Clone BS11389 Report

Search the DGRC for BS11389

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:113
Well:89
Vector:pDNR-Dual
Associated Gene/TranscriptUgt58Fa-RA
Protein status:BS11389.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS11389.3prime Sequence

906 bp (849 high quality bases) assembled on 2006-04-18

> BS11389.3prime
ATGGTCTAGAAAGCTTCTAATTTACTTTGGTCGACTTGGAGTTGTTTTTC
TTATTCCAAATATAAAAGCCGCCAAAACTCAGGGCCACCAGTAAGCTTAC
GACTAAAGTAGCTATTCCGGCATAGAACACGAAGAGGTCGAACAGGTGCA
GCTGGCAGGAGGAGATCCCAATGCCTCGGGTTCTCAAAGCCGATCCTCCC
TTGTGCCGGGCCACATAGTTCACCCAGAAGAGAGCGCTGGCCAGAGCGCC
AAGAGGACGGTCCCTGAACTCCAGAGACACATCCCGGATGGTCAACTGGA
AGTGTGACTCGAGGAGTAGCCTGTCCACTGCCCAGTTTAGTGACTCAGTT
GTCACATTGCCCTCCTCCAGCTGTAGGCCAACTCCTAATCGCACGGCTAG
CTCCATGTTCCGAGCTTCATGCTGGAATAGGGGCAATCCCAGAATGGGCA
CATTCCGCATGATGCCCTCCTGCAGGTTGAGCAGATCTCCATTGGTTAGG
AAAGCCTTGACTCTCGGATGCGCCAGGATGTCTATCTGCGGCACTGCATG
CTGGATCATCACATTCTTTGGCAGTCCCTCCAGGGTCTTGACGTCGTGAC
AGGTCCAGATTATGCTCTGCTTTCTGGCGGAGAAGAAGGCAAACAGAGTG
TCGAGTTTCTCCTTGGGTAGCTGGCCACAAGCCTGCTCATTGCCCAGTTG
AACGTAGATGGCTCCAGGACGCGCCTCCTCCAGAAAGCGCTTCACATTCC
AGGGCAGCTCCTTGGGACCACGGATGTGAAGTCCACCGGCGGGAATTATC
TGTTGGATACTAACTTTGGGAGTTATCAATGGCACATGACTATTGAGCAG
CAGCACGGATAGCTGGCTGGCCTGCAGCTCGGGGATAGAGCTCTGCAGCT
GGAAGT

BS11389.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG4414-PA 1590 Ugt58Fa-RA 701..1590 906..17 4450 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:11:05
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt58Fa-RB 1864 CG4414-RB 811..1700 906..17 4450 100 Minus
Ugt58Fa-RA 1742 CG4414-RA 811..1700 906..17 4450 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 04:10:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22641950..22642839 17..906 4450 100 Plus
Blast to na_te.dros performed on 2015-02-09 04:11:01 has no hits.

BS11389.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:07:37 Download gff for BS11389.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4414-PA 701..1590 17..906 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:37:40 Download gff for BS11389.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4414-PA 701..1590 17..906 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 08:01:56 Download gff for BS11389.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 811..1708 6..906 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:31:39 Download gff for BS11389.3prime
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 811..1708 6..906 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:31:39 Download gff for BS11389.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 22641942..22642839 6..906 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 08:01:56 Download gff for BS11389.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18529447..18530344 6..906 99   Plus

BS11389.5prime Sequence

906 bp (821 high quality bases) assembled on 2006-04-18

> BS11389.5prime
GAAGTTATCAGTCGACATGGAATCTCAATGGAATCGTTGGATCTTGCTGG
CTATTTTGGGACTAGCTCTGGGCCAGATTTCACAGGCAGCCAAGATCCTG
GTACTGTTTCCCCATGTCAACGAGGGTCACTTTGCGGTGATGCGGACTCT
GGTCACCGAGTTGGCCAATCGCGAGCACACAATTGAAGTATATACCGGTC
ATGGTTTGGGAGAATCTCTGGATAACGTTACCGAAACGGTGACAGCGGAA
TTTCCTTTTTGGAGCGAATTGCAAAAACAGGCGGCACCCAAGGGAAACCT
TGCTGATCTTGGACTCCTGCCAATTGAAAAACTCCGCCAGTCATTGGCCA
GCGTTGGAGCGCGTGCTTTGGACCACTTCCTCGCCCAAGAGCCCATCCAA
AAGCTGCTGAAGATGTCATATCTTGAGTTCGATTTCGATGTGATCCTTGT
GGACTACTTCTACACAGAGGCTTTGTTGGCACTGGGAGCTCTCCATCAGC
GGCCAGTTGTAGGGATTATTTCCACGGACTTCGGCAACTACATGGATGCC
GTACAAGAGGCACTGGTACCAGCCGCTTGTTCACCCATCGATTTTGAGCG
GGATCAACCTGAAATGAGCTTCTCCGTACGATTGGGAAATATTCGGACAT
GTATTGCTCGCCGTAAGCAGTTCATCAAGGATCACTACGGCGGTCAGGAG
CAGTTGGTGACCAAGTACTTCCAGCTGCAGAGCTCTATCCCCGAGCTGCA
GGCCAGCCAGCTATCCGTGCTGCTGCTCAATAGTCATGTGCCATTGATAA
CTCCCAAAGTTAGTATCCAACAGATAATTCCCGCCGGTGGACTTCACATC
CGTGGTCCCAAGGAGCTGCCCTGGAATGTGAAGCGCTTTCTGGAGGAGGC
GCGTCC

