Clone Sequence Records
BS11389.3prime Sequence
906 bp (849 high quality bases) assembled on 2006-04-18
> BS11389.3prime
ATGGTCTAGAAAGCTTCTAATTTACTTTGGTCGACTTGGAGTTGTTTTTC
TTATTCCAAATATAAAAGCCGCCAAAACTCAGGGCCACCAGTAAGCTTAC
GACTAAAGTAGCTATTCCGGCATAGAACACGAAGAGGTCGAACAGGTGCA
GCTGGCAGGAGGAGATCCCAATGCCTCGGGTTCTCAAAGCCGATCCTCCC
TTGTGCCGGGCCACATAGTTCACCCAGAAGAGAGCGCTGGCCAGAGCGCC
AAGAGGACGGTCCCTGAACTCCAGAGACACATCCCGGATGGTCAACTGGA
AGTGTGACTCGAGGAGTAGCCTGTCCACTGCCCAGTTTAGTGACTCAGTT
GTCACATTGCCCTCCTCCAGCTGTAGGCCAACTCCTAATCGCACGGCTAG
CTCCATGTTCCGAGCTTCATGCTGGAATAGGGGCAATCCCAGAATGGGCA
CATTCCGCATGATGCCCTCCTGCAGGTTGAGCAGATCTCCATTGGTTAGG
AAAGCCTTGACTCTCGGATGCGCCAGGATGTCTATCTGCGGCACTGCATG
CTGGATCATCACATTCTTTGGCAGTCCCTCCAGGGTCTTGACGTCGTGAC
AGGTCCAGATTATGCTCTGCTTTCTGGCGGAGAAGAAGGCAAACAGAGTG
TCGAGTTTCTCCTTGGGTAGCTGGCCACAAGCCTGCTCATTGCCCAGTTG
AACGTAGATGGCTCCAGGACGCGCCTCCTCCAGAAAGCGCTTCACATTCC
AGGGCAGCTCCTTGGGACCACGGATGTGAAGTCCACCGGCGGGAATTATC
TGTTGGATACTAACTTTGGGAGTTATCAATGGCACATGACTATTGAGCAG
CAGCACGGATAGCTGGCTGGCCTGCAGCTCGGGGATAGAGCTCTGCAGCT
GGAAGT
BS11389.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:08:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4414-PA | 1590 | Ugt58Fa-RA | 701..1590 | 906..17 | 4450 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:11:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt58Fa-RB | 1864 | CG4414-RB | 811..1700 | 906..17 | 4450 | 100 | Minus |
Ugt58Fa-RA | 1742 | CG4414-RA | 811..1700 | 906..17 | 4450 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 04:10:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22641950..22642839 | 17..906 | 4450 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 04:11:01 has no hits.
BS11389.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:07:37 Download gff for
BS11389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4414-PA | 701..1590 | 17..906 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:37:40 Download gff for
BS11389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4414-PA | 701..1590 | 17..906 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 08:01:56 Download gff for
BS11389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 811..1708 | 6..906 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:31:39 Download gff for
BS11389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 811..1708 | 6..906 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:31:39 Download gff for
BS11389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22641942..22642839 | 6..906 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 08:01:56 Download gff for
BS11389.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18529447..18530344 | 6..906 | 99 | | Plus |
BS11389.5prime Sequence
906 bp (821 high quality bases) assembled on 2006-04-18
> BS11389.5prime
GAAGTTATCAGTCGACATGGAATCTCAATGGAATCGTTGGATCTTGCTGG
CTATTTTGGGACTAGCTCTGGGCCAGATTTCACAGGCAGCCAAGATCCTG
GTACTGTTTCCCCATGTCAACGAGGGTCACTTTGCGGTGATGCGGACTCT
GGTCACCGAGTTGGCCAATCGCGAGCACACAATTGAAGTATATACCGGTC
ATGGTTTGGGAGAATCTCTGGATAACGTTACCGAAACGGTGACAGCGGAA
TTTCCTTTTTGGAGCGAATTGCAAAAACAGGCGGCACCCAAGGGAAACCT
TGCTGATCTTGGACTCCTGCCAATTGAAAAACTCCGCCAGTCATTGGCCA
GCGTTGGAGCGCGTGCTTTGGACCACTTCCTCGCCCAAGAGCCCATCCAA
AAGCTGCTGAAGATGTCATATCTTGAGTTCGATTTCGATGTGATCCTTGT
GGACTACTTCTACACAGAGGCTTTGTTGGCACTGGGAGCTCTCCATCAGC
GGCCAGTTGTAGGGATTATTTCCACGGACTTCGGCAACTACATGGATGCC
GTACAAGAGGCACTGGTACCAGCCGCTTGTTCACCCATCGATTTTGAGCG
GGATCAACCTGAAATGAGCTTCTCCGTACGATTGGGAAATATTCGGACAT
GTATTGCTCGCCGTAAGCAGTTCATCAAGGATCACTACGGCGGTCAGGAG
CAGTTGGTGACCAAGTACTTCCAGCTGCAGAGCTCTATCCCCGAGCTGCA
GGCCAGCCAGCTATCCGTGCTGCTGCTCAATAGTCATGTGCCATTGATAA
CTCCCAAAGTTAGTATCCAACAGATAATTCCCGCCGGTGGACTTCACATC
CGTGGTCCCAAGGAGCTGCCCTGGAATGTGAAGCGCTTTCTGGAGGAGGC
GCGTCC
BS11389.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:08:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4414-PA | 1590 | Ugt58Fa-RA | 1..890 | 17..906 | 4450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:54:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt58Fa-RB | 1864 | CG4414-RB | 111..1000 | 17..906 | 4450 | 100 | Plus |
Ugt58Fa-RA | 1742 | CG4414-RA | 111..1000 | 17..906 | 4450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:54:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22642650..22643286 | 906..270 | 3185 | 100 | Minus |
2R | 25286936 | 2R | 22643492..22643654 | 181..19 | 815 | 100 | Minus |
2R | 25286936 | 2R | 22643343..22643430 | 269..182 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 09:54:53 has no hits.
