Clone Sequence Records
BS11109.3prime Sequence
844 bp (779 high quality bases) assembled on 2006-04-19
> BS11109.3prime
ATGGTCTAGAAAGCTTCTACGCCGATTGGGTCTGCTGGACAGCCAATTTC
AACATGTGATTGGCGATACTATCTACAGTTAGGGATTGCGGGGACATCTC
GATCACTTGGGACTTGTGGCGGGCATAAAAACGCTGAGCTCCATTGATTT
GCGGCGCCAAATAGGTTAGCTGTCTCGGATCGGCGGCACTTATCCAGGCT
TCGTCGTTCGATGCTGACTTGATGATCAGATGATCACCGGTGTTAACGCC
CTCCGTGGCATCGTCGAATTGCGGCGATGGTAAGCGGTGGACCTGCAGCA
GGCGGTGCGAGGGCGTGGCATGGGAAAGCTCACAGGCGATCACATGCACC
TCAGACGGTTTGTTTGGTTCTTTAAGCAGCTGATAAAGCACCAGCATGCT
GCTTTGGTCCAAGTCGAGGCTAGGATAGTGCGTAGCAGCCAGGCAACGGC
CCAGCGGCCGGCCCAAGTCGTAGTTCATCAGAGTATCGCCGCTGCGATGA
TCCCAGACGGTGATGCGCATCTGGCCGTAGCCGATAAGGCGATCCTCTGA
AAGGCACTCAATGTGACGCAGCTCGTGGCGCAACTGCTTAAACTCCCGTA
TGGAGGCCAGCGTATCCAGCGTGGGCGTCAGTGAATATTTGCAAATGCCC
GAGCGCGACTTGCCCATCACCAGTTCCTGCTGCCATGCCATAACGAAGTA
ACGCGAATCCGCTATAGTTGTGTATATGACATGCGGCCATTCGCAATTGA
CAGCATCCAAGTGCACAGAGTGCATACGGGGTCGTAGTTCCTCCTCGCAA
AAGTAATACACATTCACATGTAGCGAGGTTAGCTTCACCTCCCT
BS11109.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:02:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16972-PA | 5133 | CG16972-RA | 4306..5133 | 844..17 | 4115 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:23:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16972-RA | 5882 | CG16972-RA | 4601..5429 | 844..16 | 4130 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 11:23:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13197555..13198283 | 16..744 | 3645 | 100 | Plus |
| 2L | 23513712 | 2L | 13198345..13198445 | 744..844 | 490 | 99 | Plus |
Blast to na_te.dros performed on 2015-02-01 11:23:53 has no hits.
BS11109.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:58:55 Download gff for
BS11109.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-PA | 4306..5133 | 17..844 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:26:17 Download gff for
BS11109.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-PA | 4306..5133 | 17..844 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:37:22 Download gff for
BS11109.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-RA | 4601..5432 | 12..844 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:11:53 Download gff for
BS11109.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-RA | 4601..5432 | 12..844 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:11:53 Download gff for
BS11109.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13197552..13198282 | 12..743 | 99 | <- | Plus |
| 2L | 13198345..13198445 | 744..844 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:37:22 Download gff for
