCC
TTCATGGACGGCTTAAGCAATAATGATTAAAAGCTTTCTAGACCAT
BS11052.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:50:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gek-RA | 4914 | CG4012-PA | 1..4914 | 17..4930 | 24555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gek-RA | 5108 | CG4012-RA | 112..5025 | 17..4930 | 24555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24094110..24097019 | 3444..535 | 14520 | 99.9 | Minus |
| 2R | 25286936 | 2R | 24093277..24093706 | 4145..3716 | 2150 | 100 | Minus |
| 2R | 25286936 | 2R | 24093777..24094059 | 3716..3434 | 1400 | 99.6 | Minus |
| 2R | 25286936 | 2R | 24097072..24097343 | 535..264 | 1360 | 100 | Minus |
| 2R | 25286936 | 2R | 24097407..24097626 | 263..44 | 1100 | 100 | Minus |
| 2R | 25286936 | 2R | 24093009..24093215 | 4352..4146 | 1035 | 100 | Minus |
| 2R | 25286936 | 2R | 24092342..24092540 | 4829..4631 | 995 | 100 | Minus |
| 2R | 25286936 | 2R | 24092759..24092944 | 4538..4353 | 930 | 100 | Minus |
| 2R | 25286936 | 2R | 24092162..24092264 | 4930..4828 | 515 | 100 | Minus |
| 2R | 25286936 | 2R | 24092605..24092698 | 4632..4539 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:50:17 has no hits.
BS11052.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 09:28:52 Download gff for
BS11052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gek-RA | 110..5021 | 17..4928 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:30 Download gff for
BS11052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gek-RA | 112..5023 | 17..4928 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:03 Download gff for
BS11052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gek-RA | 112..5023 | 17..4928 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:03 Download gff for
BS11052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24092164..24092262 | 4830..4928 | 100 | <- | Minus |
| 2R | 24092342..24092538 | 4633..4829 | 100 | <- | Minus |
| 2R | 24092605..24092698 | 4539..4632 | 100 | <- | Minus |
| 2R | 24092759..24092944 | 4353..4538 | 100 | <- | Minus |
| 2R | 24093009..24093215 | 4146..4352 | 100 | <- | Minus |
| 2R | 24093277..24093705 | 3717..4145 | 100 | <- | Minus |
| 2R | 24093777..24094053 | 3440..3716 | 100 | <- | Minus |
| 2R | 24094115..24097018 | 536..3439 | 99 | <- | Minus |
| 2R | 24097072..24097343 | 264..535 | 100 | <- | Minus |
| 2R | 24097407..24097625 | 45..263 | 100 | <- | Minus |
| 2R | 24098498..24098525 | 17..44 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:30 Download gff for
BS11052.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19979687..19979785 | 4830..4928 | 100 | <- | Minus |
| arm_2R | 19979865..19980061 | 4633..4829 | 100 | <- | Minus |