BS11389.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:07:38 Download gff for
BS11389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4414-PA | 1..890 | 17..906 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:37:41 Download gff for
BS11389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4414-PA | 1..890 | 17..906 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:48:15 Download gff for
BS11389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 104..1000 | 10..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:32:43 Download gff for
BS11389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 104..1000 | 10..906 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:32:43 Download gff for
BS11389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22643492..22643654 | 19..181 | 100 | | Minus |
2R | 22642650..22643286 | 270..906 | 100 | <- | Minus |
2R | 22643343..22643430 | 182..269 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:48:15 Download gff for
BS11389.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18530155..18530791 | 270..906 | 100 | <- | Minus |
arm_2R | 18530848..18530935 | 182..269 | 100 | <- | Minus |
arm_2R | 18530997..18531159 | 19..181 | 100 | | Minus |
BS11389.complete Sequence
1622 bp assembled on 2006-11-01
GenBank Submission: FJ636849
> BS11389.complete
GAAGTTATCAGTCGACATGGAATCTCAATGGAATCGTTGGATCTTGCTGG
CTATTTTGGGACTAGCTCTGGGCCAGATTTCACAGGCAGCCAAGATCCTG
GTACTGTTTCCCCATGTCAACGAGGGTCACTTTGCGGTGATGCGGACTCT
GGTCACCGAGTTGGCCAATCGCGAGCACACAATTGAAGTATATACCGGTC
ATGGTTTGGGAGAATCTCTGGATAACGTTACCGAAACGGTGACAGCGGAA
TTTCCTTTTTGGAGCGAATTGCAAAAACAGGCGGCACCCAAGGGAAACCT
TGCTGATCTTGGACTCCTGCCAATTGAAAAACTCCGCCAGTCATTGGCCA
GCGTTGGAGCGCGTGCTTTGGACCACTTCCTCGCCCAAGAGCCCATCCAA
AAGCTGCTGAAGATGTCATATCTTGAGTTCGATTTCGATGTGATCCTTGT
GGACTACTTCTACACAGAGGCTTTGTTGGCACTGGGAGCTCTCCATCAGC
GGCCAGTTGTAGGGATTATTTCCACGGACTTCGGCAACTACATGGATGCC
GTACAAGAGGCACTGGTACCAGCCGCTTGTTCACCCATCGATTTTGAGCG
GGATCAACCTGAAATGAGCTTCTCCGTACGATTGGGAAATATTCGGACAT
GTATTGCTCGCCGTAAGCAGTTCATCAAGGATCACTACGGCGGTCAGGAG
CAGTTGGTGACCAAGTACTTCCAGCTGCAGAGCTCTATCCCCGAGCTGCA
GGCCAGCCAGCTATCCGTGCTGCTGCTCAATAGTCATGTGCCATTGATAA
CTCCCAAAGTTAGTATCCAACAGATAATTCCCGCCGGTGGACTTCACATC
CGTGGTCCCAAGGAGCTGCCCTGGAATGTGAAGCGCTTTCTGGAGGAGGC
GCGTCCTGGAGCCATCTACGTTCAACTGGGCAATGAGCAGGCTTGTGGCC
AGCTACCCAAGGAGAAACTCGACACTCTGTTTGCCTTCTTCTCCGCCAGA
AAGCAGAGCATAATCTGGACCTGTCACGACGTCAAGACCCTGGAGGGACT
GCCAAAGAATGTGATGATCCAGCATGCAGTGCCGCAGATAGACATCCTGG
CGCATCCGAGAGTCAAGGCTTTCCTAACCAATGGAGATCTGCTCAACCTG
CAGGAGGGCATCATGCGGAATGTGCCCATTCTGGGATTGCCCCTATTCCA
GCATGAAGCTCGGAACATGGAGCTAGCCGTGCGATTAGGAGTTGGCCTAC
AGCTGGAGGAGGGCAATGTGACAACTGAGTCACTAAACTGGGCAGTGGAC
AGGCTACTCCTCGAGTCACACTTCCAGTTGACCATCCGGGATGTGTCTCT
GGAGTTCAGGGACCGTCCTCTTGGCGCTCTGGCCAGCGCTCTCTTCTGGG
TGAACTATGTGGCCCGGCACAAGGGAGGATCGGCTTTGAGAACCCGAGGC
ATTGGGATCTCCTCCTGCCAGCTGCACCTGTTCGACCTCTTCGTGTTCTA
TGCCGGAATAGCTACTTTAGTCGTAAGCTTACTGGTGGCCCTGAGTTTTG
GCGGCTTTTATATTTGGAATAAGAAAAACAACTCCAAGTCGACCAAAGTA
AATTAGAAGCTTTCTAGACCAT
BS11389.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:29:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt58Fa-RB | 1590 | CG4414-PB | 1..1590 | 17..1606 | 7950 | 100 | Plus |