BS11109.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13197552..13198282 | 12..743 | 99 | <- | Plus |
| arm_2L | 13198345..13198445 | 744..844 | 99 | | Plus |
BS11109.5prime Sequence
852 bp (744 high quality bases) assembled on 2006-04-19
> BS11109.5prime
GAAGTTATCAGTCGACATGTCCAGAAGAGAAGCCAGCCTGATGGCCTACG
TAGCGGCGGAGGAACACCTACTGAACCGGTACTCGCCGCTGGAAGGCGAC
GAGATAGATACGGCCAGCGAAGCTCCAGGCGACGCATCGGACGTGGCTGA
GGATCGGGAGTATCCCACGGATCTTGTTGCATCTGTCACCAGATCCTCGA
GGACGGGAGCAGATCTGGACCCCGCCGTGGACAGCAACCTGCACGTGATC
TCCGACGACTCGGACACCCACAGCTTTATCTCGAGTGGCAGCGGCTTCAA
GGGCTGGCCGGAGGAGCAGCCGTCTTCCAGTTTCGTCCCTCAGAATGAAC
CCTTAATATTCGGACTTCGCCGGCAAATGATGATGACCGAAGAGACACAC
CAAGCCCCAGTATGGGCCACCTGCACACCGGCAAAACGTTCGTACAGCAG
CCACGAGGTCATCGAGATCAACGACTCACCCGAATCTGTCCAGGATCCGG
GCATTGCACTAAGCCCCGGCATGCTGCTGACAAATGGCAATGTTGACCAG
TTCGAAATGCTGTCCCACGAGAATGATGAGGCTGAACATGAACTTCAGGT
GGCCGAAGAAGGGGAGCAGTGTGTGATCTATGAGGCTGTGGATGGAGAGA
ACATGGTCGTTTTAGGAGAAGAACACTGCTGTGAGATCATAGTAGCTACC
CAGGGAGTGGCATGCGAGCAGGAGTTCGCCAGGGCCATCATGATGGCCGG
AAACGGTACCGGTGCATTGCTGGGCTTGCTGTCCGAGGAGAGTGATGCGA
ATGAGTGTCTCAATGGGACTGCCTACATCGAGGAGGTCGTGGAGGATATG
GG
BS11109.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:02:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16972-PA | 5133 | CG16972-RA | 1..836 | 17..852 | 4180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 05:17:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16972-RA | 5882 | CG16972-RA | 296..1131 | 17..852 | 4180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 05:17:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13202544..13203000 | 473..17 | 2285 | 100 | Minus |
| 2L | 23513712 | 2L | 13202030..13202409 | 852..473 | 1900 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 05:17:03 has no hits.
BS11109.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:58:56 Download gff for
BS11109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-PA | 1..836 | 17..852 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:26:19 Download gff for
BS11109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-PA | 1..836 | 17..852 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 07:10:38 Download gff for
BS11109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-RA | 292..1131 | 13..852 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 06:43:20 Download gff for
BS11109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-RA | 292..1131 | 13..852 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 06:43:20 Download gff for
