Clone BS11443 Report

Search the DGRC for BS11443

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:114
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptCG32982-RB
Protein status:BS11443.pep: full length peptide match
Sequenced Size:1685

Clone Sequence Records

BS11443.3prime Sequence

864 bp (763 high quality bases) assembled on 2006-05-08

> BS11443.3prime
ATGGTCTAGAAAGCTTTTACCACATATTTTCTGATTCTTCTCGAAACTTA
AGGCCCTGGGCTTCGTTGATGATGGCGGCCAGGGCGGGATGTTGGTAGCG
CTCCCGGAAAATGGCCGATCCGTTTATGCGATCCGATCCGTTGGTGTTGC
CATTCAGGGTGCCCATGTTCCCATTCCCATTGCCATAGTGCATCATCGTC
AGTTTGTGCTGCGGCGTATGCTGTGGCGTCAGTGATGTGGGGGGCGTGGC
ATTACCGTTCTTATAGTAGCGATTCTGGTTGGGATCGTAAGTGGCCTGCT
CCTGATTCTGATTGAGACGATTGGCCATCTTGATGGAGGCACAGCGATCC
TCCTCGTTGTTGCGCATCTTCAAGATGCGTTGATCCTGCACCGAGTATCT
CGATCCGTTCAGGGAATTCAACTGATTGAGATTGCTTACTTGGGTGCTCA
GCTTTTTGGCTCGAAAACTGCCGCCTGGCGATGAGTTATTCAGCAGTGTT
CCCCTCGACGAACTGCCATTGGTCTCTGTGCTGTCCCTGCTCGCCTCCCG
GTAGCTCGAGGGGCGGTGCGTCGATGGGGGCGTGTCCAGGCCACTATCAT
GGGCCGAACAGTCCAGTTCGGTTTTGGCCAGCCCGATGTTGCTGCCGCCG
CCAGTGGGTAACATTGGTTGAACTGAGTGCCTCATATCAGTGGGCGCCCT
TGGCTTCCGGTACAGCCAATCGCGGTCCAGTTCGTTGCCATTATCCGGAG
TAGCGCTAACTCCCCGGAACAGTCTGGGTCTCCTCAGCTGAACCTCCGTC
TCCTCGGTCTCCTCATCCACCACCTGATTGGAACCGAAGCTGCTGGTGAT
AAAGATCCGCCTAG

BS11443.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-PB 1653 CG32982-RB 806..1653 864..17 4215 99.8 Minus
CG32982-PC 1716 CG32982-RC 869..1716 864..17 4215 99.8 Minus
CG32982-PA 2148 CG32982-RA 1223..1648 864..439 2105 99.7 Minus
CG32982-PA 2148 CG32982-RA 1648..1994 385..39 1735 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RE 3397 CG32982-RE 1992..2840 864..16 4230 99.9 Minus
CG32982-RD 3241 CG32982-RD 1836..2684 864..16 4230 99.9 Minus
CG32982-RB 2426 CG32982-RB 1021..1869 864..16 4230 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9162074..9162708 674..40 3175 100 Minus
2L 23513712 2L 9161821..9162012 864..673 945 99.5 Minus
Blast to na_te.dros performed on 2015-02-10 18:40:43 has no hits.

BS11443.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:09:17 Download gff for BS11443.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PB 806..1653 17..864 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:39:54 Download gff for BS11443.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PC 869..1716 17..864 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 15:02:27 Download gff for BS11443.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RB 1021..1869 16..864 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:59:39 Download gff for BS11443.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RB 1021..1869 16..864 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:59:39 Download gff for BS11443.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 9161821..9162012 673..864 99 -> Minus
2L 9162076..9162708 40..672 100 -> Minus
2L 9163141..9163164 16..39 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 15:02:27 Download gff for BS11443.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9161821..9162012 673..864 99 -> Minus
arm_2L 9162076..9162708 40..672 100 -> Minus
arm_2L 9163141..9163164 16..39 100   Minus

