Clone Sequence Records
BS11067.3prime Sequence
225 bp (224 high quality bases) assembled on 2006-04-19
> BS11067.3prime
ATGGTCTAGAAAGCTTTCACTTCTTTCCCGACTTCTTGATGCCGCCTCCT
ACGAGAGGACCCTTCTTTGAGGCGTTCGCCTTGGCCGCCTCCAGAGCCTT
CTGCTGCTCCTTCTGCTTTTGCTTGAAGGCCATGTCGTCCTCGTCCAGGT
CTTTGGAGTCCTTCTTCGGCGCCTTCAGAGGCTTCTTCTTACCGCCCTCG
CGTCCAGACATGTCGACTGATAACT
BS11067.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:01:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13364-PA | 195 | CG13364-RA | 1..195 | 211..17 | 975 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:56:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13364-RA | 387 | CG13364-RA | 54..249 | 211..16 | 980 | 100 | Minus |
CG16824-RA | 407 | CG16824-RA | 71..265 | 211..17 | 570 | 86.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:56:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 624895..625090 | 16..211 | 980 | 100 | Plus |
2L | 23513712 | 2L | 13293079..13293273 | 211..17 | 570 | 86.2 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:56:41 has no hits.
BS11067.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:57:42 Download gff for
BS11067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-PA | 1..195 | 17..211 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:24:40 Download gff for
BS11067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-PA | 1..195 | 17..211 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-14 15:00:10 Download gff for
BS11067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-RA | 47..252 | 12..218 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:07:37 Download gff for
BS11067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-RA | 47..252 | 12..218 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:07:37 Download gff for
BS11067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 624892..625093 | 12..218 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-14 15:00:10 Download gff for
BS11067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 518925..519126 | 12..218 | 97 | | Plus |
BS11067.5prime Sequence
225 bp (224 high quality bases) assembled on 2006-04-19
> BS11067.5prime
GAAGTTATCAGTCGACATGTCTGGACGCGAGGGCGGTAAGAAGAAGCCTC
TGAAGGCGCCGAAGAAGGACTCCAAAGACCTGGACGAGGACGACATGGCC
TTCAAGCAAAAGCAGAAGGAGCAGCAGAAGGCTCTGGAGGCGGCCAAGGC
GAACGCCTCAAAGAAGGGTCCTCTCGTAGGAGGCGGCATCAAGAAGTCGG
GAAAGAAGTGAAAGCTTTCTAGACC
BS11067.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:01:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13364-PA | 195 | CG13364-RA | 1..195 | 17..211 | 975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:19:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13364-RA | 387 | CG13364-RA | 54..249 | 17..212 | 980 | 100 | Plus |
CG16824-RA | 407 | CG16824-RA | 71..265 | 17..211 | 570 | 86.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 14:19:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 624895..625090 | 212..17 | 980 | 100 | Minus |
2L | 23513712 | 2L | 13293079..13293273 | 17..211 | 570 | 86.2 | Plus |
Blast to na_te.dros performed on 2015-02-13 14:19:55 has no hits.
BS11067.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:57:43 Download gff for
BS11067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-PA | 1..195 | 17..211 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:24:41 Download gff for
BS11067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-PA | 1..195 | 17..211 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 03:04:44 Download gff for
BS11067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-RA | 47..252 | 10..216 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:14:35 Download gff for
BS11067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-RA | 47..252 | 10..216 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:14:35 Download gff for
BS11067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 624892..625093 | 10..216 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 03:04:44 Download gff for
BS11067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 518925..519126 | 10..216 | 97 | | Minus |
BS11067.complete Sequence
227 bp assembled on 2006-11-01
GenBank Submission: FJ636756
> BS11067.complete
GAAGTTATCAGTCGACATGTCTGGACGCGAGGGCGGTAAGAAGAAGCCTC
TGAAGGCGCCGAAGAAGGACTCCAAAGACCTGGACGAGGACGACATGGCC
TTCAAGCAAAAGCAGAAGGAGCAGCAGAAGGCTCTGGAGGCGGCCAAGGC
GAACGCCTCAAAGAAGGGTCCTCTCGTAGGAGGCGGCATCAAGAAGTCGG
GAAAGAAGTGAAAGCTTTCTAGACCAT
BS11067.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:37:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13364-RA | 195 | CG13364-PA | 1..195 | 17..211 | 975 | 100 | Plus |
CG16824-RA | 195 | CG16824-PA | 1..195 | 17..211 | 570 | 86.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:37:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13364-RA | 387 | CG13364-RA | 54..249 | 17..212 | 980 | 100 | Plus |
CG16824-RA | 407 | CG16824-RA | 71..265 | 17..211 | 570 | 86.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:37:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 624895..625090 | 212..17 | 980 | 100 | Minus |
2L | 23513712 | 2L | 13293079..13293273 | 17..211 | 570 | 86.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:37:38 has no hits.
BS11067.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:52:42 Download gff for
BS11067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-RA | 1..195 | 17..211 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:28:07 Download gff for
BS11067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-RA | 45..250 | 10..216 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:12:25 Download gff for
BS11067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-RA | 54..247 | 17..210 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:52:42 Download gff for
BS11067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-RA | 45..250 | 10..216 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:23:31 Download gff for
BS11067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13364-RA | 54..247 | 17..210 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:23:31 Download gff for
BS11067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 624897..625090 | 17..210 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:12:25 Download gff for
BS11067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 518930..519123 | 17..210 | 100 | | Minus |
BS11067.pep Sequence
Translation from 16 to 210
> BS11067.pep
MSGREGGKKKPLKAPKKDSKDLDEDDMAFKQKQKEQQKALEAAKANASKK
GPLVGGGIKKSGKK*
BS11067.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:05:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13364-PA | 64 | CG13364-PA | 1..64 | 1..64 | 324 | 100 | Plus |
CG16824-PA | 64 | CG16824-PA | 1..64 | 1..64 | 301 | 90.6 | Plus |