Clone Sequence Records
BS11334.3prime Sequence
875 bp (820 high quality bases) assembled on 2006-04-18
> BS11334.3prime
ATGGTCTAGAAAGCTTTTAGAAGCACTTGCGGTGCACAATGGAGGGGCCG
GACTCGTCGTACTCCTGCTTGGAGATCCACATCTGCTGGAAGGTGGACAG
CGAAGCCAGGATGGAGCCACCGATCCAGACAGAGTACTTGCGCTCTGGCG
GGGCAATGATCTTGATCTTCATGGTCGACGGTGCCAGGGCGGTGATCTCC
TTCTGCATACGGTCGGCGATGCCAGGGTACATGGTGGTGCCACCGGACAG
CACGGTGTTGGCATACAGATCCTTACGGATATCCACATCACACTTCATGA
TGGAGTTGTAGGTGGTCTCGTGGATGCCGCAAGCCTCCATTCCCAAGAAC
GAGGGCTGGAACAGGGCCTCGGGGCAGCGGAAACGCTCGTTGCCGATGGT
GATCACCTGTCCGTCGGGCAGCTCGTAGGACTTCTCCAACGAGGAGCTGC
TGGCAGCGGTGGCCATCTCCTGCTCAAAGTCGAGGGCAACATAGCACAGC
TTCTCCTTGATGTCACGGACGATTTCACGCTCAGCGGTGGTGGTGAAAGA
GTAACCGCGCTCGGTCAGGATCTTCATCAGGTAGTCGGTCAAATCGCGAC
CAGCCAGATCCAGACGCAGGATGGCATGGGGAAGGGCATAACCCTCGTAG
ATGGGCACGGTGTGGGAGACACCATCGCCGGAGTCCAGAACGATACCGGT
GGTACGACCGGAGGCGTACAGCGAGAGCACAGCCTGGATGGCCACATACA
TGGCGGGTGTGTTTGAAGGTCTCGAACATGATCTGGGTCATCTTCTCACG
GTTGGCCTTGGGGTTCAGCGGGGCCTCGGTCAGCAGCACGGGGTGCTCCT
CGGGTGCCACACGCAGCTCATTGTA
BS11334.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:06:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4027-PB | 1131 | Act5C-RB | 385..1131 | 763..17 | 3735 | 100 | Minus |
| CG4027-PA | 1131 | Act5C-RA | 385..1131 | 763..17 | 3735 | 100 | Minus |
| CG4027-PC | 1131 | Act5C-RC | 385..1131 | 763..17 | 3735 | 100 | Minus |
| CG4027-PD | 1131 | Act5C-RD | 385..1131 | 763..17 | 3735 | 100 | Minus |
| CG18290-PA | 1131 | Act87E-RA | 389..692 | 759..456 | 1220 | 96 | Minus |
| CG18290-PB | 1131 | Act87E-RB | 389..692 | 759..456 | 1220 | 96 | Minus |
| CG10067-PA | 1131 | Act57B-RA | 391..692 | 757..456 | 1135 | 95 | Minus |
| CG10067-PA | 1131 | Act57B-RA | 817..1103 | 331..45 | 835 | 91.6 | Minus |
| CG18290-PA | 1131 | Act87E-RA | 838..1103 | 310..45 | 830 | 92.4 | Minus |
| CG18290-PB | 1131 | Act87E-RB | 838..1103 | 310..45 | 830 | 92.4 | Minus |
| CG12051-PA | 1131 | Act42A-RA | 784..1131 | 364..17 | 815 | 89.3 | Minus |
| CG5178-PA | 1131 | Act88F-RA | 704..995 | 444..153 | 710 | 89.7 | Minus |
| CG7478-PA | 1131 | Act79B-RA | 844..1100 | 304..48 | 685 | 90.6 | Minus |
| CG7478-PA | 1131 | Act79B-RA | 394..593 | 754..555 | 575 | 91.5 | Minus |
| CG4027-PB | 1131 | Act5C-RB | 274..386 | 875..763 | 565 | 100 | Minus |
| CG4027-PA | 1131 | Act5C-RA | 274..386 | 875..763 | 565 | 100 | Minus |
