Clone Sequence Records
BS11439.3prime Sequence
860 bp (803 high quality bases) assembled on 2006-05-08
> BS11439.3prime
ATGGTCTAGAAAGCTTCTATCTGACGGAAATCCCATTGATGGTGATGACA
TTACTGGCCACCGGTTCCGGTTCGTAAACCTCATCATTGGTGCGCATCTC
ATAGGGAGCGTCGTAGAATTGCTCGTTTGGTATTTGATCGTAAATGTTTT
CCGACCGATTGTTGTTCAGTCTTTCACCATTGCTGTTTGCATCCGGATTA
CCGCCGCCGTTGCTCCTTCCGCCGGCTCCGCCATGGAACGTGTTGAACGT
CGCCGACGGATTGTTGTCCATGTGCATCCGATTGTTGGCCTCCAGCGTCG
AGTAGGACATTACGGCGGCATTGCGTTCGTCCTTCGTCTCCGCCGCCTGC
ACATTCTCCGTATTTTTGACGGGTCTCGCCTTGTTGCGATATAGGAAGAT
CAGACCAAAGATCACCAGCAGGGCGACGATCACGGTGGCACCAATGCCAA
CGCCCGTGCCCAGCTCCGAAGTCTCCTGACCCTCCGCCGTGGCCAATTCG
CAGCGCGGCTGCTTGCCGCTCCAGGCTCCATCCTCGGTGCACTTGCGCAA
ATACTGGCCAATCCGATTGTAGTTCGGTATGCAGTGATACTCCGCCGATC
CGCCGTACAACGTGGAATCGTTGACCACAATCACGCGACCATTCTCGATG
GCCAGAGGACGACCACAGTCGACGGGTCTGCAGGTGGGACTCTTGCCAGT
CCATTTGCCATTTTTCTGACACACACGCGTATCGTTTCCCATCATGATCC
TGCCCTTGGCGCACTTGAAGGTGGCCACGGAGCCCACAGCACGCGGACCC
GCCTCCCCGATCAGATTCTCATTGATGTTGGGCGTATCGCAGACCACCTC
CACGCATTCC
BS11439.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:09:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1500-PA | 3525 | fw-RA | 2682..3525 | 860..17 | 4195 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:45:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fw-RC | 4318 | CG1500-RC | 2893..3737 | 860..16 | 4210 | 99.9 | Minus |
| fw-RB | 3938 | CG1500-RB | 2513..3357 | 860..16 | 4210 | 99.9 | Minus |
| fw-RA | 4698 | CG1500-RA | 3273..4117 | 860..16 | 4210 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:45:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11993792..11994316 | 151..675 | 2625 | 100 | Plus |
| X | 23542271 | X | 11994377..11994561 | 676..860 | 910 | 99.5 | Plus |
| X | 23542271 | X | 11993496..11993631 | 16..151 | 680 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:45:52 has no hits.
BS11439.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed on 2007-01-18 11:09:11 has no hits.
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:39:45 Download gff for
BS11439.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1500-PA | 2682..3525 | 17..860 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:42:57 Download gff for
BS11439.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fw-RA | 3273..4117 | 16..860 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:45:07 Download gff for
BS11439.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fw-RA | 3273..4117 | 16..860 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:45:07 Download gff for
BS11439.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11993496..11993630 | 16..150 | 100 | <- | Plus |
| X | 11993792..11994316 | 151..675 | 100 | <- | Plus |
