Clone Sequence Records
BS11165.5prime Sequence
312 bp (311 high quality bases) assembled on 2006-04-19
> BS11165.5prime
GAAGTTATCAGTCGACATGAAAGCAGCTTTAGTCCTTCTCTTCCTGACCC
TCTGCGTTGCCATCTACGCCGACCTTGACTGCAATCCCGATGGCAATGGT
GAGCCCGATTGCGTGGGACGCTCCGGAGAGATTTCCCGTGACTTCTGGGA
TCCAACCCACTACTGGCAGTGCTCTAGCACCGGACAGGCCGAGCTAGTTG
CCTGCGAGCAGAACACTGGATTCGATCCGAAAACTGGAAGCTGCGTCGAT
TGGAGCGTTTGGCAGTGGTATCCTCCATGTTCCGAAGCATCCACTTAAAA
GCTTTCTAGACC
BS11165.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:03:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31893-PA | 282 | Peritrophin-15b-RA | 1..282 | 17..298 | 1410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:58:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-RC | 428 | CG31893-RC | 60..341 | 17..298 | 1410 | 100 | Plus |
| Peritrophin-15b-RA | 337 | CG31893-RA | 33..314 | 17..298 | 1410 | 100 | Plus |
| Peritrophin-15b-RB | 331 | CG31893-RB | 41..308 | 31..298 | 1340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:58:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8394533..8394807 | 298..24 | 1375 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:58:37 has no hits.
BS11165.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:00:40 Download gff for
BS11165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31893-PA | 1..282 | 17..298 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:28:33 Download gff for
BS11165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31893-PA | 1..282 | 17..298 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 20:35:04 Download gff for
BS11165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 19..311 | 9..302 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:25:34 Download gff for
BS11165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 24..316 | 9..302 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:25:34 Download gff for
BS11165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8394531..8394812 | 18..302 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 20:35:04 Download gff for
BS11165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8394531..8394812 | 18..302 | 97 | | Minus |
BS11165.3prime Sequence
312 bp (311 high quality bases) assembled on 2006-04-19
> BS11165.3prime
ATGGTCTAGAAAGCTTTTAAGTGGATGCTTCGGAACATGGAGGATACCAC
TGCCAAACGCTCCAATCGACGCAGCTTCCAGTTTTCGGATCGAATCCAGT
GTTCTGCTCGCAGGCAACTAGCTCGGCCTGTCCGGTGCTAGAGCACTGCC
AGTAGTGGGTTGGATCCCAGAAGTCACGGGAAATCTCTCCGGAGCGTCCC
ACGCAATCGGGCTCACCATTGCCATCGGGATTGCAGTCAAGGTCGGCGTA
GATGGCAACGCAGAGGGTCAGGAAGAGAAGGACTAAAGCTGCTTTCATGT
CGACTGATAACT
BS11165.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:03:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31893-PA | 282 | Peritrophin-15b-RA | 1..282 | 298..17 | 1410 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:51:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-RC | 428 | CG31893-RC | 60..341 | 298..17 | 1410 | 100 | Minus |
| Peritrophin-15b-RA | 337 | CG31893-RA | 33..314 | 298..17 | 1410 | 100 | Minus |
| Peritrophin-15b-RB | 331 | CG31893-RB | 41..308 | 284..17 | 1340 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:51:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8394533..8394807 | 17..291 | 1375 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:51:13 has no hits.
BS11165.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:00:39 Download gff for
BS11165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31893-PA | 1..282 | 17..298 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:28:31 Download gff for
BS11165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31893-PA | 1..282 | 17..298 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 15:54:11 Download gff for
BS11165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 19..311 | 13..306 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:13:10 Download gff for
BS11165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 24..316 | 13..306 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:13:10 Download gff for
BS11165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8394531..8394812 | 13..297 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 15:54:11 Download gff for
BS11165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8394531..8394812 | 13..297 | 97 | | Plus |
BS11165.complete Sequence
314 bp assembled on 2006-11-01
GenBank Submission: FJ636773
> BS11165.complete
GAAGTTATCAGTCGACATGAAAGCAGCTTTAGTCCTTCTCTTCCTGACCC
TCTGCGTTGCCATCTACGCCGACCTTGACTGCAATCCCGATGGCAATGGT
GAGCCCGATTGCGTGGGACGCTCCGGAGAGATTTCCCGTGACTTCTGGGA
TCCAACCCACTACTGGCAGTGCTCTAGCACCGGACAGGCCGAGCTAGTTG
CCTGCGAGCAGAACACTGGATTCGATCCGAAAACTGGAAGCTGCGTCGAT
TGGAGCGTTTGGCAGTGGTATCCTCCATGTTCCGAAGCATCCACTTAAAA
GCTTTCTAGACCAT
BS11165.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:30:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-RC | 282 | CG31893-PC | 1..282 | 17..298 | 1410 | 100 | Plus |
| Peritrophin-15b-RA | 282 | CG31893-PA | 1..282 | 17..298 | 1410 | 100 | Plus |
| Peritrophin-15b-RB | 276 | CG31893-PB | 9..276 | 31..298 | 1340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:30:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-RC | 428 | CG31893-RC | 60..341 | 17..298 | 1410 | 100 | Plus |
| Peritrophin-15b-RA | 337 | CG31893-RA | 33..314 | 17..298 | 1410 | 100 | Plus |
| Peritrophin-15b-RB | 331 | CG31893-RB | 41..308 | 31..298 | 1340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:30:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8394533..8394807 | 298..24 | 1375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:30:02 has no hits.
BS11165.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:42 Download gff for
BS11165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 1..282 | 17..298 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:14:54 Download gff for
BS11165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 1..282 | 17..298 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:51 Download gff for
BS11165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 28..307 | 17..296 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:43 Download gff for
BS11165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 1..282 | 17..298 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:19:52 Download gff for
BS11165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 33..312 | 17..296 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:19:52 Download gff for
BS11165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8394535..8394812 | 18..296 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:51 Download gff for
BS11165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8394535..8394812 | 18..296 | 98 | | Minus |
BS11165.pep Sequence
Translation from 16 to 297
> BS11165.pep
MKAALVLLFLTLCVAIYADLDCNPDGNGEPDCVGRSGEISRDFWDPTHYW
QCSSTGQAELVACEQNTGFDPKTGSCVDWSVWQWYPPCSEAST*
BS11165.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-PC | 93 | CG31893-PC | 1..93 | 1..93 | 535 | 100 | Plus |
| Peritrophin-15b-PA | 93 | CG31893-PA | 1..93 | 1..93 | 535 | 100 | Plus |
| Peritrophin-15b-PB | 91 | CG31893-PB | 1..91 | 1..93 | 514 | 97.8 | Plus |
| Peritrophin-15a-PA | 92 | CG17814-PA | 1..92 | 1..88 | 201 | 44.6 | Plus |
| CG14244-PB | 106 | CG14244-PB | 50..95 | 45..90 | 137 | 51.1 | Plus |
