Clone Sequence Records
BS11094.3prime Sequence
516 bp (515 high quality bases) assembled on 2006-04-19
> BS11094.3prime
ATGGTCTAGAAAGCTTCTATTTTCCGTTCTTCTTTTTGGAACCTCCTCCG
GTGGCTTTTTGAGTGCGCCCCAACTGCATTTCCTTTAACTTAGCATCCAG
ACGCTTTTTCGCATTCTTCACATCCTCCTCCTGCCTGATGGTTTTCGCCG
GCTTTGGGTGCAGAAACTTCTTGCGCTCGTCCCGCTTAATCTCCTCGCCA
CATCCGTGCACCTCTGGCAGTCCGTGCTTGAAGCAGAATCTCTTCTTGCA
ATGCTGGCAGTCTTGGCCCATCAGGCTGGTTTTGGTTTTGCAGCGCGGAT
AGTCGCAGAGGTTATCCACTTCCTTGACGGCTGTCAGCACATCGTCCAGC
TTTAGATCCACCACCTGGCTGGGAATCCGCTCCAGTAGCTCCAATGTGTT
GTTTGTCCCATAGTCAACTCTTTTTCCTGGTTTTGCGGGCGGGAACAGGG
GAGCATCTTCAGTTTTCGACGAGGTAGAGGGTTTGTTTGGATCGTCTGCC
ATGTCGACTGATAACT
BS11094.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:02:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-PA | 486 | CG30094-RA | 1..486 | 502..17 | 2230 | 98.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:43:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-RA | 675 | CG30094-RA | 87..572 | 502..17 | 2310 | 98.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:43:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16142350..16142832 | 499..17 | 2295 | 98.3 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:43:04 has no hits.
BS11094.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:58:38 Download gff for
BS11094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-PA | 1..486 | 17..502 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:25:53 Download gff for
BS11094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-PA | 1..486 | 17..502 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:49:36 Download gff for
BS11094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 84..575 | 14..507 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:04:20 Download gff for
BS11094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 84..575 | 14..507 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:04:20 Download gff for
BS11094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16142350..16142835 | 14..499 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:49:36 Download gff for
BS11094.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12029855..12030340 | 14..499 | 98 | | Minus |
BS11094.5prime Sequence
516 bp (515 high quality bases) assembled on 2006-04-19
> BS11094.5prime
GAAGTTATCAGTCGACATGGCAGACGATCCAAACAAACCCTCTACCTCGT
CGAAAACTGAAGATGCTCCCCTGTTCCCGCCCGCAAAACCAGGAAAAAGA
GTTGACTATGGGACAAACAACACATTGGAGCTACTGGAGCGGATTCCCAG
CCAGGTGGTGGATCTAAAGCTGGACGATGTGCTGACAGCCGTCAAGGAAG
TGGATAACCTCTGCGACTATCCGCGCTGCAAAACCAAAACCAGCCTGATG
GGCCAAGACTGCCAGCATTGCAAGAAGAGATTCTGCTTCAAGCACGGACT
GCCAGAGGTGCACGGATGTGGCGAGGAGATTAAGCGGGACGAGCGCAAGA
AGTTTCTGCACCCAAAGCCGGCGAAAACCATCAGGCAGGAGGAGGATGTG
AAGAATGCGAAAAAGCGTCTGGATGCTAAGTTAAAGGAAATGCAGTTGGG
GCGCACTCAAAAAGCCACCGGAGGAGGTTCCAAAAAGAAGAACGGAAAAT
AGAAGCTTTCTAGACC
BS11094.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:02:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-PA | 486 | CG30094-RA | 1..486 | 17..502 | 2230 | 98.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:41:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-RA | 675 | CG30094-RA | 87..572 | 17..502 | 2310 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:41:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16142350..16142832 | 20..502 | 2295 | 98.3 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:41:55 has no hits.
BS11094.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:58:39 Download gff for
BS11094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-PA | 1..486 | 17..502 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:25:55 Download gff for
BS11094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-PA | 1..486 | 17..502 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:12:42 Download gff for
BS11094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 84..575 | 12..505 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:28:42 Download gff for
BS11094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 84..575 | 12..505 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:28:42 Download gff for
BS11094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16142350..16142835 | 20..505 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:12:42 Download gff for
BS11094.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12029855..12030340 | 20..505 | 98 | | Plus |
BS11094.complete Sequence
518 bp assembled on 2006-11-01
GenBank Submission: FJ636771
> BS11094.complete
GAAGTTATCAGTCGACATGGCAGACGATCCAAACAAACCCTCTACCTCGT
CGAAAACTGAAGATGCTCCCCTGTTCCCGCCCGCAAAACCAGGAAAAAGA
GTTGACTATGGGACAAACAACACATTGGAGCTACTGGAGCGGATTCCCAG
CCAGGTGGTGGATCTAAAGCTGGACGATGTGCTGACAGCCGTCAAGGAAG
TGGATAACCTCTGCGACTATCCGCGCTGCAAAACCAAAACCAGCCTGATG
GGCCAAGACTGCCAGCATTGCAAGAAGAGATTCTGCTTCAAGCACGGACT
GCCAGAGGTGCACGGATGTGGCGAGGAGATTAAGCGGGACGAGCGCAAGA
AGTTTCTGCACCCAAAGCCGGCGAAAACCATCAGGCAGGAGGAGGATGTG
AAGAATGCGAAAAAGCGTCTGGATGCTAAGTTAAAGGAAATGCAGTTGGG
GCGCACTCAAAAAGCCACCGGAGGAGGTTCCAAAAAGAAGAACGGAAAAT
AGAAGCTTTCTAGACCAT
BS11094.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:02:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-RA | 486 | CG30094-PA | 1..486 | 17..502 | 2310 | 98.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:02:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-RA | 675 | CG30094-RA | 87..572 | 17..502 | 2310 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:02:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16142350..16142832 | 20..502 | 2295 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:02:01 has no hits.
BS11094.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:52:33 Download gff for
BS11094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 1..486 | 17..502 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:27:56 Download gff for
BS11094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 54..545 | 12..505 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:00 Download gff for
BS11094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 87..565 | 17..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:52:33 Download gff for
BS11094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 54..545 | 12..505 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:08:49 Download gff for
BS11094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30094-RA | 87..565 | 17..495 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:08:49 Download gff for
BS11094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16142348..16142825 | 17..495 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:00 Download gff for
BS11094.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12029853..12030330 | 17..495 | 97 | | Plus |
BS11094.pep Sequence
Translation from 16 to 501
> BS11094.pep
MADDPNKPSTSSKTEDAPLFPPAKPGKRVDYGTNNTLELLERIPSQVVDL
KLDDVLTAVKEVDNLCDYPRCKTKTSLMGQDCQHCKKRFCFKHGLPEVHG
CGEEIKRDERKKFLHPKPAKTIRQEEDVKNAKKRLDAKLKEMQLGRTQKA
TGGGSKKKNGK*
BS11094.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:05:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30094-PA | 161 | CG30094-PA | 1..161 | 1..161 | 862 | 100 | Plus |