| X | 11994377..11994561 | 676..860 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:42:57 Download gff for
BS11439.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11887529..11887663 | 16..150 | 100 | <- | Plus |
| arm_X | 11887825..11888349 | 151..675 | 100 | <- | Plus |
| arm_X | 11888410..11888594 | 676..860 | 99 | | Plus |
BS11439.5prime Sequence
886 bp (781 high quality bases) assembled on 2006-05-08
> BS11439.5prime
GAAGTTATCAGTCGACATGTTTTGCTGCAACATACCGGTGGATGCATCCG
TGGCCACATCCACATCCACATCCATATCCACATATCCATTGCAACGGGCA
ACAAAAAGAGCCATGACTCCTCCAAATGCAATGGCACTCATTATGCTACT
GCTGCTTGCACTGTGCGCAGCTGGGAATGGCCAAATCTGCGGTCCGCCGG
CGGTGCCGCTGAATGCCAAGGTGCGAACCATCACCGTTGACTCCCAGATC
GCGGAGGCGAACTACGAGTGCGACGCTGGCTACGAGCTCTTCGGGCCATC
GGCGGTCAAGTGTGACCGGCGGACGGGCTGGGATCGGGACCTGCCCTTCT
GCGGGGTAAATGTGGCGTACCGCAAGCCGGTCAACCAGAGCTCCTATACG
CGCAGCGGTCCTGCCAGCTATGCGAACGATGGCAAGCCGGGCAACAAGAA
TCCCGATGGCCAGGAGTGCTCCGAGACGCAGAAGGAGCCATCGCCGTGGT
GGCGCGTCGACCTTCTCACTCCGCAGGCGGTGCACGTGGTGCGGATAACG
ACGCGCGGCTGCTGCGGCCATCAGCCACTGCAGGATCTGGAGATCCGTGT
GGGCAACAGCAGTGCGGATCTGCAGCGAAATCCGTTGTGCGCCTGGTATC
CGGGCACCCTGGACGAGGGCGTGGTGAAGACCTTCACGTGCGCGCGCCCA
TTGGTCGGCCAGTATGTGGCCATTCAGCTGGTGGGTGTGGAGGGCAGCCT
CAGTTTGTGCGAGGTGGAGACCTTCACCAACGACGAGTTCTCCGTGGATC
GATGCCTGAGTCCGAAAAACGGTGTGGACACTGTGGTAACGACATTCTCG
AAAACTGCTACAACTTTCATATCACAAAAGGAGAAA
BS11439.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1500-PA | 3525 | fw-RA | 1..839 | 17..855 | 4145 | 99.7 | Plus |
| CG3898-PA | 375 | CG3898-RA | 168..196 | 83..55 | 145 | 100 | Minus |
| CG1500-PA | 3525 | fw-RA | 840..871 | 855..886 | 135 | 96.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:18:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fw-RC | 4318 | CG1500-RC | 212..1082 | 17..886 | 4285 | 99.5 | Plus |
| fw-RA | 4698 | CG1500-RA | 592..1462 | 17..886 | 4285 | 99.5 | Plus |
| fw-RB | 3938 | CG1500-RB | 1..702 | 186..886 | 3440 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 00:18:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11997124..11997564 | 886..447 | 2125 | 99.3 | Minus |
| X | 23542271 | X | 11998238..11998500 | 448..186 | 1300 | 99.6 | Minus |
| X | 23542271 | X | 12001928..12002096 | 185..17 | 845 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 00:18:23 has no hits.
BS11439.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed on 2007-01-18 11:09:12 has no hits.
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:39:46 Download gff for
BS11439.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1500-PA | 1..868 | 17..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:33:06 Download gff for
BS11439.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fw-RA | 584..1459 | 9..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 01:03:05 Download gff for