BS11443.5prime Sequence

860 bp (801 high quality bases) assembled on 2006-05-08

> BS11443.5prime
GAAGTTATCAGTCGACATGATTTTTTCCACGGATTTGCATTGGCAATCCT
TGCTGGCAGGACGCATTCCGGTGGCCTCCATGACAGGACCCATTAAACGC
GGACTGCTCTGGCAGCAAAGGGATCGGCTCTTCTCTCGCTGGAAGGAGCG
ATACTTTGTGCTCACTCGTGACTACTTGCACTGCTTCAAAAGAGCCTCGG
GATCGGCCAATGAACGTGCCTCGGATATGGGACAGTTTATCTTCAAGGTC
AAGCTGGTGGACGTGGAGAAGGTGGAGTGGGTGAATCGGCGCTCCTACAG
CGCCATTGGTCTGCTACTGGGTCGCGAGGGTCGTGTTCTACTCCGCTGCG
ATGATGGCCTCGAGGATTGGTTCGAGCTGCTGGAGGAATGCACAATGACC
TCCAAGGAGCGCAGACGAGCCCTGAAGATTGCCCAAGGACCCAGATCCCG
AGCCTCATTGGCTGCTCCCGTTTCGCATGCTTCGCTGCAGTTCCAGCATT
TTGGACTCGGAGGCACTTACTCGAGTGCCCTGGACGATTGGCTGATGACG
AATGGAACCGGTGGTCTGGCCCGGCACAAGATTGGAGCTGGCAGTCTGAA
CGGTTATGGCGGGGCCAATCCCTTCCTGTTCTCCGATTCGGTGCCGGATC
TGAGTGCCCTGAACAACGAAAACCACAATCATCACCTGAGCGGCATCAGC
ACGAACCACTCGACGCCGCAAAAGATACCGCACCACAGCAATGCGAATCT
CAGTCGATACTCCAATGGATATGTCTCGGCCCAGAACAGTTTCACCCAAG
CCGGAGCACTCTACGGATCGCCTAGGCGGATCTTTATAACAGCAGCCTCG
GTTCCATCAG

BS11443.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-PB 1653 CG32982-RB 1..821 17..837 4080 99.8 Plus
CG32982-PA 2148 CG32982-RA 444..1238 43..837 3950 99.8 Plus
CG32982-PC 1716 CG32982-RC 91..884 44..837 3945 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:30:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RB 2426 CG32982-RB 216..1056 17..856 4150 99.6 Plus
CG32982-RD 3241 CG32982-RD 1057..1871 43..856 4020 99.6 Plus
CG32982-RG 2766 CG32982-RG 790..1604 43..856 4020 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:30:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9161383..9161856 384..856 2305 99.6 Plus
2L 23513712 2L 9161129..9161269 246..386 690 99.3 Plus
2L 23513712 2L 9154658..9154765 43..150 540 100 Plus
2L 23513712 2L 9156497..9156596 150..249 500 100 Plus
Blast to na_te.dros performed on 2015-02-13 08:30:31 has no hits.

BS11443.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:09:18 Download gff for BS11443.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PB 1..846 17..860 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:39:56 Download gff for BS11443.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PB 1..846 17..860 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:39:55 Download gff for BS11443.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RB 206..1061 8..860 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:16:43 Download gff for BS11443.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RB 206..1061 8..860 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:16:43 Download gff for BS11443.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9151404..9151440 8..43 91 -> Plus
2L 9154659..9154765 44..150 100 -> Plus
2L 9156498..9156594 151..247 100 -> Plus
2L 9161131..9161268 248..385 99 -> Plus
2L 9161385..9161841 386..842 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:39:55 Download gff for BS11443.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9151404..9151440 8..43 91 -> Plus
arm_2L 9154659..9154765 44..150 100 -> Plus
arm_2L 9156498..9156594 151..247 100 -> Plus
arm_2L 9161131..9161268 248..385 99 -> Plus
arm_2L 9161385..9161841 386..842 99 -> Plus

