Clone BS11451 Report

Search the DGRC for BS11451

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:114
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG15643-RA
Protein status:BS11451.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS11451.5prime Sequence

669 bp (668 high quality bases) assembled on 2006-05-08

> BS11451.5prime
GAAGTTATCAGTCGACATGTGGCCAGCCGCCCTGACACGCCTGCTGAGAC
GCCGGATTGTGTACATCGTGCTGGTGGTACTGCTGCTCATCTACGGATTC
GGACACATTTTCGATCGGGACTCGTTTTCCGGCCTGCACTATGACGAGTA
TGTGGTGCAGCGCACACGACCGCTCCTGTGGACGCAGCAGCTTCTGGCGC
CGGAGGAGCAGCTCAATCGCACGCGCGGCGATCCCGAGGCACGCTGCCGC
AACTCTGTCCAGGGCCGCCAATGGCTGGCGGACGAGCGAGGATTCGTGTG
CCGACGCGAGGAGGTGCTAACCAACGGCTGCTGCAACCTGGAGCTGCCCG
GCATTGGATACTACAGCTGCCGCACATGCAATACCAGCACCCACTGTTGC
GGTGTTTATGAGTATTGCGTCTCCTGCTGCCTGCACCCCGGACAACAGCC
GCTGCTGGAGCGCGTCCTGCAGGCGCCCAACACGCCCAAGTACATCTTCG
CCAGCGTGACGGACCACTTCGAGCTGTGCCTGGTCAAGTGCCGCACGAAC
TCGCACTCCGTGGAGCACGAGAACAAGTACCGCGATCCGGCGGCCAAGCA
TTGTTATGGTCTAACCGATGCGCACGAATCCCAGCGTGATGTTGCGCCCC
AGTGAAAGCTTTCTAGACC

BS11451.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-PA 639 CG15643-RA 1..639 17..655 3195 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:45:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-RB 1411 CG15643-RB 485..1123 17..655 3195 100 Plus
CG15643-RA 1692 CG15643-RA 485..1123 17..655 3195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:45:04
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15570949..15571486 655..118 2690 100 Minus
X 23542271 X 15571563..15571665 119..17 515 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:45:07 has no hits.

BS11451.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:09:36 Download gff for BS11451.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-PA 1..639 17..655 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:40:19 Download gff for BS11451.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-PA 1..639 17..655 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 01:01:32 Download gff for BS11451.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 481..1125 9..659 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:09:49 Download gff for BS11451.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 481..1125 9..659 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:09:49 Download gff for BS11451.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15570945..15571485 119..658 99 <- Minus
X 15571564..15571669 9..118 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 01:01:32 Download gff for BS11451.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15464978..15465518 119..658 99 <- Minus
arm_X 15465597..15465702 9..118 96   Minus

BS11451.3prime Sequence

669 bp (668 high quality bases) assembled on 2006-05-08

> BS11451.3prime
ATGGTCTAGAAAGCTTTCACTGGGGCGCAACATCACGCTGGGATTCGTGC
GCATCGGTTAGACCATAACAATGCTTGGCCGCCGGATCGCGGTACTTGTT
CTCGTGCTCCACGGAGTGCGAGTTCGTGCGGCACTTGACCAGGCACAGCT
CGAAGTGGTCCGTCACGCTGGCGAAGATGTACTTGGGCGTGTTGGGCGCC
TGCAGGACGCGCTCCAGCAGCGGCTGTTGTCCGGGGTGCAGGCAGCAGGA
GACGCAATACTCATAAACACCGCAACAGTGGGTGCTGGTATTGCATGTGC
GGCAGCTGTAGTATCCAATGCCGGGCAGCTCCAGGTTGCAGCAGCCGTTG
GTTAGCACCTCCTCGCGTCGGCACACGAATCCTCGCTCGTCCGCCAGCCA
TTGGCGGCCCTGGACAGAGTTGCGGCAGCGTGCCTCGGGATCGCCGCGCG
TGCGATTGAGCTGCTCCTCCGGCGCCAGAAGCTGCTGCGTCCACAGGAGC
GGTCGTGTGCGCTGCACCACATACTCGTCATAGTGCAGGCCGGAAAACGA
GTCCCGATCGAAAATGTGTCCGAATCCGTAGATGAGCAGCAGTACCACCA
GCACGATGTACACAATCCGGCGTCTCAGCAGGCGTGTCAGGGCGGCTGGC
CACATGTCGACTGATAACT