BS11439.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fw-RA | 584..1459 | 9..883 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 01:03:05 Download gff for
BS11439.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11997127..11997562 | 449..883 | 99 | <- | Minus |
| X | 11998238..11998500 | 186..448 | 99 | <- | Minus |
| X | 12001928..12002104 | 9..185 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:33:06 Download gff for
BS11439.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11892271..11892533 | 186..448 | 99 | <- | Minus |
| arm_X | 11891160..11891595 | 449..883 | 99 | <- | Minus |
| arm_X | 11895961..11896137 | 9..185 | 98 | | Minus |
BS11439.complete Sequence
3557 bp assembled on 2009-08-24
GenBank Submission: KX803084
> BS11439.complete
GAAGTTATCAGTCGACATGTTTTGCTGCAACATACCGGTGGATGCATCCG
TGGCCACATCCACATCCACATCCATATCCACATATCCATTGCAACGGGCA
ACAAAAAGAGCCATGACTCCTCCAAATGCAATGGCACTCATTATGCTACT
GCTGCTTGCACTGTGCGCAGCTGGGAATGGCCAAATCTGCGGTCCGCCGG
CGGTGCCGCTGAATGCCAAGGTGCGAACCATCACCGTTGACTCCCAGATC
GCGGAGGCGCACTACGAGTGCGACGCTGGCTACGAGCTCTTCGGGCCATC
GGCGGTCAAGTGTGACCGGCGGACGGGCTGGGATCGGGACCTGCCCTTCT
GCGGGGTAAATGTGGCGTACCGCAAGCCGGTCAACCAGAGCTCCTATACG
CGCAGCGGTCCTGCCAGCTATGCGAACGATGGCAAGCCGGGCAACAAGAA
TCCCGATGGCCAGGAGTGCTCCGAGACGCAGAAGGAGCCATCGCCGTGGT
GGCGCGTCGACCTTCTCACTCCGCAGGCGGTGCACGTGGTGCGGATAACG
ACGCGCGGCTGCTGCGGCCATCAGCCACTGCAGGATCTGGAGATCCGTGT
GGGCAACAGCAGTGCGGATCTGCAGCGAAATCCGTTGTGCGCCTGGTATC
CGGGCACCCTGGACGAGGGCGTGGTGAAGACCTTCACGTGCGCGCGCCCA
TTGGTCGGCCAGTATGTGGCCATTCAGCTGGTGGGTGTGGAGGGCAGCCT
CAGTTTGTGCGAGGTGGAGACCTTCACCAACGACGAGTTCTCCGTGGATC
GATGCCTGAGTCCGAAAATCGGTGTGGACACTGTGGTAACGACATTCTCG
AAAACCTGCTACGACTTTCATATCACAAAAGGAGAAAGCTTCGACAAGGC
GCAAGCCATTTGCAAGCAAACTGGTGGCGACTTGGTACACGACTTTCGTG
GCGCCACCAGTTCGTACATCTTGTCCGAGCTGGAACGCCGGAAGAGCGAA
CTGAAACCGCAGCTTGTGTGGATTGGCGCCCAAAAGGAGCCGGGCATTAC
ATCGCGCACCTGGAAATGGGTGAACGGCGATGTGGTTCAAAAGCCAACAT
GGGGCAAGGACCAGCCGAACAACTACAATGGCGAGCAGAATTGCGTGGTC
CTCGATGGAGGTCGCAATTGGCTGTGGAATGATGTGGGCTGCAATCTGGA
CTATTTGCACTTCATCTGCCAGCACTCGCCATTGTCTTGCGGCTCGCCGG
ATGCCCAGCAAAACACCACTGTCATGGGCAAAAAGTTCACTCTGGGCGAG
AAGATTCAGTACACCTGTCCCAAGGGCCATTCGCTGCTCGGTCAGACGGA
ACGGGAGTGTAGACTTGATGGCACTTGGAGTGGCTCCTCGCCGACCTGCA
AATATGTGGACTGCGGCAGTCTGCCGGAGCTGAAGTTTGGATCCATCCAC
ATGTCGGAGGAGCGGACTAGCTTCGGCGTGGTGGCCACATACAGTTGCCA
CGAGAACTACACGCTAATCGGGAATGAGAATCGCACGTGCGCCATGGACG
GCTGGAGCGGCAAGCAGCCGGAATGCCTGGTGGACTGGTGTCCAGATCCG
CAGCCCATAGCCGGTGGCGATGTGCGATTCAATGACAAGCGTGCCGGTTC
CACGGCCACGTATGTTTGTGAGCCGGGCTATGTGCTAGTTGGCGAGGCGA
TCATCTCGTGCGGTTTGGGCGGCGAGTGGTCCAGCAAGACGCCCTCGTGC
AGATTCGTCGATTGTGGTGCACCGGCACGACCAAATCGTGGCATTGCCAT
CCTGCTGAACGGCACCACCACCGTCAATTCGGTGGTTAAATACGAGTGCG
ACGAGGATCATTGGCTGGACGGGCAGTCGGAGCTCTATTGCACCCGGGAA
GGGAAGTGGTCGGGTGAGGCGCCCGTCTGTGAACTGGTCACCTGCGAGAC