| CG4027-PC | 1131 | Act5C-RC | 274..386 | 875..763 | 565 | 100 | Minus |
| CG4027-PD | 1131 | Act5C-RD | 274..386 | 875..763 | 565 | 100 | Minus |
| CG5178-PA | 1131 | Act88F-RA | 394..506 | 754..642 | 415 | 94.6 | Minus |
| CG5178-PA | 1131 | Act88F-RA | 1009..1104 | 139..44 | 405 | 96.8 | Minus |
| CG7478-PA | 1131 | Act79B-RA | 274..386 | 875..763 | 365 | 92.9 | Minus |
| CG12051-PA | 1131 | Act42A-RA | 394..597 | 754..551 | 345 | 86.7 | Minus |
| CG10067-PA | 1131 | Act57B-RA | 710..812 | 438..336 | 340 | 93.2 | Minus |
| CG10067-PA | 1131 | Act57B-RA | 274..386 | 875..763 | 340 | 92 | Minus |
| CG18290-PA | 1131 | Act87E-RA | 295..386 | 854..763 | 335 | 94.5 | Minus |
| CG18290-PB | 1131 | Act87E-RB | 295..386 | 854..763 | 335 | 94.5 | Minus |
| CG18290-PA | 1131 | Act87E-RA | 710..812 | 438..336 | 315 | 92.2 | Minus |
| CG18290-PB | 1131 | Act87E-RB | 710..812 | 438..336 | 315 | 92.2 | Minus |
| CG7478-PA | 1131 | Act79B-RA | 710..834 | 438..314 | 275 | 88.8 | Minus |
| CG5178-PA | 1131 | Act88F-RA | 511..593 | 637..555 | 265 | 92.7 | Minus |
| CG5178-PA | 1131 | Act88F-RA | 601..696 | 547..452 | 255 | 90.6 | Minus |
| CG5178-PA | 1131 | Act88F-RA | 317..386 | 832..763 | 250 | 94.2 | Minus |
| CG12051-PA | 1131 | Act42A-RA | 601..689 | 547..459 | 220 | 89.8 | Minus |
| CG7478-PA | 1131 | Act79B-RA | 634..689 | 514..459 | 180 | 92.8 | Minus |
| CG12051-PA | 1131 | Act42A-RA | 710..779 | 438..369 | 150 | 88.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:19:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Act5C-RE | 2863 | CG4027-RE | 435..1292 | 875..17 | 4270 | 99.9 | Minus |
| Act5C-RD | 1928 | CG4027-RD | 435..1292 | 875..17 | 4270 | 99.9 | Minus |
| Act5C-RC | 2252 | CG4027-RC | 435..1292 | 875..17 | 4270 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:19:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5902971..5903828 | 875..17 | 4245 | 99.9 | Minus |
| 3R | 32079331 | 3R | 13426883..13427734 | 869..17 | 3165 | 91.7 | Minus |
| 2R | 25286936 | 2R | 20945077..20945934 | 875..17 | 3150 | 91.4 | Minus |
| 3R | 32079331 | 3R | 15440889..15441541 | 875..222 | 2140 | 88.8 | Minus |
| 3R | 32079331 | 3R | 15441607..15441807 | 217..17 | 705 | 90 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:19:50 has no hits.