BS11109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13202030..13202408 | 474..852 | 100 | <- | Minus |
| 2L | 13202544..13203002 | 13..473 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 07:10:38 Download gff for
BS11109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13202030..13202408 | 474..852 | 100 | <- | Minus |
| arm_2L | 13202544..13203002 | 13..473 | 99 | | Minus |
BS11109.complete Sequence
5182 bp assembled on 2010-09-14
GenBank Submission: KX800828
> BS11109.complete
TATAGCATACATTATACGAAGTTATCAGTCGACATGTCCAGAAGAGAAGC
CAGCCTGATGGCCTACGTAGCGGCGGAGGAACACCTACTGAACCGGTACT
CGCCGCTGGAAGGCGACGAGATAGATACGGCCAGCGAAGCTCCAGGCGAC
GCATCGGACGTGGCTGAGGATCGGGAGTATCCCACGGATCTTGTTGCATC
TGTCACCAGATCCTCGAGGACGGGAGCAGATCTGGACCCCGCCGTGGACA
GCAACCTGCACGTGATCTCCGACGACTCGGACACCCACAGCTTTATCTCG
AGTGGCAGCGGCTTCAAGGGCTGGCCGGAGGAGCAGCCGTCTTCCAGTTT
CGTCCCTCAGAATGAACCCTTAATATTCGGACTTCGCCGGCAAATGATGA
TGACCGAAGAGACACACCAAGCCCCAGTATGGGCCACCTGCACACCGGCA
AAACGTTCGTACAGCAGCCACGAGGTCATCGAGATCAACGACTCACCCGA
ATCTGTCCAGGATCCGGGCATTGCACTAAGCCCCGGCATGCTGCTGACAA
ATGGCAATGTTGACCAGTTCGAAATGCTGTCCCACGAGAATGATGAGGCT
GAACATGAACTTCAGGTGGCCGAAGAAGGGGAGCAGTGTGTGATCTATGA
GGCTGTGGATGGAGAGAACATGGTCGTTTTAGGAGAAGAACACTGCTGTG
AGATCATAGTAGCTACCCAGGGAGTGGCATGCGAGCAGGAGTTCGCCAGG
GCCATCATGATGGCCGGAAACGGTACCGGTGCATTGCTGGGCTTGCTGTC
CGAGGAGAGTGATGCGAATGAGTGTCTCAATGGGACTGCCTACATCGAGG
AGGTCGTGGAGGATATGGGTGTGGCCGAGGCACGATTGGCGGCTGGAAAC
AATGTGTACCTTAGTGATGCAGCGCTAGAACAGCCTTTAGTGCACCAGGA
TCTGGTCGACGACGAGGCTCCGGAGGAAAACGAAAACGCCACATTCTTAG
ACGATACACCGATGGAGGAGGAACGCCCAGATATTTGTCAGGTGTATGAT
CACGAACTGGAGGACCACGACGATGAAGAATGCGAGGACGCAGTCATCCA
GGAAGAACCAGCCCAGCCTATCGACATTGTAGCATTCGAGGGACAGGAGC
CGCTGCCAAATAATCCGCAAAGAAAGTTGCTTCGCGAACACAGCAGTCCC
ACGGAATTTCCCGTCAGCTCATCCTCCATGCCCAACGCCAGTGACCACTA
CGACTATGAGGATGAGTTAACGGGCGGCCGCTCTCCATCCAAAGTGGCTC
CACTGAAGCGAAAGTATCCGCCGCTGATGAAGAATACGCTCCATGGAGAG
GCTATGGATCGAAGACTGGCAAGCATTTGTCAGGCTCAGCCGCAGATGAG
TCCCGCCGAGAAAGTCTCCAACTGGGAAACGGCACCCAGGGAAGAGTGGG
CCGATGTCGAGGATGTGGAAGGCTTTGAAGCTGCCTTCAAGCAATATGAG
GCTGTTACCGCATCACTCAAACAGCTTAACTTTGCCGAATTCCGTGAAGC
ACTGGTCCGGAATATGGAGAAGATCAGCCGTGAAATCATGCAAACCTCAG
ACGAATCCACTCAAGAGCTTGCCAGCTCTCAGTCGGCGGAACGGCCGGTG
TATCGTCGCTATTTGCACATTCTGCCCACCGAGGAGACAATTGTGCTAGA
TGATGATGACGACGATTGCTACGAGGTGGTCGGCATGGAAAAAGCCTCTG
TCACCACATTGATACCCGAAGAGGAGCTACAGGATAATCAACAGCCGGAG
GAAGAAGAGATAGTGCTGCCAGTTGTTGATGACATAAAGAACACGGATTC
ACCGAATTTCGAGCAGCGGAACCTTACCAAGGAAACATCTACAGCAGACT
TGGAGAGAAGCGCGCTTACTCAAACGGCGGGTTCATCCGCTGCGAATTTA