BS11389.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG4414-PA 1590 Ugt58Fa-RA 1..890 17..906 4450 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt58Fa-RB 1864 CG4414-RB 111..1000 17..906 4450 100 Plus
Ugt58Fa-RA 1742 CG4414-RA 111..1000 17..906 4450 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22642650..22643286 906..270 3185 100 Minus
2R 25286936 2R 22643492..22643654 181..19 815 100 Minus
2R 25286936 2R 22643343..22643430 269..182 440 100 Minus
Blast to na_te.dros performed on 2015-02-13 09:54:53 has no hits.

BS11389.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:07:38 Download gff for BS11389.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4414-PA 1..890 17..906 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:37:41 Download gff for BS11389.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4414-PA 1..890 17..906 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:48:15 Download gff for BS11389.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 104..1000 10..906 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:32:43 Download gff for BS11389.5prime
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 104..1000 10..906 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:32:43 Download gff for BS11389.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22643492..22643654 19..181 100   Minus
2R 22642650..22643286 270..906 100 <- Minus
2R 22643343..22643430 182..269 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:48:15 Download gff for BS11389.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18530155..18530791 270..906 100 <- Minus
arm_2R 18530848..18530935 182..269 100 <- Minus
arm_2R 18530997..18531159 19..181 100   Minus

BS11389.complete Sequence

1622 bp assembled on 2006-11-01

GenBank Submission: FJ636849

> BS11389.complete
GAAGTTATCAGTCGACATGGAATCTCAATGGAATCGTTGGATCTTGCTGG
CTATTTTGGGACTAGCTCTGGGCCAGATTTCACAGGCAGCCAAGATCCTG
GTACTGTTTCCCCATGTCAACGAGGGTCACTTTGCGGTGATGCGGACTCT
GGTCACCGAGTTGGCCAATCGCGAGCACACAATTGAAGTATATACCGGTC
ATGGTTTGGGAGAATCTCTGGATAACGTTACCGAAACGGTGACAGCGGAA
TTTCCTTTTTGGAGCGAATTGCAAAAACAGGCGGCACCCAAGGGAAACCT
TGCTGATCTTGGACTCCTGCCAATTGAAAAACTCCGCCAGTCATTGGCCA
GCGTTGGAGCGCGTGCTTTGGACCACTTCCTCGCCCAAGAGCCCATCCAA
AAGCTGCTGAAGATGTCATATCTTGAGTTCGATTTCGATGTGATCCTTGT
GGACTACTTCTACACAGAGGCTTTGTTGGCACTGGGAGCTCTCCATCAGC
GGCCAGTTGTAGGGATTATTTCCACGGACTTCGGCAACTACATGGATGCC
GTACAAGAGGCACTGGTACCAGCCGCTTGTTCACCCATCGATTTTGAGCG
GGATCAACCTGAAATGAGCTTCTCCGTACGATTGGGAAATATTCGGACAT
GTATTGCTCGCCGTAAGCAGTTCATCAAGGATCACTACGGCGGTCAGGAG
CAGTTGGTGACCAAGTACTTCCAGCTGCAGAGCTCTATCCCCGAGCTGCA
GGCCAGCCAGCTATCCGTGCTGCTGCTCAATAGTCATGTGCCATTGATAA
CTCCCAAAGTTAGTATCCAACAGATAATTCCCGCCGGTGGACTTCACATC
CGTGGTCCCAAGGAGCTGCCCTGGAATGTGAAGCGCTTTCTGGAGGAGGC
GCGTCCTGGAGCCATCTACGTTCAACTGGGCAATGAGCAGGCTTGTGGCC
AGCTACCCAAGGAGAAACTCGACACTCTGTTTGCCTTCTTCTCCGCCAGA
AAGCAGAGCATAATCTGGACCTGTCACGACGTCAAGACCCTGGAGGGACT
GCCAAAGAATGTGATGATCCAGCATGCAGTGCCGCAGATAGACATCCTGG
CGCATCCGAGAGTCAAGGCTTTCCTAACCAATGGAGATCTGCTCAACCTG
CAGGAGGGCATCATGCGGAATGTGCCCATTCTGGGATTGCCCCTATTCCA
GCATGAAGCTCGGAACATGGAGCTAGCCGTGCGATTAGGAGTTGGCCTAC
AGCTGGAGGAGGGCAATGTGACAACTGAGTCACTAAACTGGGCAGTGGAC
AGGCTACTCCTCGAGTCACACTTCCAGTTGACCATCCGGGATGTGTCTCT
GGAGTTCAGGGACCGTCCTCTTGGCGCTCTGGCCAGCGCTCTCTTCTGGG
TGAACTATGTGGCCCGGCACAAGGGAGGATCGGCTTTGAGAACCCGAGGC
ATTGGGATCTCCTCCTGCCAGCTGCACCTGTTCGACCTCTTCGTGTTCTA
TGCCGGAATAGCTACTTTAGTCGTAAGCTTACTGGTGGCCCTGAGTTTTG
GCGGCTTTTATATTTGGAATAAGAAAAACAACTCCAAGTCGACCAAAGTA
AATTAGAAGCTTTCTAGACCAT