BS11334.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:05:52 Download gff for
BS11334.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4027-PC | 275..1131 | 17..874 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:35:15 Download gff for
BS11334.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4027-PC | 275..1131 | 17..874 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:26:52 Download gff for
BS11334.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act5C-RA | 436..1296 | 14..874 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:45:02 Download gff for
BS11334.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act5C-RC | 436..1296 | 14..874 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:45:02 Download gff for
BS11334.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5902972..5903832 | 14..874 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:26:52 Download gff for
BS11334.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5797005..5797865 | 14..874 | 99 | | Minus |
BS11334.5prime Sequence
901 bp (788 high quality bases) assembled on 2006-04-18
> BS11334.5prime
GAAGTTATCAGTCGACATGTGTGACGAAGAAGTTGCTGCTCTGGTTGTCG
ACAACGGCTCTGGCATGTGCAAGGCCGGATTTGCCGGAGACGATGCTCCC
CGCGCCGTCTTCCCATCGATTGTGGGACGTCCCCGTCACCAGGGTGTGAT
GGTCGGCATGGGCCAGAAGGACTCGTACGTGGGTGATGAGGCGCAGAGCA
AGCGTGGTATCCTCACCCTGAAGTACCCCATTGAGCACGGTATCGTGACC
AACTGGGACGATATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCT
GCGTGTGGCACCCGAGGAGCACCCCGTGCTGCTGACCGAGGCCCCGCTGA
ACCCCAAGGCCAACCGTGAGAAGATGACCCAGATCATGTTCGAGACCTTC
AACACACCCGCCATGTATGTGGCCATCCAGGCTGTGCTCTCGCTGTACGC
CTCCGGTCGTACCACCGGTATCGTTCTGGACTCCGGCGATGGTGTCTCCC
ACACCGTGCCCATCTACGAGGGTTATGCCCTTCCCCATGCCATCCTGCGT
CTGGATCTGGCTGGTCGCGATTTGACCGACTACCTGATGAAGATCCTGAC
CGAGCGCGGTTACTCTTTCACCACCACCGCTGAGCGTGAAATCGTCCGTG
ACATCAAGGAGAAGCTGTGCTATGTTGCCCTCGACTTTGAGCAGGAGATG
GCCACCGCTGCCAGCAGCTCCTCGTTGGAGAAGTCCTACGAGCTGCCCGA
CGGACAGGTGATCACCATCGGCAACGAGCGTTTCCGCTGCCCCGAGGCCC
TGTTCCAGCCCTCGTTCTTGGGAATGGAGGCTTGCGGCATCCACGAGACC
ACCTACAACTCCATCATGAAATGTGATGTGGATATCCGTAGGGATCTGTA
T
BS11334.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:06:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4027-PB | 1131 | Act5C-RB | 1..885 | 17..901 | 4375 | 99.7 | Plus |
| CG4027-PA | 1131 | Act5C-RA | 1..885 | 17..901 | 4375 | 99.7 | Plus |
| CG4027-PC | 1131 | Act5C-RC | 1..885 | 17..901 | 4375 | 99.7 | Plus |
| CG4027-PD | 1131 | Act5C-RD | 1..885 | 17..901 | 4375 | 99.7 | Plus |
| CG18290-PA | 1131 | Act87E-RA | 49..692 | 65..708 | 2095 | 93 | Plus |
| CG18290-PB | 1131 | Act87E-RB | 49..692 | 65..708 | 2095 | 93 | Plus |
| CG10067-PA | 1131 | Act57B-RA | 121..692 | 137..708 | 1960 | 93.7 | Plus |
| CG7478-PA | 1131 | Act79B-RA | 232..593 | 248..609 | 1035 | 91.4 | Plus |
| CG5178-PA | 1131 | Act88F-RA | 317..506 | 333..522 | 625 | 93.1 | Plus |
| CG5178-PA | 1131 | Act88F-RA | 32..305 | 48..321 | 545 | 87.9 | Plus |
| CG12051-PA | 1131 | Act42A-RA | 112..311 | 128..327 | 450 | 89 | Plus |
| CG12051-PA | 1131 | Act42A-RA | 332..597 | 348..613 | 430 | 86.4 | Plus |
| CG5178-PA | 1131 | Act88F-RA | 704..885 | 720..901 | 385 | 88.4 | Plus |
| CG7478-PA | 1131 | Act79B-RA | 34..197 | 50..213 | 370 | 89 | Plus |
| CG10067-PA | 1131 | Act57B-RA | 710..812 | 726..828 | 340 | 93.2 | Plus |
| CG18290-PA | 1131 | Act87E-RA | 710..812 | 726..828 | 315 | 92.2 | Plus |
| CG18290-PB | 1131 | Act87E-RB | 710..812 | 726..828 | 315 | 92.2 | Plus |
| CG7478-PA | 1131 | Act79B-RA | 710..834 | 726..850 | 275 | 88.8 | Plus |