| arm_2R | 19980128..19980221 | 4539..4632 | 100 | <- | Minus |
| arm_2R | 19980282..19980467 | 4353..4538 | 100 | <- | Minus |
| arm_2R | 19980532..19980738 | 4146..4352 | 100 | <- | Minus |
| arm_2R | 19980800..19981228 | 3717..4145 | 100 | <- | Minus |
| arm_2R | 19981300..19981576 | 3440..3716 | 100 | <- | Minus |
| arm_2R | 19981638..19984541 | 536..3439 | 99 | <- | Minus |
| arm_2R | 19984595..19984866 | 264..535 | 100 | <- | Minus |
| arm_2R | 19984930..19985148 | 45..263 | 100 | <- | Minus |
| arm_2R | 19986021..19986048 | 17..44 | 100 | | Minus |
BS11052.pep Sequence
Translation from 16 to 4929
> BS11052.pep
MEYESSEISDITTGSCKKRLTFLKCILSDTTSDQKWAAEFGEDTEGHQFS
LDYLLDTFIVLYDECSNSSLRREKGVSDFLKLSKPFVHIVRKLRLSRDDF
DILKIIGRGAFGEVCVVQMISTEKVYAMKILNKWEMLKRAETACFREERD
VLVFGDRQWITNLHYAFQDNINLYLVMDYYCGGDLLTLLSKFEDKLPEDM
AKFYITEMILAINSIHQIRYVHRDIKPDNVLLDKRGHVRLADFGSCLRLD
KDGTVQSNVAVGTPDYISPEILRAMEDGKGRYGTECDWWSLGVCMYEMLY
GETPFYAESLVETYGKIMNHQNCFNLPSQETLNYKVSETSQDLLCKLICI
PENRLGQNGIQDFMDHPWFVGIDWKNIRQGPAPYVPEVSSPTDTSNFDVD
DNDVRLTDSIPPSANPAFSGFHLPFIGFTFSLTSSSTLDSKKNQSSGFGD
DTLDTISSPQLAILPSNNSETPVDSVQLKALNDQLAALKQEKAELSKQHN
EVFERLKTQDSELQDAISQRNIAMMEYSEVTEKLSELRNQKQKLSRQVRD
KEEELDGAMQKNDSLRNELRKSDKTRRELELHIEDAVIEAAKEKKLREHA
EDCCRQLQMELRKGSSSVETTMPLSISSEMSSYEIERLELQFSEKLSHQQ
TRHNMELEALREQFSELENANLALTKELQQTQERLKYTQMESITDSAETL
LELKKQHDLEKSSWFEEKQRLSSEVNLKSKSLKELQAEDDEIFKELRMKR
EAITLWERQMAEIIQWVSDEKDARGYLQALATKMTEELEYLKHVGTFNNN
GVDNKNWRNRRSQKLDKMELLNLQSALQREIQAKNMISDELSQTRSDLIS
TQKEVRDYKKRYDSILHDFQKKETELRDLQKGGLEYSESFLNKSTHHGLS
SAFFRDMSKNSEIIDSAESFGNESGDNFTPNFFQSGNSGMLFNYEPKYAG
KNNKDHSSMKEASVSDLSREESDQLVKESQKKVPGNTAIHQFLVRTFSSP
TKCNHCTSLMVGLTRQGVVCEICGFACHTICCQKVPTTCPVPMDQTKRPL
GIDPTRGIGTAYEGYVKVPKSGVIKRGWIRQFVVVCDFKLFLYDISPDRC
ALPSVSVSQVLDMRDPEFSVGSVRESDVIHAAKKDVPCIFKIKTALIDGG
LSLNTLMLADNESEKSKWVIALGELHRILKRNSLPNTAIFKVNEILDNTL
SLIRNALCSVIIYPNQILLGTEDGLFYINLDQYEIARIGESKKILQLWYI
EEEQILVILCGKQRNLRLLPIRALEASDVEWIKVVESKNCISACTGIIRR
FPNIVYSFIIALKRPNNHTQIVVYEINRTRTRHQKTCEFTIGYMAQHLQI
LSDMRLVVAHQSGFTAYFLRGEATAMSLVHPENQLCAFLNYSGVDAVRVI
EILCPSGGNFGEYLLVFQTLAIYVDLQGRKSRDREIMYPAFPTYITFCDG
HLLVFSDTHLDIFNTQTAEWVQSIGLKQSLPLNNLGNVVLSSVNDTPLIV
YLSNIHTKGLLQYRDGNRKGLPSIKRRFSIREINKTIKSDRRSKMISAPT
NFNHISHMGPGDGIQNQRLLDLPTTLETADQACSPIIHSLSCIPQSRKSN
FLEQVDANSDDYGNDNIISRTPSPMASSFMDGLSNND*
BS11052.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gek-PA | 1637 | CG4012-PA | 1..1637 | 1..1637 | 8481 | 100 | Plus |
| Rok-PB | 1381 | CG9774-PB | 37..1206 | 50..1142 | 1083 | 28 | Plus |
| Rok-PC | 1374 | CG9774-PC | 37..1215 | 50..1142 | 1071 | 28.1 | Plus |
| Rok-PD | 1381 | CG9774-PD | 28..1206 | 50..1142 | 1071 | 28.1 | Plus |
| Rok-PA | 1390 | CG9774-PA | 37..1215 | 50..1142 | 1071 | 28.1 | Plus |
