Clone Sequence Records
BS11451.5prime Sequence
669 bp (668 high quality bases) assembled on 2006-05-08
> BS11451.5prime
GAAGTTATCAGTCGACATGTGGCCAGCCGCCCTGACACGCCTGCTGAGAC
GCCGGATTGTGTACATCGTGCTGGTGGTACTGCTGCTCATCTACGGATTC
GGACACATTTTCGATCGGGACTCGTTTTCCGGCCTGCACTATGACGAGTA
TGTGGTGCAGCGCACACGACCGCTCCTGTGGACGCAGCAGCTTCTGGCGC
CGGAGGAGCAGCTCAATCGCACGCGCGGCGATCCCGAGGCACGCTGCCGC
AACTCTGTCCAGGGCCGCCAATGGCTGGCGGACGAGCGAGGATTCGTGTG
CCGACGCGAGGAGGTGCTAACCAACGGCTGCTGCAACCTGGAGCTGCCCG
GCATTGGATACTACAGCTGCCGCACATGCAATACCAGCACCCACTGTTGC
GGTGTTTATGAGTATTGCGTCTCCTGCTGCCTGCACCCCGGACAACAGCC
GCTGCTGGAGCGCGTCCTGCAGGCGCCCAACACGCCCAAGTACATCTTCG
CCAGCGTGACGGACCACTTCGAGCTGTGCCTGGTCAAGTGCCGCACGAAC
TCGCACTCCGTGGAGCACGAGAACAAGTACCGCGATCCGGCGGCCAAGCA
TTGTTATGGTCTAACCGATGCGCACGAATCCCAGCGTGATGTTGCGCCCC
AGTGAAAGCTTTCTAGACC
BS11451.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:09:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-PA | 639 | CG15643-RA | 1..639 | 17..655 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:45:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-RB | 1411 | CG15643-RB | 485..1123 | 17..655 | 3195 | 100 | Plus |
CG15643-RA | 1692 | CG15643-RA | 485..1123 | 17..655 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:45:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15570949..15571486 | 655..118 | 2690 | 100 | Minus |
X | 23542271 | X | 15571563..15571665 | 119..17 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:45:07 has no hits.
BS11451.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:09:36 Download gff for
BS11451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-PA | 1..639 | 17..655 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:40:19 Download gff for
BS11451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-PA | 1..639 | 17..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 01:01:32 Download gff for
BS11451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 481..1125 | 9..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:09:49 Download gff for
BS11451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 481..1125 | 9..659 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:09:49 Download gff for
BS11451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15570945..15571485 | 119..658 | 99 | <- | Minus |
X | 15571564..15571669 | 9..118 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 01:01:32 Download gff for
BS11451.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15464978..15465518 | 119..658 | 99 | <- | Minus |
arm_X | 15465597..15465702 | 9..118 | 96 | | Minus |
BS11451.3prime Sequence
669 bp (668 high quality bases) assembled on 2006-05-08
> BS11451.3prime
ATGGTCTAGAAAGCTTTCACTGGGGCGCAACATCACGCTGGGATTCGTGC
GCATCGGTTAGACCATAACAATGCTTGGCCGCCGGATCGCGGTACTTGTT
CTCGTGCTCCACGGAGTGCGAGTTCGTGCGGCACTTGACCAGGCACAGCT
CGAAGTGGTCCGTCACGCTGGCGAAGATGTACTTGGGCGTGTTGGGCGCC
TGCAGGACGCGCTCCAGCAGCGGCTGTTGTCCGGGGTGCAGGCAGCAGGA
GACGCAATACTCATAAACACCGCAACAGTGGGTGCTGGTATTGCATGTGC
GGCAGCTGTAGTATCCAATGCCGGGCAGCTCCAGGTTGCAGCAGCCGTTG
GTTAGCACCTCCTCGCGTCGGCACACGAATCCTCGCTCGTCCGCCAGCCA
TTGGCGGCCCTGGACAGAGTTGCGGCAGCGTGCCTCGGGATCGCCGCGCG
TGCGATTGAGCTGCTCCTCCGGCGCCAGAAGCTGCTGCGTCCACAGGAGC
GGTCGTGTGCGCTGCACCACATACTCGTCATAGTGCAGGCCGGAAAACGA
GTCCCGATCGAAAATGTGTCCGAATCCGTAGATGAGCAGCAGTACCACCA
GCACGATGTACACAATCCGGCGTCTCAGCAGGCGTGTCAGGGCGGCTGGC
CACATGTCGACTGATAACT
BS11451.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:09:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-PA | 639 | CG15643-RA | 1..639 | 655..17 | 3195 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:15:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-RB | 1411 | CG15643-RB | 485..1123 | 655..17 | 3195 | 100 | Minus |
CG15643-RA | 1692 | CG15643-RA | 485..1123 | 655..17 | 3195 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:15:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15570949..15571486 | 17..554 | 2690 | 100 | Plus |
X | 23542271 | X | 15571563..15571665 | 553..655 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 21:15:12 has no hits.