| CG5178-PA | 1131 | Act88F-RA | 511..593 | 527..609 | 265 | 92.7 | Plus |
| CG5178-PA | 1131 | Act88F-RA | 601..696 | 617..712 | 255 | 90.6 | Plus |
| CG12051-PA | 1131 | Act42A-RA | 601..689 | 617..705 | 220 | 89.8 | Plus |
| CG10067-PA | 1131 | Act57B-RA | 1..98 | 17..114 | 215 | 88.7 | Plus |
| CG10067-PA | 1131 | Act57B-RA | 817..874 | 833..890 | 190 | 93.1 | Plus |
| CG7478-PA | 1131 | Act79B-RA | 634..689 | 650..705 | 180 | 92.8 | Plus |
| CG12051-PA | 1131 | Act42A-RA | 784..884 | 800..900 | 180 | 87.1 | Plus |
| CG12051-PA | 1131 | Act42A-RA | 710..779 | 726..795 | 150 | 88.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:52:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Act5C-RE | 2863 | CG4027-RE | 162..1046 | 17..901 | 4395 | 99.8 | Plus |
| Act5C-RD | 1928 | CG4027-RD | 162..1046 | 17..901 | 4395 | 99.8 | Plus |
| Act5C-RC | 2252 | CG4027-RC | 162..1046 | 17..901 | 4395 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:51:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5902698..5903582 | 17..901 | 4395 | 99.8 | Plus |
| 3R | 32079331 | 3R | 13426604..13427488 | 17..901 | 3165 | 90.5 | Plus |
| 2R | 25286936 | 2R | 20944843..20945687 | 56..900 | 3115 | 91.2 | Plus |
| 3R | 32079331 | 3R | 15440616..15441500 | 17..901 | 2790 | 87.7 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:52:01 has no hits.
BS11334.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:05:53 Download gff for
BS11334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4027-PC | 1..885 | 17..901 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:35:17 Download gff for
BS11334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4027-PA | 1..885 | 17..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:47:30 Download gff for
BS11334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act5C-RA | 162..1046 | 17..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:22:14 Download gff for
BS11334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act5C-RC | 162..1046 | 17..901 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:22:14 Download gff for
BS11334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5902698..5903582 | 17..901 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:47:30 Download gff for
BS11334.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5796731..5797615 | 17..901 | 99 | | Plus |
BS11334.complete Sequence
1163 bp assembled on 2006-11-01
GenBank Submission: FJ636827
> BS11334.complete
GAAGTTATCAGTCGACATGTGTGACGAAGAAGTTGCTGCTCTGGTTGTCG
ACAACGGCTCTGGCATGTGCAAGGCCGGATTTGCCGGAGACGATGCTCCC
CGCGCCGTCTTCCCATCGATTGTGGGACGTCCCCGTCACCAGGGTGTGAT
GGTCGGCATGGGCCAGAAGGACTCGTACGTGGGTGATGAGGCGCAGAGCA
AGCGTGGTATCCTCACCCTGAAGTACCCCATTGAGCACGGTATCGTGACC
AACTGGGACGATATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCT
GCGTGTGGCACCCGAGGAGCACCCCGTGCTGCTGACCGAGGCCCCGCTGA
ACCCCAAGGCCAACCGTGAGAAGATGACCCAGATCATGTTCGAGACCTTC
AACACACCCGCCATGTATGTGGCCATCCAGGCTGTGCTCTCGCTGTACGC
CTCCGGTCGTACCACCGGTATCGTTCTGGACTCCGGCGATGGTGTCTCCC
ACACCGTGCCCATCTACGAGGGTTATGCCCTTCCCCATGCCATCCTGCGT
CTGGATCTGGCTGGTCGCGATTTGACCGACTACCTGATGAAGATCCTGAC
CGAGCGCGGTTACTCTTTCACCACCACCGCTGAGCGTGAAATCGTCCGTG
ACATCAAGGAGAAGCTGTGCTATGTTGCCCTCGACTTTGAGCAGGAGATG
GCCACCGCTGCCAGCAGCTCCTCGTTGGAGAAGTCCTACGAGCTGCCCGA
CGGACAGGTGATCACCATCGGCAACGAGCGTTTCCGCTGCCCCGAGGCCC
TGTTCCAGCCCTCGTTCTTGGGAATGGAGGCTTGCGGCATCCACGAGACC
ACCTACAACTCCATCATGAAGTGTGATGTGGATATCCGTAAGGATCTGTA
TGCCAACACCGTGCTGTCCGGTGGCACCACCATGTACCCTGGCATCGCCG
ACCGTATGCAGAAGGAGATCACCGCCCTGGCACCGTCGACCATGAAGATC
AAGATCATTGCCCCGCCAGAGCGCAAGTACTCTGTCTGGATCGGTGGCTC