GACGCATCCTTATCCCATGCTCAACCTTGTCCAACTGCTCCGGCAGGACT
TACTGATTTTATGCAGGCGAACTTAAGCGACCGTGGGCCATCAGAAGACC
AACAACTAACCAAAGCTGTATTAGATGTTATGCGTCAGCAGGTGCAAACA
ATGCAACAGCAACAGCAGTTTATGGAGCAAAAGATGAACCAACAACCACA
GATGTATCACTACGAGGAACTGCCACAGGCTCCCCAACAGATGCAAATGG
AAGGGAATCAGGGGCCTTACGTTAAGTATCCGAATGAGCAACAGGAATTC
TGCAACTATCTGGGTCTCACCGAACTGTCAACAGCAAATGCCGTGGCTAC
CGCAATGAGGGAACTAGCCAACAGCACTATCCCTCGCCGATCGCTGCGGG
TGAGACCACAACAGCAACTGGACAGGATGCGTAGTGATGTGCGTGGCAAG
CGGCGCGAAAGGGAGCGAGATAGGCAGCAGGATAAGGACAAGAAGATACC
GTTGACCACAAGTAGTGAGCTTAGCACCGATAAAGAAGAACCCTCCCCGC
CTCAGACATCAGAATCCGTTTCAAGGATGGCGGGGGATGCGGATGTCCAT
TTCAACTCTCAAATGCCTGCAGAGCATAAGCGAAAACTGAATCACTTGTA
CAACTCTTATTTTGCGGAAGAGGAAGAATGCTCTACGAAGAGGTCACCCA
AAACCACCGACTTTATAGCCAGTTCCAAGTCCTTAAAGGATGTAGAGAGG
CGTCCATCGCTCAAAGGACAGGAGCCGCAACGTCATAGATCCATCATTGA
TGGCGACGGCTATCAGAAACATCAGATAGACAATGAGTCTGAGAAGGGTC
GGGTTCAGTCCGTTGAGGCGGCTTTTACTAAGATCTTCGAGGCTGCCGCA
CCTGCCCAATCCAAGCTGCTGGAGAGCATGCAGCAACGCTTGCGCCAGGC
GCGTGAGACGAAGCCATCAATTTATATTATTAAGGCTACAAGCAATGCCT
CGCCCCCGAATCCATCACACAGCAGGCAGGAGTCTCACATCTCACCGGCG
CCCTTGAACTTAATCGGCGGCTTTGGTGACGTAAGCGCGCCGCATCCTTC
TGTCATTTCCCAGCCAGCGAAGAAAAGTCCTACAATAACCAGTCCAGATA
AGGAAACTCCAGCCCCCTTACCAGTTGATACACCCAAAAAATCAAAACAT
AGGAAAACCCATGGAGCCACCAAACCTGTTGCCGCTACACCACGACGCCG
CACTACAATGGGTGCATCCAGTCTCGGGAACGAAGCACGTGCACGCGATT
TGGTTACCCGCTCCACCACGCATCTTAATTCGAAGCTACTTCGTAGCCGC
AAGGTTAGTCTGCTCAAGAGCTACGCCCTGTCGGACGAAATGGCTCAGGG
ACGATCGAAACGGATGGCTGGCGGTGCAGCACAAACCACCAAAAAGGCTC
CAATGCCCAAGGCAGCACGGACGTCGTTAAAGAAGCCGGCAGATAAAAGT
CTTCCTGAGCAACATCGCTTGGAGCAACAGCAATTGGCTCCGCCAAACTC
TCCCCGAAAGATGAAAGGTGTCAAGGAGACTGAAACTGACACGACAAGTG
CAATGAAATCTAGTCGCCTTACTAAACGGACCAAGCGAGCACGAGCCAAG
TCACTGCCTTCGAATATTGAAAGGGTGACTGAGCCTGTGGCAGCCGTTCC
TAATGCCAATGTATTGAGGCTCGCTGACCTGGCACCAGAAGTGCCCAACA
CATTCGCGCCTACACACAGCCATCTGGTCAACTCCACAGCCAAAGAAGCC
GCTGACAAGACCTTCGTTCATTCCCCCTCCGTCGCTCAATCGCCTTATGC
ACAGCCCGTGCTTATTTACCCGCCATCCCCAACAACACCGCCACCGAATA
CGGAGCCACATCGCCCTCGCCAGCAAGCCGGAAAAGTCAATCCAGCTGAC
TTAGTCCTGGCCACCCCTCCTGGGGGCCTGCTGCGACTCAGTCAGGGATC
CGCGACGCTAGCAAATCCACTTTCTGCCAAGCACGGCCAGGTTCTCTATA
TGTACTACGAGCTGGAACAGCTCATTGTGCTGCAGGAGAATTGCATTACC
TTCTGGAAGTACTCCAAAGTGTTCAACGTGCTGCATCAACCGCGACATAA
TCCCTCCTTTGATGGCGCCAGAAAATCTCCATCTCCAAAGCTGCCTCAAA
CACCTTCGCGCGAGCCCAAAGACGTCGAGCAGGAGTTGAAAATGGGCCCG
CGATGGGTTTACCTGGGCAGAGTGCGGCGCCTGACTAGCGAGAAAGAGAT
CTTTACGCCGTTTGGCAGCCGCATTTGCGTGCACAATTCGACGCCGGTGT
ACCTGGAAATGCGAAGCAGGCCGCTGGACCATCACAAGAGGGAGGTGAAG
CTAACCTCGCTACATGTGAATGTGTATTACTTCTGCGAGGAGGAACTACG
ACCCCGTATGCACTCTGTGCACTTGGATGCTGTCAATTGCGAATGGCCGC
