Clone Sequence Records
BS11268.3prime Sequence
654 bp (653 high quality bases) assembled on 2006-04-18
> BS11268.3prime
ATGGTCTAGAAAGCTTCTATGAGCGCGGCGTGCTCTCCAAGTCCTTGATC
TGGCGCAGGATCTCTGACTTCTTTTTCACCTTGTCCAGCTGGTCCTTGTC
CAGCTTCTTCTGCTCGCCGGCCTGGATCCTGCTCTCGATCTGTTCGATTT
CCCGGATTTTCTTGCGCAGCTTCTTCAACTGCTTGGCAGGGTCCACCACC
TCCTGGGCGGCGTCCAGTTTCAGGGTGTCCTCCAGTGTCTTGGATATCGA
GTTGATGTCCCGGCTGCCAGAGGGCTGCTGTTGCTGCTGCTGCTGCTGCT
GACTGACTTTGGGTGGCGGACACGTGCTGGGCGGCATAACCAGGACGCCG
GGCGCCGGCGCCTTTGGCTGCCTGCCGGATTCCTTCTCCTGCTTCTTGGC
CCTGGTGCGCTCCTGCTTCTCGCGCTCCTTCTTGGACTCGGCGGCCAGCA
GGGGACACATGCCAGGCGGCACTCCGGCCTGGCGCTGCGCCACGAACTGC
TTGCCCTTGCTCTCGTAGAGTGGCACCTCCTCCTGCGGCACGTAGCCGTC
CTTGACGCGCCGCGCCTTGCGCCAGGTGCCATCCGGCCGCTTGGTGGCCG
GAATGAACTTGCCCTCGCTGCTCTGTAGGTACGTGCTCATGTCGACTGAT
AACT
BS11268.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:05:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30176-PA | 624 | wibg-RA | 1..624 | 640..17 | 3120 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 17:49:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pym-RA | 983 | CG30176-RA | 55..678 | 640..17 | 3120 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 17:49:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23856259..23856882 | 17..640 | 3120 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 17:49:12 has no hits.
BS11268.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:03:50 Download gff for
BS11268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-PA | 1..624 | 17..640 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:32:38 Download gff for
BS11268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30176-PA | 1..624 | 17..640 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:38:03 Download gff for
BS11268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 48..678 | 17..648 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 19:04:46 Download gff for
BS11268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pym-RA | 48..678 | 17..648 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 19:04:46 Download gff for
BS11268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23856259..23856889 | 17..648 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:38:03 Download gff for
BS11268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19743782..19744412 | 17..648 | 99 | | Plus |
BS11268.5prime Sequence
654 bp (653 high quality bases) assembled on 2006-04-18
> BS11268.5prime
GAAGTTATCAGTCGACATGAGCACGTACCTACAGAGCAGCGAGGGCAAGT
TCATTCCGGCCACCAAGCGGCCGGATGGCACCTGGCGCAAGGCGCGGCGC
GTCAAGGACGGCTACGTGCCGCAGGAGGAGGTGCCACTCTACGAGAGCAA
GGGCAAGCAGTTCGTGGCGCAGCGCCAGGCCGGAGTGCCGCCTGGCATGT
GTCCCCTGCTGGCCGCCGAGTCCAAGAAGGAGCGCGAGAAGCAGGAGCGC
ACCAGGGCCAAGAAGCAGGAGAAGGAATCCGGCAGGCAGCCAAAGGCGCC
GGCGCCCGGCGTCCTGGTTATGCCGCCCAGCACGTGTCCGCCACCCAAAG
TCAGTCAGCAGCAGCAGCAGCAGCAACAGCAGCCCTCTGGCAGCCGGGAC
ATCAACTCGATATCCAAGACACTGGAGGACACCCTGAAACTGGACGCCGC
CCAGGAGGTGGTGGACCCTGCCAAGCAGTTGAAGAAGCTGCGCAAGAAAA
TCCGGGAAATCGAACAGATCGAGAGCAGGATCCAGGCCGGCGAGCAGAAG
AAGCTGGACAAGGACCAGCTGGACAAGGTGAAAAAGAAGTCAGAGATCCT
GCGCCAGATCAAGGACTTGGAGAGCACGCCGCGCTCATAGAAGCTTTCTA
GACC
BS11268.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:05:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30176-PA | 624 | wibg-RA | 1..624 | 17..640 | 3120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:44:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pym-RA | 983 | CG30176-RA | 55..678 | 17..640 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:44:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23856259..23856882 | 640..17 | 3120 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:44:18 has no hits.
