Clone Sequence Records
BS11093.3prime Sequence
393 bp (392 high quality bases) assembled on 2006-04-19
> BS11093.3prime
ATGGTCTAGAAAGCTTTCACTTCCGCTGTCTGGACTTTTGGGCCAGATCC
TTGGCGTAGGCCACGAACAGGATGTTGTGCTTGCTGGCCACCGGTTTCCC
GTCATCCTGATCGTATCGCACCTGCAGGGTATCCGAGTCCAGGGTAATAC
TGCCCACCGGCTGACCCGGTTTGATGTAATAGTTCTGGCCCAACGAAGTG
GGTCTATGCTCGGTGACGAAGTGATAACGCATCGGTTCCATCTCCTCAAT
GACCAGCTTGGGTCTGCTTGTGGTCACATTGATGAGCATCGGTTCCATTT
CCGTCTGGCTCACCGGTTGGGCGCCAGTTGAAGCTAACAGCGCCATTGCA
ACGATGACAACACTTGATTTGGTCCACATGTCGACTGATAACT
BS11093.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:02:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-PB | 363 | CG12481-RB | 1..363 | 379..17 | 1815 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 18:32:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-RB | 589 | CG12481-RB | 26..391 | 380..15 | 1830 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 18:32:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14187278..14187643 | 380..15 | 1830 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-06 18:32:41 has no hits.
BS11093.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:58:36 Download gff for
BS11093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-PB | 1..363 | 17..379 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:25:51 Download gff for
BS11093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-PB | 1..363 | 17..379 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:40:26 Download gff for
BS11093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 18..391 | 15..393 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:44:51 Download gff for
BS11093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 18..391 | 15..393 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:44:51 Download gff for
BS11093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14187270..14187643 | 15..393 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:40:26 Download gff for
BS11093.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14081303..14081676 | 15..393 | 98 | | Minus |
BS11093.5prime Sequence
393 bp (392 high quality bases) assembled on 2006-04-19
> BS11093.5prime
GAAGTTATCAGTCGACATGTGGACCAAATCAAGTGTTGTCATCGTTGCAA
TGGCGCTGTTAGCTTCAACTGGCGCCCAACCGGTGAGCCAGACGGAAATG
GAACCGATGCTCATCAATGTGACCACAAGCAGACCCAAGCTGGTCATTGA
GGAGATGGAACCGATGCGTTATCACTTCGTCACCGAGCATAGACCCACTT
CGTTGGGCCAGAACTATTACATCAAACCGGGTCAGCCGGTGGGCAGTATT
ACCCTGGACTCGGATACCCTGCAGGTGCGATACGATCAGGATGACGGGAA
ACCGGTGGCCAGCAAGCACAACATCCTGTTCGTGGCCTACGCCAAGGATC
TGGCCCAAAAGTCCAGACAGCGGAAGTGAAAGCTTTCTAGACC
BS11093.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:02:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-PB | 363 | CG12481-RB | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:54:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-RB | 589 | CG12481-RB | 26..391 | 16..381 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:54:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14187278..14187643 | 16..381 | 1830 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:54:42 has no hits.
BS11093.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:58:37 Download gff for
BS11093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-PB | 1..363 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:25:52 Download gff for
BS11093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-PB | 1..363 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 16:39:40 Download gff for
BS11093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 19..391 | 5..381 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:26:46 Download gff for
BS11093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 19..391 | 5..381 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:26:46 Download gff for
BS11093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14187271..14187643 | 5..381 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 16:39:40 Download gff for
BS11093.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14081304..14081676 | 5..381 | 98 | | Plus |
BS11093.complete Sequence
395 bp assembled on 2006-11-01
GenBank Submission: FJ636770
> BS11093.complete
GAAGTTATCAGTCGACATGTGGACCAAATCAAGTGTTGTCATCGTTGCAA
TGGCGCTGTTAGCTTCAACTGGCGCCCAACCGGTGAGCCAGACGGAAATG
GAACCGATGCTCATCAATGTGACCACAAGCAGACCCAAGCTGGTCATTGA
GGAGATGGAACCGATGCGTTATCACTTCGTCACCGAGCATAGACCCACTT
CGTTGGGCCAGAACTATTACATCAAACCGGGTCAGCCGGTGGGCAGTATT
ACCCTGGACTCGGATACCCTGCAGGTGCGATACGATCAGGATGACGGGAA
ACCGGTGGCCAGCAAGCACAACATCCTGTTCGTGGCCTACGCCAAGGATC
TGGCCCAAAAGTCCAGACAGCGGAAGTGAAAGCTTTCTAGACCAT
BS11093.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:48:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-RB | 363 | CG12481-PB | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:49:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-RB | 589 | CG12481-RB | 26..391 | 16..381 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:48:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14187278..14187643 | 16..381 | 1830 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:48:58 has no hits.
BS11093.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:52:32 Download gff for
BS11093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 1..363 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:27:54 Download gff for
BS11093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 19..391 | 5..381 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:55:10 Download gff for
BS11093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 27..388 | 17..378 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:52:32 Download gff for
BS11093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 19..391 | 5..381 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:55:04 Download gff for
BS11093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12481-RB | 27..388 | 17..378 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:55:04 Download gff for
BS11093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14187279..14187640 | 17..378 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:55:10 Download gff for
BS11093.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14081312..14081673 | 17..378 | 100 | | Plus |
BS11093.pep Sequence
Translation from 16 to 378
> BS11093.pep
MWTKSSVVIVAMALLASTGAQPVSQTEMEPMLINVTTSRPKLVIEEMEPM
RYHFVTEHRPTSLGQNYYIKPGQPVGSITLDSDTLQVRYDQDDGKPVASK
HNILFVAYAKDLAQKSRQRK*
BS11093.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:05:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12481-PB | 120 | CG12481-PB | 1..120 | 1..120 | 613 | 100 | Plus |