ATGTCATATACACAACTATAGCGGATTCGCGTTACTTCGTTATGGCATGG
CAGCAGGAACTGGTGATGGGCAAGTCGCGCTCGGGCATTTGCAAATATTC
ACTGACGCCCACGCTGGATACGCTGGCCTCCATACGGGAGTTTAAGCAGT
TGCGCCACGAGCTGCGTCACATTGAGTGCCTTTCAGAGGATCGCCTTATC
GGCTACGGCCAGATGCGCATCACCGTCTGGGATCATCGCAGCGGCGATAC
TCTGATGAACTACGACTTGGGCCGGCCGCTGGGCCGTTGCCTGGCTGCTA
CGCACTATCCTAGCCTCGACTTGGACCAAAGCAGCATGCTGGTGCTTTAT
CAGCTGCTTAAAGAACCAAACAAACCGTCTGAGGTGCATGTGATCGCCTG
TGAGCTTTCCCATGCCACGCCCTCGCACCGCCTGCTGCAGGTCCACCGCT
TACCATCGCCGCAATTCGACGATGCCACGGAGGGCGTTAACACCGGTGAT
CATCTGATCATCAAGTCAGCATCGAACGACGAAGCCTGGATAAGTGCCGC
CGATCCGAGACAGCTAACCTATTTGGCGCCGCAAATCAATGGAGCTCAGC
GTTTTTATGCCCGCCACAAGTCCCAAGTGATCGAGATGTCCCCGCAATCC
CTAACTGTAGATAGTATCGCCAATCACATGTTGAAATTGGCTGTCCAGCA
GACCCAATCGGCGTAGAAGCTTTCTAGACCAT
BS11109.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:25:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16972-RA | 5133 | CG16972-PA | 1..5133 | 34..5166 | 25665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16972-RA | 5882 | CG16972-RA | 296..5429 | 34..5167 | 25670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13198603..13200654 | 4240..2189 | 10260 | 100 | Minus |
| 2L | 23513712 | 2L | 13200711..13202409 | 2188..490 | 8495 | 100 | Minus |
| 2L | 23513712 | 2L | 13197555..13198283 | 5167..4439 | 3645 | 100 | Minus |
| 2L | 23513712 | 2L | 13202544..13203000 | 490..34 | 2285 | 100 | Minus |
| 2L | 23513712 | 2L | 13198345..13198544 | 4439..4240 | 1000 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 05:25:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6914 | 2039..2215 | 173 | 58.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2957 | 2086..2247 | 143 | 58.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6999 | 2103..2372 | 130 | 55.7 | Plus |
BS11109.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-16 10:44:01 Download gff for
BS11109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-RA | 266..5402 | 30..5166 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:28 Download gff for
BS11109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-RA | 292..5428 | 30..5166 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:10:52 Download gff for
BS11109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16972-RA | 292..5428 | 30..5166 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:10:52 Download gff for
BS11109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13198345..13198543 | 4241..4439 | 100 | <- | Minus |
| 2L | 13197556..13198282 | 4440..5166 | 100 | <- | Minus |
| 2L | 13198603..13200654 | 2189..4240 | 100 | <- | Minus |