BS11389.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt58Fa-RB 1590 CG4414-PB 1..1590 17..1606 7950 100 Plus
Ugt58Fa-RA 1590 CG4414-PA 1..1590 17..1606 7950 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt58Fa-RB 1864 CG4414-RB 111..1700 17..1606 7950 100 Plus
Ugt58Fa-RA 1742 CG4414-RA 111..1700 17..1606 7950 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:29:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22641950..22643286 1606..270 6685 100 Minus
2R 25286936 2R 22643492..22643654 181..19 815 100 Minus
2R 25286936 2R 22643343..22643430 269..182 440 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:29:48 has no hits.

BS11389.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:51:16 Download gff for BS11389.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 1..1590 17..1606 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:26:26 Download gff for BS11389.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 102..1706 10..1617 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:25:42 Download gff for BS11389.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 111..1700 17..1606 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:51:16 Download gff for BS11389.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 102..1706 10..1617 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:32:55 Download gff for BS11389.complete
Subject Subject Range Query Range Percent Splice Strand
Ugt58Fa-RA 111..1700 17..1606 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:32:55 Download gff for BS11389.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22643343..22643430 182..269 100 <- Minus
2R 22643492..22643655 17..181 99   Minus
2R 22641950..22643286 270..1606 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:25:42 Download gff for BS11389.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18529455..18530791 270..1606 100 <- Minus
arm_2R 18530848..18530935 182..269 100 <- Minus
arm_2R 18530997..18531160 17..181 99   Minus

BS11389.pep Sequence

Translation from 16 to 1605

> BS11389.pep
MESQWNRWILLAILGLALGQISQAAKILVLFPHVNEGHFAVMRTLVTELA
NREHTIEVYTGHGLGESLDNVTETVTAEFPFWSELQKQAAPKGNLADLGL
LPIEKLRQSLASVGARALDHFLAQEPIQKLLKMSYLEFDFDVILVDYFYT
EALLALGALHQRPVVGIISTDFGNYMDAVQEALVPAACSPIDFERDQPEM
SFSVRLGNIRTCIARRKQFIKDHYGGQEQLVTKYFQLQSSIPELQASQLS
VLLLNSHVPLITPKVSIQQIIPAGGLHIRGPKELPWNVKRFLEEARPGAI
YVQLGNEQACGQLPKEKLDTLFAFFSARKQSIIWTCHDVKTLEGLPKNVM
IQHAVPQIDILAHPRVKAFLTNGDLLNLQEGIMRNVPILGLPLFQHEARN
MELAVRLGVGLQLEEGNVTTESLNWAVDRLLLESHFQLTIRDVSLEFRDR
PLGALASALFWVNYVARHKGGSALRTRGIGISSCQLHLFDLFVFYAGIAT
LVVSLLVALSFGGFYIWNKKNNSKSTKVN*

BS11389.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:42:50
Subject Length Description Subject Range Query Range Score Percent Strand
Ugt58Fa-PB 529 CG4414-PB 1..529 1..529 2713 100 Plus
Ugt58Fa-PA 529 CG4414-PA 1..529 1..529 2713 100 Plus
CG15661-PB 530 CG15661-PB 20..524 20..521 649 30.5 Plus
CG15661-PA 530 CG15661-PA 20..524 20..521 649 30.5 Plus
CG4302-PA 532 CG4302-PA 11..523 10..526 645 29.9 Plus