BS11268.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:03:51 Download gff for
BS11268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-PA | 1..624 | 17..640 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:32:40 Download gff for
BS11268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30176-PA | 1..624 | 17..640 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 18:35:56 Download gff for
BS11268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 48..678 | 9..640 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:47:10 Download gff for
BS11268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pym-RA | 48..678 | 9..640 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:47:10 Download gff for
BS11268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23856259..23856889 | 9..640 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 18:35:56 Download gff for
BS11268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19743782..19744412 | 9..640 | 99 | | Minus |
BS11268.complete Sequence
656 bp assembled on 2007-10-17
GenBank Submission: FJ636802
> BS11268.complete
GAAGTTATCAGTCGACATGAGCACGTACCTACAGAGCAGCGAGGGCAAGT
TCATTCCGGCCACCAAGCGGCCGGATGGCACCTGGCGCAAGGCGCGGCGC
GTCAAGGACGGCTACGTGCCGCAGGAGGAGGTGCCACTCTACGAGAGCAA
GGGCAAGCAGTTCGTGGCGCAGCGCCAGGCCGGAGTGCCGCCTGGCATGT
GTCCCCTGCTGGCCGCCGAGTCCAAGAAGGAGCGCGAGAAGCAGGAGCGC
ACCAGGGCCAAGAAGCAGGAGAAGGAATCCGGCAGGCAGCCAAAGGCGCC
GGCGCCCGGCGTCCTGGTTATGCCGCCCAGCACGTGTCCGCCACCCAAAG
TCAGTCAGCAGCAGCAGCAGCAGCAACAGCAGCCCTCTGGCAGCCGGGAC
ATCAACTCGATATCCAAGACACTGGAGGACACCCTGAAACTGGACGCCGC
CCAGGAGGTGGTGGACCCTGCCAAGCAGTTGAAGAAGCTGCGCAAGAAAA
TCCGGGAAATCGAACAGATCGAGAGCAGGATCCAGGCCGGCGAGCAGAAG
AAGCTGGACAAGGACCAGCTGGACAAGGTGAAAAAGAAGTCAGAGATCCT
GCGCCAGATCAAGGACTTGGAGAGCACGCCGCGCTCATAGAAGCTTTCTA
GACCAT
BS11268.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:48:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pym-RA | 624 | CG30176-PA | 1..624 | 17..640 | 3120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:48:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pym-RA | 983 | CG30176-RA | 55..678 | 17..640 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:48:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23856259..23856882 | 640..17 | 3120 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:48:57 has no hits.
BS11268.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:13:51 Download gff for
BS11268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 1..624 | 17..640 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:44:36 Download gff for
BS11268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 46..676 | 9..640 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:34 Download gff for
BS11268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 55..678 | 17..640 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:43:29 Download gff for
BS11268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wibg-RA | 53..676 | 17..640 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:53:22 Download gff for
BS11268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pym-RA | 55..678 | 17..640 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:53:22 Download gff for
BS11268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23856259..23856882 | 17..640 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:34 Download gff for
BS11268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19743782..19744405 | 17..640 | 100 | | Minus |
BS11268.pep Sequence
Translation from 16 to 639
> BS11268.pep
MSTYLQSSEGKFIPATKRPDGTWRKARRVKDGYVPQEEVPLYESKGKQFV
AQRQAGVPPGMCPLLAAESKKEREKQERTRAKKQEKESGRQPKAPAPGVL
VMPPSTCPPPKVSQQQQQQQQQPSGSRDINSISKTLEDTLKLDAAQEVVD
PAKQLKKLRKKIREIEQIESRIQAGEQKKLDKDQLDKVKKKSEILRQIKD
LESTPRS*
BS11268.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:32:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pym-PA | 207 | CG30176-PA | 1..207 | 1..207 | 1051 | 100 | Plus |