| 2L | 13200711..13202408 | 491..2188 | 100 | <- | Minus |
| 2L | 13202544..13203002 | 30..490 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:28 Download gff for
BS11109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13197556..13198282 | 4440..5166 | 100 | <- | Minus |
| arm_2L | 13198345..13198543 | 4241..4439 | 100 | <- | Minus |
| arm_2L | 13198603..13200654 | 2189..4240 | 100 | <- | Minus |
| arm_2L | 13200711..13202408 | 491..2188 | 100 | <- | Minus |
| arm_2L | 13202544..13203002 | 30..490 | 99 | | Minus |
BS11109.pep Sequence
Translation from 33 to 5165
> BS11109.pep
MSRREASLMAYVAAEEHLLNRYSPLEGDEIDTASEAPGDASDVAEDREYP
TDLVASVTRSSRTGADLDPAVDSNLHVISDDSDTHSFISSGSGFKGWPEE
QPSSSFVPQNEPLIFGLRRQMMMTEETHQAPVWATCTPAKRSYSSHEVIE
INDSPESVQDPGIALSPGMLLTNGNVDQFEMLSHENDEAEHELQVAEEGE
QCVIYEAVDGENMVVLGEEHCCEIIVATQGVACEQEFARAIMMAGNGTGA
LLGLLSEESDANECLNGTAYIEEVVEDMGVAEARLAAGNNVYLSDAALEQ
PLVHQDLVDDEAPEENENATFLDDTPMEEERPDICQVYDHELEDHDDEEC
EDAVIQEEPAQPIDIVAFEGQEPLPNNPQRKLLREHSSPTEFPVSSSSMP
NASDHYDYEDELTGGRSPSKVAPLKRKYPPLMKNTLHGEAMDRRLASICQ
AQPQMSPAEKVSNWETAPREEWADVEDVEGFEAAFKQYEAVTASLKQLNF
AEFREALVRNMEKISREIMQTSDESTQELASSQSAERPVYRRYLHILPTE
ETIVLDDDDDDCYEVVGMEKASVTTLIPEEELQDNQQPEEEEIVLPVVDD
IKNTDSPNFEQRNLTKETSTADLERSALTQTAGSSAANLDASLSHAQPCP
TAPAGLTDFMQANLSDRGPSEDQQLTKAVLDVMRQQVQTMQQQQQFMEQK
MNQQPQMYHYEELPQAPQQMQMEGNQGPYVKYPNEQQEFCNYLGLTELST
ANAVATAMRELANSTIPRRSLRVRPQQQLDRMRSDVRGKRRERERDRQQD
KDKKIPLTTSSELSTDKEEPSPPQTSESVSRMAGDADVHFNSQMPAEHKR
KLNHLYNSYFAEEEECSTKRSPKTTDFIASSKSLKDVERRPSLKGQEPQR
HRSIIDGDGYQKHQIDNESEKGRVQSVEAAFTKIFEAAAPAQSKLLESMQ
QRLRQARETKPSIYIIKATSNASPPNPSHSRQESHISPAPLNLIGGFGDV
SAPHPSVISQPAKKSPTITSPDKETPAPLPVDTPKKSKHRKTHGATKPVA
ATPRRRTTMGASSLGNEARARDLVTRSTTHLNSKLLRSRKVSLLKSYALS
DEMAQGRSKRMAGGAAQTTKKAPMPKAARTSLKKPADKSLPEQHRLEQQQ
LAPPNSPRKMKGVKETETDTTSAMKSSRLTKRTKRARAKSLPSNIERVTE
PVAAVPNANVLRLADLAPEVPNTFAPTHSHLVNSTAKEAADKTFVHSPSV
AQSPYAQPVLIYPPSPTTPPPNTEPHRPRQQAGKVNPADLVLATPPGGLL
RLSQGSATLANPLSAKHGQVLYMYYELEQLIVLQENCITFWKYSKVFNVL
HQPRHNPSFDGARKSPSPKLPQTPSREPKDVEQELKMGPRWVYLGRVRRL
TSEKEIFTPFGSRICVHNSTPVYLEMRSRPLDHHKREVKLTSLHVNVYYF
CEEELRPRMHSVHLDAVNCEWPHVIYTTIADSRYFVMAWQQELVMGKSRS
GICKYSLTPTLDTLASIREFKQLRHELRHIECLSEDRLIGYGQMRITVWD
HRSGDTLMNYDLGRPLGRCLAATHYPSLDLDQSSMLVLYQLLKEPNKPSE
VHVIACELSHATPSHRLLQVHRLPSPQFDDATEGVNTGDHLIIKSASNDE
AWISAADPRQLTYLAPQINGAQRFYARHKSQVIEMSPQSLTVDSIANHML
KLAVQQTQSA*
BS11109.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:29:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16972-PA | 1710 | CG16972-PA | 1..1710 | 1..1710 | 8865 | 100 | Plus |