BS11451.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:09:35 Download gff for
BS11451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-PA | 1..639 | 17..655 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:40:18 Download gff for
BS11451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-PA | 1..639 | 17..655 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:10:55 Download gff for
BS11451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 481..1125 | 13..663 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:49:21 Download gff for
BS11451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 481..1125 | 13..663 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:49:21 Download gff for
BS11451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15570945..15571485 | 14..553 | 99 | <- | Plus |
X | 15571564..15571669 | 554..663 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:10:55 Download gff for
BS11451.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15464978..15465518 | 14..553 | 99 | <- | Plus |
arm_X | 15465597..15465702 | 554..663 | 96 | | Plus |
BS11451.complete Sequence
671 bp assembled on 2006-11-01
GenBank Submission: FJ636871
> BS11451.complete
GAAGTTATCAGTCGACATGTGGCCAGCCGCCCTGACACGCCTGCTGAGAC
GCCGGATTGTGTACATCGTGCTGGTGGTACTGCTGCTCATCTACGGATTC
GGACACATTTTCGATCGGGACTCGTTTTCCGGCCTGCACTATGACGAGTA
TGTGGTGCAGCGCACACGACCGCTCCTGTGGACGCAGCAGCTTCTGGCGC
CGGAGGAGCAGCTCAATCGCACGCGCGGCGATCCCGAGGCACGCTGCCGC
AACTCTGTCCAGGGCCGCCAATGGCTGGCGGACGAGCGAGGATTCGTGTG
CCGACGCGAGGAGGTGCTAACCAACGGCTGCTGCAACCTGGAGCTGCCCG
GCATTGGATACTACAGCTGCCGCACATGCAATACCAGCACCCACTGTTGC
GGTGTTTATGAGTATTGCGTCTCCTGCTGCCTGCACCCCGGACAACAGCC
GCTGCTGGAGCGCGTCCTGCAGGCGCCCAACACGCCCAAGTACATCTTCG
CCAGCGTGACGGACCACTTCGAGCTGTGCCTGGTCAAGTGCCGCACGAAC
TCGCACTCCGTGGAGCACGAGAACAAGTACCGCGATCCGGCGGCCAAGCA
TTGTTATGGTCTAACCGATGCGCACGAATCCCAGCGTGATGTTGCGCCCC
AGTGAAAGCTTTCTAGACCAT
BS11451.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:00:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-RB | 639 | CG15643-PB | 1..639 | 17..655 | 3195 | 100 | Plus |
CG15643-RA | 639 | CG15643-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:00:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-RB | 1411 | CG15643-RB | 485..1123 | 17..655 | 3195 | 100 | Plus |
CG15643-RA | 1692 | CG15643-RA | 485..1123 | 17..655 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:00:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15570949..15571486 | 655..118 | 2690 | 100 | Minus |
X | 23542271 | X | 15571563..15571665 | 119..17 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:00:34 has no hits.
BS11451.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:50:42 Download gff for
BS11451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 1..639 | 17..655 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:25:47 Download gff for
BS11451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 434..1078 | 9..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:11 Download gff for
BS11451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 485..1122 | 17..654 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:50:42 Download gff for
BS11451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 434..1078 | 9..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:01:17 Download gff for
BS11451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15643-RA | 485..1122 | 17..654 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:17 Download gff for
BS11451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15570950..15571485 | 119..654 | 100 | <- | Minus |
X | 15571564..15571665 | 17..118 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:11 Download gff for
BS11451.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15464983..15465518 | 119..654 | 100 | <- | Minus |
arm_X | 15465597..15465698 | 17..118 | 100 | | Minus |
BS11451.pep Sequence
Translation from 16 to 654
> BS11451.pep
MWPAALTRLLRRRIVYIVLVVLLLIYGFGHIFDRDSFSGLHYDEYVVQRT
RPLLWTQQLLAPEEQLNRTRGDPEARCRNSVQGRQWLADERGFVCRREEV
LTNGCCNLELPGIGYYSCRTCNTSTHCCGVYEYCVSCCLHPGQQPLLERV
LQAPNTPKYIFASVTDHFELCLVKCRTNSHSVEHENKYRDPAAKHCYGLT
DAHESQRDVAPQ*
BS11451.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:43:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15643-PB | 212 | CG15643-PB | 1..212 | 1..212 | 1173 | 100 | Plus |
CG15643-PA | 212 | CG15643-PA | 1..212 | 1..212 | 1173 | 100 | Plus |