BS11443.complete Sequence

1685 bp assembled on 2009-08-24

GenBank Submission: KX805548

> BS11443.complete
GAAGTTATCAGTCGACATGATTTTTTCCACGGATTTGCATTGGCAATCCT
TGCTGGCAGGACGCATTCCGGTGGCCTCCATGACAGGACCCATTAAACGC
GGACTGCTCTGGCAGCAAAGGGATCGGCTCTTCTCTCGCTGGAAGGAGCG
ATACTTTGTGCTCACTCGTGACTACTTGCACTGCTTCAAAAGAGCCTCGG
GATCGGCCAATGAACGTGCCTCGGATATGGGACAGTTTATCTTCAAGGTC
AAGCTGGTGGACGTGGAGAAGGTGGAGTGGCTGAATCGGCGCTCCTACAG
CGCCATTGGTCTGCTACTGGGTCGCGAGGGTCGTGTTCTACTCCGCTGCG
ATGATGGCCTCGAGGATTGGTTCGAGCTGCTGGAGGAATGCACAATGACC
TCCAAGGAGCGCAGACGAGCCCTGAAGATTGCCCAAGGACCCAGATCCCG
AGCCTCATTGGCTGCTCCCGTTTCGCATGCTTCGCTGCAGTTCCAGCATT
TTGGACTCGGAGGCACTTACTCGAGTGCCCTGGACGATTGGCTGATGACG
AATGGAACCGGTGGTCTGGCCCGGCACAAGATTGGAGCTGGCAGTCTGAA
CGGTTATGGCGGGGCCAATCCCTTCCTGTTCTCCGATTCGGTGCCGGATC
TGAGTGCCCTGAACAACGAAAACCACAATCATCACCTGAGCGGCATCAGC
ACGAACCACTCGACGCCGCAAAAGATACCGCACCACAGCAATGCGAATCT
CAGTCGATACTCCAATGGATATGTCTCGGCCCAGAACAGTTTCACCCAAG
CCGGAGCACTCTACGGATCGCCTAGGCGGATCTTTATCAACAGCAGCTTC
GGTTCCAATCAGGTGGTGGATGAGGAGACCGAGGAGACGGAGGTTCAGCT
GAGGAGACCCAGACTGTTCCGGGGAGTTAGCGCTACTCCGGATAATGGCA
ACGAACTGGACCGCGATTGGCTGTACCGGAAGCCAAGGGCGCCCACTGAT
ATGAGGCACTCAGTTCAACCAATGTTACCCACTGGCGGCGGCAGCAACAT
CGGGCTGGCCAAAACCGAACTGGACTGTTCGGCCCATGATAGTGGCCTGG
ACACGCCCCCATCGACGCACCGCCCCTCGAGCTACCGGGAGGCGAGCAGG
GACAGCACAGAGACCAATGGCAGTTCGTCGAGGGGAACACTGCTGAATAA
CTCATCGCCAGGCGGCAGTTTTCGAGCCAAAAAGCTGAGCACCCAAGTAA
GCAATCTCAATCAGTTGAATTCCCTGAACGGATCGAGATACTCGGTGCAG
GATCAACGCATCTTGAAGATGCGCAACAACGAGGAGGATCGCTGTGCCTC
CATCAAGATGGCCAATCGTCTCAATCAGAATCAGGAGCAGGCCACTTACG
ATCCCAACCAGAATCGCTACTATAAGAACGGTAATGCCACGCCCCCCACA
TCACTGACGCCACAGCATACGCCGCAGCACAAACTGACGATGATGCACTA
TGGCAATGGGAATGGGAACATGGGCACCCTGAATGGCAACACCAACGGAT
CGGATCGCATAAACGGATCGGCCATTTTCCGGGAGCGCTACCAACATCCC
GCCCTGGCCGCCATCATCAACGAAGCCCAGGGCCTTAAGTTTCGAGAAGA
ATCAGAAAATATGTGGTAAAAGCTTTCTAGACCAT