CATCCTGGCTTCGCTGTCCACCTTCCAGCAGATGTGGATCTCCAAGCAGG
AGTACGACGAGTCCGGCCCCTCCATTGTGCACCGCAAGTGCTTCTAAAAG
CTTTCTAGACCAT
BS11334.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:26:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Act5C-RE | 1131 | CG4027-PE | 1..1131 | 17..1147 | 5655 | 100 | Plus |
| Act5C-RD | 1131 | CG4027-PD | 1..1131 | 17..1147 | 5655 | 100 | Plus |
| Act5C-RC | 1131 | CG4027-PC | 1..1131 | 17..1147 | 5655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Act5C-RE | 2863 | CG4027-RE | 162..1292 | 17..1147 | 5655 | 100 | Plus |
| Act5C-RD | 1928 | CG4027-RD | 162..1292 | 17..1147 | 5655 | 100 | Plus |
| Act5C-RC | 2252 | CG4027-RC | 162..1292 | 17..1147 | 5655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:26:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5902698..5903828 | 17..1147 | 5655 | 100 | Plus |
| 3R | 32079331 | 3R | 13426604..13427734 | 17..1147 | 4080 | 90.7 | Plus |
| 2R | 25286936 | 2R | 20944843..20945934 | 56..1147 | 4005 | 91.1 | Plus |
| 2R | 25286936 | 2R | 6014270..6015400 | 1147..17 | 3315 | 86.2 | Minus |
| 3R | 32079331 | 3R | 15440616..15441541 | 17..942 | 2965 | 88 | Plus |
| 3L | 28110227 | 3L | 21985349..21986270 | 15..936 | 2885 | 87.5 | Plus |
| 3L | 28110227 | 3L | 21986640..21986843 | 944..1147 | 765 | 91.7 | Plus |
| 3R | 32079331 | 3R | 15441607..15441807 | 947..1147 | 705 | 90 | Plus |
| 2R | 25286936 | 2R | 16774750..16774956 | 335..541 | 210 | 73.4 | Plus |
| 2R | 25286936 | 2R | 16774460..16774558 | 42..140 | 195 | 79.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:26:02 has no hits.
BS11334.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:51:44 Download gff for
BS11334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act5C-RC | 1..1131 | 17..1147 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:55:27 Download gff for
BS11334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act5C-RC | 159..1293 | 17..1150 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:42 Download gff for
BS11334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act5C-RA | 162..1290 | 17..1145 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:51:44 Download gff for
BS11334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act5C-RC | 159..1293 | 17..1150 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:07:35 Download gff for
BS11334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Act5C-RC | 162..1290 | 17..1145 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:07:35 Download gff for
BS11334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5902698..5903826 | 17..1145 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:42 Download gff for
BS11334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5796731..5797859 | 17..1145 | 100 | | Plus |
BS11334.pep Sequence
Translation from 16 to 1146
> BS11334.pep
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ
KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT
IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL
STFQQMWISKQEYDESGPSIVHRKCF*
BS11334.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:42:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Act5C-PE | 376 | CG4027-PE | 1..376 | 1..376 | 1966 | 100 | Plus |
| Act5C-PD | 376 | CG4027-PD | 1..376 | 1..376 | 1966 | 100 | Plus |
| Act5C-PC | 376 | CG4027-PC | 1..376 | 1..376 | 1966 | 100 | Plus |
| Act5C-PA | 376 | CG4027-PA | 1..376 | 1..376 | 1966 | 100 | Plus |
| Act5C-PB | 376 | CG4027-PB | 1..376 | 1..376 | 1966 | 100 | Plus |