Ugt58Fa-RA | 1590 | CG4414-PA | 1..1590 | 17..1606 | 7950 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:29:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt58Fa-RB | 1864 | CG4414-RB | 111..1700 | 17..1606 | 7950 | 100 | Plus |
Ugt58Fa-RA | 1742 | CG4414-RA | 111..1700 | 17..1606 | 7950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:29:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22641950..22643286 | 1606..270 | 6685 | 100 | Minus |
2R | 25286936 | 2R | 22643492..22643654 | 181..19 | 815 | 100 | Minus |
2R | 25286936 | 2R | 22643343..22643430 | 269..182 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:29:48 has no hits.
BS11389.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:51:16 Download gff for
BS11389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 1..1590 | 17..1606 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:26:26 Download gff for
BS11389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 102..1706 | 10..1617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:25:42 Download gff for
BS11389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 111..1700 | 17..1606 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:51:16 Download gff for
BS11389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 102..1706 | 10..1617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:32:55 Download gff for
BS11389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ugt58Fa-RA | 111..1700 | 17..1606 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:32:55 Download gff for
BS11389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22643343..22643430 | 182..269 | 100 | <- | Minus |
2R | 22643492..22643655 | 17..181 | 99 | | Minus |
2R | 22641950..22643286 | 270..1606 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:25:42 Download gff for
BS11389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18529455..18530791 | 270..1606 | 100 | <- | Minus |
arm_2R | 18530848..18530935 | 182..269 | 100 | <- | Minus |
arm_2R | 18530997..18531160 | 17..181 | 99 | | Minus |
BS11389.pep Sequence
Translation from 16 to 1605
> BS11389.pep
MESQWNRWILLAILGLALGQISQAAKILVLFPHVNEGHFAVMRTLVTELA
NREHTIEVYTGHGLGESLDNVTETVTAEFPFWSELQKQAAPKGNLADLGL
LPIEKLRQSLASVGARALDHFLAQEPIQKLLKMSYLEFDFDVILVDYFYT
EALLALGALHQRPVVGIISTDFGNYMDAVQEALVPAACSPIDFERDQPEM
SFSVRLGNIRTCIARRKQFIKDHYGGQEQLVTKYFQLQSSIPELQASQLS
VLLLNSHVPLITPKVSIQQIIPAGGLHIRGPKELPWNVKRFLEEARPGAI
YVQLGNEQACGQLPKEKLDTLFAFFSARKQSIIWTCHDVKTLEGLPKNVM
IQHAVPQIDILAHPRVKAFLTNGDLLNLQEGIMRNVPILGLPLFQHEARN
MELAVRLGVGLQLEEGNVTTESLNWAVDRLLLESHFQLTIRDVSLEFRDR
PLGALASALFWVNYVARHKGGSALRTRGIGISSCQLHLFDLFVFYAGIAT
LVVSLLVALSFGGFYIWNKKNNSKSTKVN*
BS11389.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:42:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ugt58Fa-PB | 529 | CG4414-PB | 1..529 | 1..529 | 2713 | 100 | Plus |
Ugt58Fa-PA | 529 | CG4414-PA | 1..529 | 1..529 | 2713 | 100 | Plus |
CG15661-PB | 530 | CG15661-PB | 20..524 | 20..521 | 649 | 30.5 | Plus |
CG15661-PA | 530 | CG15661-PA | 20..524 | 20..521 | 649 | 30.5 | Plus |
CG4302-PA | 532 | CG4302-PA | 11..523 | 10..526 | 645 | 29.9 | Plus |