BS11443.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RB 1653 CG32982-PB 1..1653 17..1669 8265 100 Plus
CG32982-RD 2337 CG32982-PD 711..2337 43..1669 8135 100 Plus
CG32982-RE 2382 CG32982-PE 757..2382 44..1669 8130 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RB 2426 CG32982-RB 216..1869 17..1670 8270 100 Plus
CG32982-RD 3241 CG32982-RD 1057..2684 43..1670 8140 100 Plus
CG32982-RE 3397 CG32982-RE 1214..2840 44..1670 8135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9162074..9162708 1012..1646 3175 100 Plus
2L 23513712 2L 9161383..9162012 384..1013 3150 100 Plus
2L 23513712 2L 9161129..9161269 246..386 705 100 Plus
2L 23513712 2L 9154658..9154765 43..150 540 100 Plus
2L 23513712 2L 9156497..9156596 150..249 500 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:29:24 has no hits.

BS11443.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:02 Download gff for BS11443.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RB 214..1864 17..1667 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:49:06 Download gff for BS11443.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RB 216..1866 17..1667 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:47 Download gff for BS11443.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RB 216..1866 17..1667 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:47 Download gff for BS11443.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9151414..9151440 17..43 100 -> Plus
2L 9154659..9154765 44..150 100 -> Plus
2L 9156498..9156594 151..247 100 -> Plus
2L 9161131..9161268 248..385 100 -> Plus
2L 9161385..9162012 386..1013 100 -> Plus
2L 9162076..9162708 1014..1646 100 -> Plus
2L 9163141..9163161 1647..1667 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:49:06 Download gff for BS11443.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9151414..9151440 17..43 100 -> Plus
arm_2L 9154659..9154765 44..150 100 -> Plus
arm_2L 9156498..9156594 151..247 100 -> Plus
arm_2L 9161131..9161268 248..385 100 -> Plus
arm_2L 9161385..9162012 386..1013 100 -> Plus
arm_2L 9162076..9162708 1014..1646 100 -> Plus
arm_2L 9163141..9163161 1647..1667 100   Plus

BS11443.pep Sequence

Translation from 16 to 1668

> BS11443.pep
MIFSTDLHWQSLLAGRIPVASMTGPIKRGLLWQQRDRLFSRWKERYFVLT
RDYLHCFKRASGSANERASDMGQFIFKVKLVDVEKVEWLNRRSYSAIGLL
LGREGRVLLRCDDGLEDWFELLEECTMTSKERRRALKIAQGPRSRASLAA
PVSHASLQFQHFGLGGTYSSALDDWLMTNGTGGLARHKIGAGSLNGYGGA
NPFLFSDSVPDLSALNNENHNHHLSGISTNHSTPQKIPHHSNANLSRYSN
GYVSAQNSFTQAGALYGSPRRIFINSSFGSNQVVDEETEETEVQLRRPRL
FRGVSATPDNGNELDRDWLYRKPRAPTDMRHSVQPMLPTGGGSNIGLAKT
ELDCSAHDSGLDTPPSTHRPSSYREASRDSTETNGSSSRGTLLNNSSPGG
SFRAKKLSTQVSNLNQLNSLNGSRYSVQDQRILKMRNNEEDRCASIKMAN
RLNQNQEQATYDPNQNRYYKNGNATPPTSLTPQHTPQHKLTMMHYGNGNG
NMGTLNGNTNGSDRINGSAIFRERYQHPALAAIINEAQGLKFREESENMW
*

BS11443.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-PB 550 CG32982-PB 1..550 1..550 2906 100 Plus
CG32982-PE 793 CG32982-PE 253..793 10..550 2853 100 Plus
CG32982-PD 778 CG32982-PD 238..778 10..550 2853 100 Plus
CG32982-PF 730 CG32982-PF 164..682 10..546 2701 96.3 Plus
CG32982-PG 720 CG32982-PG 149..667 10..546 2701 96.3 Plus