GCCATCGGTGCCATCCGGTTCGTTTGTCATTGGCTACGATTACAATGTCC
ATTCGAAGATCCAGTACAACTGCGATCCCGGTCACATTATGCACGGCACT
CCGGTGCTCGAGTGCCTGGACTCCGGGGAATGGAGTGCCGATGCGCCCTA
CTGCGAATATATCGACTGCGGCACAATCCTGCCCATTCCCTATGGCAGCC
ACAAGTACGTGACGAATACCACCTATGTGGGCTCCGAAGTGGTCTTCAGC
TGCTCCCAATCGCACAAACTGAGCGGAGTCCTCAAGCGCACGTGCCTGGA
ATCGGCTGTCTGGAGCGATGCGTCGCCCAAGTGCGAGGAGATTCGCTGTC
CGGAACCGAAACTGGCTGCGCACAGTCTGCTCTCCGTCACCGGAAATGAT
CGCATGTATGGAAGGACACTTATCCGCACCTCCGAATCCTCGCAGAACAC
AGCTCAAACCTATAAGATTGGAGCACTGGCCAAGTACCGATGCGAACGGG
GCTACAAGATGGTGGGCGAGGCACTGGCCACCTGCACGGATAGTGGACAA
TGGAGCGGCACCATTCCGGAATGTGTGTATGTGGAGTGCGGTGCTCCGGA
GGGCATCAACAATGGCAAGGTGGTCCTGGCCACAAATGCCACGTACTACG
GCGCCGCTGTCCTCTATGAGTGCAATGTGAACTTCAAGCTAAACGGAGTA
TCCCGACGCCTGTGCACGGAGCACGGCAACTGGAGCCACGAGGCACCGGA
ATGCGTGGAGGTGGTCTGCGATACGCCCAACATCAATGAGAATCTGATCG
TGGAGGCGGGTCCGCGTGCTGTGGGCTCCGTGGCCACCTTCAAGTGCGCC
AAGGGCAGGATCATGATGGGAAACGATACGCGTGTGTGTCAGAAAAATGG
CAAATGGACTGGCAAGAGTCCCACCTGCAGACCCGTCGACTGTGGTCGTC
CTCTGGCCATCGAGAATGGTCGCGTGATTGTGGTCAACGATTCCACGTTG
TACGGCGGATCGGCGGAGTATCACTGCATACCGAACTACAATCGGATTGG
CCAGTATTTGCGCAAGTGCACCGAGGATGGAGCCTGGAGCGGCAAGCAGC
CGCGCTGCGAATTGGCCACGGCGGAGGGTCAGGAGACTTCGGAGCTGGGC
ACGGGCGTTGGCATTGGTGCCACCGTGATCGTCGCCCTGCTGGTGATCTT
TGGTCTGATCTTCCTATATCGCAACAAGGCGAGACCCGTCAAAAATACGG
AGAATGTGCAGGCGGCGGAGACGAAGGACGAACGCAATGCCGCCGTAATG
TCCTACTCGACGCTGGAGGCCAACAATCGGATGCACATGGACAACAATCC
GTCGGCGACGTTCAACACGTTCCATGGCGGAGCCGGCGGAAGGAGCAACG
GCGGCGGTAATCCGGATGCAAACAGCAATGGTGAAAGACTGAACAACAAT
CGGTCGGAAAACATTTACGATCAAATACCAAACGAGCAATTCTACGACGC
TCCCTATGAGATGCGCACCAATGATGAGGTTTACGAACCGGAACCGGTGG
CCAGTAATGTCATCACCATCAATGGGATTTCCGTCAGATAGAAGCTTTCT
AGACCAT
BS11439.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:38:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fw-RC | 3525 | CG1500-PC | 1..3525 | 17..3541 | 17625 | 100 | Plus |
| fw-RA | 3525 | CG1500-PA | 1..3525 | 17..3541 | 17625 | 100 | Plus |
| fw-RB | 2268 | CG1500-PB | 1..2268 | 1274..3541 | 11340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:38:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fw-RC | 4318 | CG1500-RC | 212..3737 | 17..3542 | 17630 | 100 | Plus |
| fw-RA | 4698 | CG1500-RA | 592..4117 | 17..3542 | 17630 | 100 | Plus |
| fw-RB | 3938 | CG1500-RB | 1..3357 | 186..3542 | 16785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:38:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11993792..11994316 | 3407..2883 | 2625 | 100 | Minus |
| X | 23542271 | X | 11997085..11997564 | 926..447 | 2400 | 100 | Minus |
| X | 23542271 | X | 11995463..11995872 | 2108..1699 | 2050 | 100 | Minus |
| X | 23542271 | X | 11994377..11994730 | 2882..2529 | 1770 | 100 | Minus |
| X | 23542271 | X | 11995936..11996231 | 1699..1404 | 1480 | 100 | Minus |
