Clone Sequence Records
BS11344.3prime Sequence
849 bp (848 high quality bases) assembled on 2006-04-18
> BS11344.3prime
ATGGTCTAGAAAGCTTTTAACAATAAATAAAAATATAAAATTCGCAATAT
ATTAAAGTTAATGAACTTACCGCTCCCGCAGAATCGTAGTACACACGATT
CGGAACAGGTCGCCTTACTGGCGGAGGTGCCGCATAGTTGGGATCCACTT
CAGGATCGCTCTGCGCATCTCCAGCAGGACGAACTGGATCTCTTAGAGGA
TCTCTGACTGGAACACCAGGCACCACGGCCGAGTTAAGAATTCCTGGAGC
AAAGAGCGATAGCCAGGTGGCAAATGGTGCGTACGGACGCACTGGCACTG
GAATGGGTTGTACAGGTGGAAGAGGATCAGACAGAAGACCTCCACCCAAA
CCACCTCCTCCATAGCCGCGACATCCACCGGGATATACTTTCACCACATT
CACGTCGAACAGAAAGCGACCCTGTTCAGCGGGATCCTTCTGATTCTGAC
CACCTCGAGCATCGCGACCAAACGGGGAGCAGGGACCACCGCCGTATCCT
CCATATCCGCCATATCCACCATATCCGCCATATCCACCATATCCTCCTAG
GTAGGGCCTGGCCAACCTCTTGAGCTTCTTTTTAAGCAGCAGTGTGCGTT
CGTCACCGGTTTCATCCAATTCCTGATTGGAAGCACCAGCAAACTTGGCA
TTCTCCTTGTCCGATTTGCTGGTGGTACTTTCTTCCCTAGCCTTCCGACC
GGCCAAAGAGCTATACGAATTCCCGGAATACGATGTGGAGTAGGCCCTTC
GGCGGGGATACTCGTAACTATAGGTGCGCGGATAGGCCAACGAATAGCCC
AAGGCTCCCAGAAGGAGTAGAAGAAACAGTTTCATGTCGACTGATAACT
BS11344.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:07:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14329-PA | 906 | CG14329-RA | 1..765 | 835..71 | 3825 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:15:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14329-RA | 1103 | CG14329-RA | 65..829 | 835..71 | 3825 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:15:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17609423..17610248 | 835..10 | 4100 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:15:04 has no hits.
BS11344.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:06:11 Download gff for
BS11344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-PA | 1..819 | 17..835 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:35:43 Download gff for
BS11344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-PA | 1..765 | 71..835 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 02:16:29 Download gff for
BS11344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-RA | 60..829 | 71..840 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:25:49 Download gff for
BS11344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-RA | 60..829 | 71..840 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:25:49 Download gff for
BS11344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17609418..17610248 | 10..840 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 02:16:29 Download gff for
BS11344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13435140..13435970 | 10..840 | 99 | | Minus |
BS11344.5prime Sequence
850 bp (807 high quality bases) assembled on 2006-04-18
> BS11344.5prime
GAAGTTATCAGTCGACATGAAACTGTTTCTTCTACTCCTTCTGGGAGCCT
TGGGCTATTCGTTGGCCTATCCGCGCACCTATAGTTACGAGTATCCCCGC
CGAAGGGCCTACTCCACATCGTATTCCGGGAATTCGTATAGCTCTTTGGC
CGGTCGGAAGGCTAGGGAAGAAAGTACCACCAGCAAATCGGACAAGGAGA
ATGCCAAGTTTGCTGGTGCTTCCAATCAGGAATTGGATGAAACCGGTGAC
GAACGCACACTGCTGCTTAAAAAGAAGCTCAAGAGGTTGGCCAGGCCCTA
CCTAGGAGGATATGGTGGATATGGCGGATATGGTGGATATGGCGGATATG
GAGGATACGGCGGTGGTCCCTGCTCCCCGTTTGGTCGCGATGCTCGAGGT
GGTCAGAATCAGAAGGATCCCGCTGAACAGGGTCGCTTTCTGTTCGACGT
GAATGTGGTGAAAGTATATCCCGGTGGATGTCGCGGCTATGGAGGAGGTG
GTTTGGGTGGAGGTCTTCTGTCTGATCCTCTTCCACCTGTACAACCCATT
CCAGTGCCAGTGCGTCCGTACGCACCATTTGCCACCTGGCTATCGCTCTT
TGCTCCAGGAATTCTTAACTCGGCCGTGGTGCCTGGTGTTCCAGTCAGAG
ATCCTCTAAGAGATCCAGTTCGTCCTGCTGGAGATGCGCAGAGCGATCCT
GAAGTGGATCCCAACTATGCGGCACCTCCGCCAGTAAGGCGACCTGTTCC
GAATCGTGTGTACTACGATTCTGCGGGAGCGGTAAGTTCATTAACTTTAA
TATATTGCGAAATTTATATTTTTATTTATTGTTTAAAAGCTTTCTAGACC
BS11344.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:07:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14329-PA | 906 | CG14329-RA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:55:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14329-RA | 1103 | CG14329-RA | 65..829 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:55:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17609423..17610239 | 17..833 | 4070 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:55:05 has no hits.
