Clone Sequence Records
BS11095.5prime Sequence
363 bp (362 high quality bases) assembled on 2006-04-19
> BS11095.5prime
GAAGTTATCAGTCGACATGGCAGCCGCAGTAGTCCAAAGTTTCGGCCAGG
AGGAGCTCTTCGTCAGCCGGGCCACAATTCAGTTGCAGTTGCCCCAGGGC
GGAGCCAGTTCGCCCATCTTCGAGTGGCGCACACAGGTGGCCACGCCCAC
GTCTGCCGCTGATCCCGCCCACGAGGAGAAGTGCATTAGTGGGCACCAGA
GCACGGAAGCTGCCACGCCCAAGAGCAATATCTACACGCCCCCACGAATC
CTGGGCACGGAGGCGAAGCGCAAGAATCTGCCCCAAACGTTGAGCAATTT
CTTCGAGGCGGAGCGCTACTCCAGCGCCTGGAATCGCGTGACCAAATAGA
AGCTTTCTAGACC
BS11095.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:02:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13117-PA | 333 | CG13117-RA | 1..333 | 17..349 | 1665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:41:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13117-RB | 1305 | CG13117-RB | 66..398 | 17..349 | 1665 | 100 | Plus |
CG13117-RA | 685 | CG13117-RA | 66..398 | 17..349 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:41:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9736710..9737042 | 17..349 | 1665 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:41:46 has no hits.
BS11095.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:58:41 Download gff for
BS11095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-PA | 1..333 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:25:58 Download gff for
BS11095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-PA | 1..333 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:12:40 Download gff for
BS11095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-RA | 58..404 | 8..358 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:28:14 Download gff for
BS11095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-RA | 58..404 | 8..358 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:28:14 Download gff for
BS11095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9736710..9737048 | 17..358 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:12:40 Download gff for
BS11095.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9736710..9737048 | 17..358 | 98 | | Plus |
BS11095.3prime Sequence
363 bp (362 high quality bases) assembled on 2006-04-19
> BS11095.3prime
ATGGTCTAGAAAGCTTCTATTTGGTCACGCGATTCCAGGCGCTGGAGTAG
CGCTCCGCCTCGAAGAAATTGCTCAACGTTTGGGGCAGATTCTTGCGCTT
CGCCTCCGTGCCCAGGATTCGTGGGGGCGTGTAGATATTGCTCTTGGGCG
TGGCAGCTTCCGTGCTCTGGTGCCCACTAATGCACTTCTCCTCGTGGGCG
GGATCAGCGGCAGACGTGGGCGTGGCCACCTGTGTGCGCCACTCGAAGAT
GGGCGAACTGGCTCCGCCCTGGGGCAACTGCAACTGAATTGTGGCCCGGC
TGACGAAGAGCTCCTCCTGGCCGAAACTTTGGACTACTGCGGCTGCCATG
TCGACTGATAACT
BS11095.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:02:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13117-PA | 333 | CG13117-RA | 1..333 | 349..17 | 1665 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:44:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13117-RB | 1305 | CG13117-RB | 66..398 | 349..17 | 1665 | 100 | Minus |
CG13117-RA | 685 | CG13117-RA | 66..398 | 349..17 | 1665 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:44:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9736710..9737042 | 349..17 | 1665 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:44:48 has no hits.
BS11095.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:58:40 Download gff for
BS11095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-PA | 1..333 | 17..349 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:25:57 Download gff for
BS11095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-PA | 1..333 | 17..349 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:28:30 Download gff for
BS11095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-RA | 58..404 | 8..358 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:04:20 Download gff for
BS11095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-RA | 58..404 | 8..358 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:04:20 Download gff for
BS11095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9736710..9737048 | 8..349 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:28:30 Download gff for
BS11095.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9736710..9737048 | 8..349 | 98 | | Minus |
BS11095.complete Sequence
365 bp assembled on 2006-11-01
GenBank Submission: FJ636772
> BS11095.complete
GAAGTTATCAGTCGACATGGCAGCCGCAGTAGTCCAAAGTTTCGGCCAGG
AGGAGCTCTTCGTCAGCCGGGCCACAATTCAGTTGCAGTTGCCCCAGGGC
GGAGCCAGTTCGCCCATCTTCGAGTGGCGCACACAGGTGGCCACGCCCAC
GTCTGCCGCTGATCCCGCCCACGAGGAGAAGTGCATTAGTGGGCACCAGA
GCACGGAAGCTGCCACGCCCAAGAGCAATATCTACACGCCCCCACGAATC
CTGGGCACGGAGGCGAAGCGCAAGAATCTGCCCCAAACGTTGAGCAATTT
CTTCGAGGCGGAGCGCTACTCCAGCGCCTGGAATCGCGTGACCAAATAGA
AGCTTTCTAGACCAT
BS11095.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:24:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13117-RB | 333 | CG13117-PB | 1..333 | 17..349 | 1665 | 100 | Plus |
CG13117-RA | 333 | CG13117-PA | 1..333 | 17..349 | 1665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:24:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13117-RB | 1305 | CG13117-RB | 66..398 | 17..349 | 1665 | 100 | Plus |
CG13117-RA | 685 | CG13117-RA | 66..398 | 17..349 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:24:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9736710..9737042 | 17..349 | 1665 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:24:04 has no hits.
BS11095.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:39:52 Download gff for
BS11095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-RA | 1..333 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:16:47 Download gff for
BS11095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-RA | 58..404 | 8..358 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:01 Download gff for
BS11095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-RA | 66..392 | 17..343 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:39:53 Download gff for
BS11095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-RA | 58..404 | 8..358 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:17:41 Download gff for
BS11095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13117-RA | 66..392 | 17..343 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:17:41 Download gff for
BS11095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9736710..9737036 | 17..343 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:01 Download gff for
BS11095.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9736710..9737036 | 17..343 | 100 | | Plus |
BS11095.pep Sequence
Translation from 16 to 348
> BS11095.pep
MAAAVVQSFGQEELFVSRATIQLQLPQGGASSPIFEWRTQVATPTSAADP
AHEEKCISGHQSTEAATPKSNIYTPPRILGTEAKRKNLPQTLSNFFEAER
YSSAWNRVTK*
BS11095.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:53:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13117-PB | 110 | CG13117-PB | 1..110 | 1..110 | 566 | 100 | Plus |
CG13117-PA | 110 | CG13117-PA | 1..110 | 1..110 | 566 | 100 | Plus |