| X | 23542271 | X | 11998238..11998500 | 448..186 | 1315 | 100 | Minus |
| X | 23542271 | X | 11995185..11995364 | 2288..2109 | 900 | 100 | Minus |
| X | 23542271 | X | 11996392..11996568 | 1403..1227 | 885 | 100 | Minus |
| X | 23542271 | X | 12001928..12002096 | 185..17 | 845 | 100 | Minus |
| X | 23542271 | X | 11996855..11997009 | 1077..923 | 775 | 100 | Minus |
| X | 23542271 | X | 11996641..11996791 | 1226..1076 | 755 | 100 | Minus |
| X | 23542271 | X | 11993496..11993631 | 3542..3407 | 680 | 100 | Minus |
| X | 23542271 | X | 11994993..11995121 | 2416..2288 | 645 | 100 | Minus |
| X | 23542271 | X | 11994815..11994927 | 2528..2416 | 565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:38:06 has no hits.
BS11439.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:03:51 Download gff for
BS11439.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fw-RA | 595..4112 | 24..3541 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:53:20 Download gff for
BS11439.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fw-RA | 599..4116 | 24..3541 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:14 Download gff for
BS11439.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fw-RA | 599..4116 | 24..3541 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:14 Download gff for
BS11439.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12001928..12002089 | 24..185 | 100 | | Minus |
| X | 11998238..11998500 | 186..448 | 100 | <- | Minus |
| X | 11995185..11995364 | 2109..2288 | 100 | <- | Minus |
| X | 11993497..11993630 | 3408..3541 | 100 | <- | Minus |
| X | 11993792..11994316 | 2883..3407 | 100 | <- | Minus |
| X | 11994377..11994730 | 2529..2882 | 100 | <- | Minus |
| X | 11994815..11994927 | 2416..2528 | 100 | <- | Minus |
| X | 11994994..11995120 | 2289..2415 | 100 | <- | Minus |
| X | 11995463..11995871 | 1700..2108 | 100 | <- | Minus |
| X | 11995936..11996231 | 1404..1699 | 100 | <- | Minus |
| X | 11996392..11996568 | 1227..1403 | 100 | <- | Minus |
| X | 11996641..11996790 | 1077..1226 | 100 | <- | Minus |
| X | 11996856..11997008 | 924..1076 | 100 | <- | Minus |
| X | 11997088..11997562 | 449..923 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:53:20 Download gff for
BS11439.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11890425..11890601 | 1227..1403 | 100 | <- | Minus |
| arm_X | 11890674..11890823 | 1077..1226 | 100 | <- | Minus |
| arm_X | 11890889..11891041 | 924..1076 | 100 | <- | Minus |
| arm_X | 11889969..11890264 | 1404..1699 | 100 | <- | Minus |
| arm_X | 11887530..11887663 | 3408..3541 | 100 | <- | Minus |
| arm_X | 11887825..11888349 | 2883..3407 | 100 | <- | Minus |
| arm_X | 11888410..11888763 | 2529..2882 | 100 | <- | Minus |