BS11344.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:06:12 Download gff for
BS11344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-PA | 1..819 | 17..836 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:35:44 Download gff for
BS11344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-PA | 1..765 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 04:03:07 Download gff for
BS11344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-RA | 60..829 | 12..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:36:34 Download gff for
BS11344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-RA | 60..829 | 12..781 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:36:34 Download gff for
BS11344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17609418..17610248 | 12..843 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 04:03:07 Download gff for
BS11344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13435140..13435970 | 12..843 | 99 | | Plus |
BS11344.complete Sequence
851 bp assembled on 2006-11-01
> BS11344.complete
GAAGTTATCAGTCGACATGAAACTGTTTCTTCTACTCCTTCTGGGAGCCT
TGGGCTATTCGTTGGCCTATCCGCGCACCTATAGTTACGAGTATCCCCGC
CGAAGGGCCTACTCCACATCGTATTCCGGGAATTCGTATAGCTCTTTGGC
CGGTCGGAAGGCTAGGGAAGAAAGTACCACCAGCAAATCGGACAAGGAGA
ATGCCAAGTTTGCTGGTGCTTCCAATCAGGAATTGGATGAAACCGGTGAC
GAACGCACACTGCTGCTTAAAAAGAAGCTCAAGAGGTTGGCCAGGCCCTA
CCTAGGAGGATATGGTGGATATGGCGGATATGGTGGATATGGCGGATATG
GAGGATACGGCGGTGGTCCCTGCTCCCCGTTTGGTCGCGATGCTCGAGGT
GGTCAGAATCAGAAGGATCCCGCTGAACAGGGTCGCTTTCTGTTCGACGT
GAATGTGGTGAAAGTATATCCCGGTGGATGTCGCGGCTATGGAGGAGGTG
GTTTGGGTGGAGGTCTTCTGTCTGATCCTCTTCCACCTGTACAACCCATT
CCAGTGCCAGTGCGTCCGTACGCACCATTTGCCACCTGGCTATCGCTCTT
TGCTCCAGGAATTCTTAACTCGGCCGTGGTGCCTGGTGTTCCAGTCAGAG
ATCCTCTAAGAGATCCAGTTCGTCCTGCTGGAGATGCGCAGAGCGATCCT
GAAGTGGATCCCAACTATGCGGCACCTCCGCCAGTAAGGCGACCTGTTCC
GAATCGTGTGTACTACGATTCTGCGGGAGCGGTAAGTTCATTAACTTTAA
TATATTGCGAATTTTATATTTTTATTTATTGTTAAAAGCTTTCTAGACCA
T
BS11344.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:37:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14329-RA | 906 | CG14329-PA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:38:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14329-RA | 1103 | CG14329-RA | 65..829 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:37:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17609423..17610248 | 17..842 | 4100 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:37:57 has no hits.
BS11344.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:50:45 Download gff for
BS11344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-RA | 1..765 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:25:50 Download gff for
BS11344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-RA | 57..826 | 12..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:29 Download gff for
BS11344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-RA | 65..829 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:50:45 Download gff for
BS11344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-RA | 57..826 | 12..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:05:15 Download gff for
BS11344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14329-RA | 65..829 | 17..781 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:05:15 Download gff for
BS11344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17609423..17610239 | 17..833 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:29 Download gff for
BS11344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13435145..13435961 | 17..833 | 100 | | Plus |
BS11344.pep Sequence
Translation from 16 to 834
> BS11344.pep
MKLFLLLLLGALGYSLAYPRTYSYEYPRRRAYSTSYSGNSYSSLAGRKAR
EESTTSKSDKENAKFAGASNQELDETGDERTLLLKKKLKRLARPYLGGYG
GYGGYGGYGGYGGYGGGPCSPFGRDARGGQNQKDPAEQGRFLFDVNVVKV
YPGGCRGYGGGGLGGGLLSDPLPPVQPIPVPVRPYAPFATWLSLFAPGIL
NSAVVPGVPVRDPLRDPVRPAGDAQSDPEVDPNYAAPPPVRRPVPNRVYY
DSAGAVSSLTLIYCEFYIFIYC*
BS11344.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:43:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14329-PA | 301 | CG14329-PA | 1..255 | 1..255 | 1372 | 100 | Plus |