| arm_X | 11888848..11888960 | 2416..2528 | 100 | <- | Minus |
| arm_X | 11889027..11889153 | 2289..2415 | 100 | <- | Minus |
| arm_X | 11889218..11889397 | 2109..2288 | 100 | <- | Minus |
| arm_X | 11889496..11889904 | 1700..2108 | 100 | <- | Minus |
| arm_X | 11891121..11891595 | 449..923 | 100 | <- | Minus |
| arm_X | 11892271..11892533 | 186..448 | 100 | <- | Minus |
| arm_X | 11895961..11896122 | 24..185 | 100 | | Minus |
BS11439.pep Sequence
Translation from 16 to 3540
> BS11439.pep
MFCCNIPVDASVATSTSTSISTYPLQRATKRAMTPPNAMALIMLLLLALC
AAGNGQICGPPAVPLNAKVRTITVDSQIAEAHYECDAGYELFGPSAVKCD
RRTGWDRDLPFCGVNVAYRKPVNQSSYTRSGPASYANDGKPGNKNPDGQE
CSETQKEPSPWWRVDLLTPQAVHVVRITTRGCCGHQPLQDLEIRVGNSSA
DLQRNPLCAWYPGTLDEGVVKTFTCARPLVGQYVAIQLVGVEGSLSLCEV
ETFTNDEFSVDRCLSPKIGVDTVVTTFSKTCYDFHITKGESFDKAQAICK
QTGGDLVHDFRGATSSYILSELERRKSELKPQLVWIGAQKEPGITSRTWK
WVNGDVVQKPTWGKDQPNNYNGEQNCVVLDGGRNWLWNDVGCNLDYLHFI
CQHSPLSCGSPDAQQNTTVMGKKFTLGEKIQYTCPKGHSLLGQTERECRL
DGTWSGSSPTCKYVDCGSLPELKFGSIHMSEERTSFGVVATYSCHENYTL
IGNENRTCAMDGWSGKQPECLVDWCPDPQPIAGGDVRFNDKRAGSTATYV
CEPGYVLVGEAIISCGLGGEWSSKTPSCRFVDCGAPARPNRGIAILLNGT
TTVNSVVKYECDEDHWLDGQSELYCTREGKWSGEAPVCELVTCETPSVPS
GSFVIGYDYNVHSKIQYNCDPGHIMHGTPVLECLDSGEWSADAPYCEYID
CGTILPIPYGSHKYVTNTTYVGSEVVFSCSQSHKLSGVLKRTCLESAVWS
DASPKCEEIRCPEPKLAAHSLLSVTGNDRMYGRTLIRTSESSQNTAQTYK
IGALAKYRCERGYKMVGEALATCTDSGQWSGTIPECVYVECGAPEGINNG
KVVLATNATYYGAAVLYECNVNFKLNGVSRRLCTEHGNWSHEAPECVEVV
CDTPNINENLIVEAGPRAVGSVATFKCAKGRIMMGNDTRVCQKNGKWTGK
SPTCRPVDCGRPLAIENGRVIVVNDSTLYGGSAEYHCIPNYNRIGQYLRK
CTEDGAWSGKQPRCELATAEGQETSELGTGVGIGATVIVALLVIFGLIFL
YRNKARPVKNTENVQAAETKDERNAAVMSYSTLEANNRMHMDNNPSATFN
TFHGGAGGRSNGGGNPDANSNGERLNNNRSENIYDQIPNEQFYDAPYEMR
TNDEVYEPEPVASNVITINGISVR*
BS11439.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:37:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fw-PC | 1174 | CG1500-PC | 1..1174 | 1..1174 | 6410 | 100 | Plus |
| fw-PA | 1174 | CG1500-PA | 1..1174 | 1..1174 | 6410 | 100 | Plus |
| fw-PB | 755 | CG1500-PB | 1..755 | 420..1174 | 4125 | 100 | Plus |
| CG9095-PA | 955 | CG9095-PA | 13..555 | 35..578 | 760 | 32.5 | Plus |
| CG9095-PD | 961 | CG9095-PD | 13..555 | 35..578 | 760 | 32.5 | Plus |
| fw-PB | 755 | CG1500-PB | 222..596 | 406..757 | 587 | 32.8 | Plus |
| CG9095-PA | 955 | CG9095-PA | 386..573 | 529..708 | 281 | 33.5 | Plus |
| CG9095-PA | 955 | CG9095-PA | 387..558 | 708..899 | 278 | 30.7 | Plus |
| CG9095-PA | 955 | CG9095-PA | 380..559 | 642..840 | 274 | 31 | Plus |
| CG9095-PA | 955 | CG9095-PA | 381..570 | 583..771 | 269 | 30.9 | Plus |
| CG9095-PA | 955 | CG9095-PA | 398..555 | 799..954 | 231 | 31 | Plus |
| CG9095-PA | 955 | CG9095-PA | 381..555 | 841..1014 | 219 | 30.7 | Plus |
| CG9095-PA | 955 | CG9095-PA | 400..501 | 919..1020 | 175 | 30.4 | Plus |