BS11451.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:09:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-PA 639 CG15643-RA 1..639 655..17 3195 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:15:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-RB 1411 CG15643-RB 485..1123 655..17 3195 100 Minus
CG15643-RA 1692 CG15643-RA 485..1123 655..17 3195 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15570949..15571486 17..554 2690 100 Plus
X 23542271 X 15571563..15571665 553..655 515 100 Plus
Blast to na_te.dros performed on 2015-02-10 21:15:12 has no hits.

BS11451.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:09:35 Download gff for BS11451.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-PA 1..639 17..655 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:40:18 Download gff for BS11451.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-PA 1..639 17..655 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:10:55 Download gff for BS11451.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 481..1125 13..663 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:49:21 Download gff for BS11451.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 481..1125 13..663 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:49:21 Download gff for BS11451.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15570945..15571485 14..553 99 <- Plus
X 15571564..15571669 554..663 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:10:55 Download gff for BS11451.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15464978..15465518 14..553 99 <- Plus
arm_X 15465597..15465702 554..663 96   Plus

BS11451.complete Sequence

671 bp assembled on 2006-11-01

GenBank Submission: FJ636871

> BS11451.complete
GAAGTTATCAGTCGACATGTGGCCAGCCGCCCTGACACGCCTGCTGAGAC
GCCGGATTGTGTACATCGTGCTGGTGGTACTGCTGCTCATCTACGGATTC
GGACACATTTTCGATCGGGACTCGTTTTCCGGCCTGCACTATGACGAGTA
TGTGGTGCAGCGCACACGACCGCTCCTGTGGACGCAGCAGCTTCTGGCGC
CGGAGGAGCAGCTCAATCGCACGCGCGGCGATCCCGAGGCACGCTGCCGC
AACTCTGTCCAGGGCCGCCAATGGCTGGCGGACGAGCGAGGATTCGTGTG
CCGACGCGAGGAGGTGCTAACCAACGGCTGCTGCAACCTGGAGCTGCCCG
GCATTGGATACTACAGCTGCCGCACATGCAATACCAGCACCCACTGTTGC
GGTGTTTATGAGTATTGCGTCTCCTGCTGCCTGCACCCCGGACAACAGCC
GCTGCTGGAGCGCGTCCTGCAGGCGCCCAACACGCCCAAGTACATCTTCG
CCAGCGTGACGGACCACTTCGAGCTGTGCCTGGTCAAGTGCCGCACGAAC
TCGCACTCCGTGGAGCACGAGAACAAGTACCGCGATCCGGCGGCCAAGCA
TTGTTATGGTCTAACCGATGCGCACGAATCCCAGCGTGATGTTGCGCCCC
AGTGAAAGCTTTCTAGACCAT

BS11451.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:00:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-RB 639 CG15643-PB 1..639 17..655 3195 100 Plus
CG15643-RA 639 CG15643-PA 1..639 17..655 3195 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:00:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-RB 1411 CG15643-RB 485..1123 17..655 3195 100 Plus
CG15643-RA 1692 CG15643-RA 485..1123 17..655 3195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:00:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15570949..15571486 655..118 2690 100 Minus
X 23542271 X 15571563..15571665 119..17 515 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:00:34 has no hits.

BS11451.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:50:42 Download gff for BS11451.complete
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 1..639 17..655 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:25:47 Download gff for BS11451.complete
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 434..1078 9..659 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:11 Download gff for BS11451.complete
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 485..1122 17..654 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:50:42 Download gff for BS11451.complete
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 434..1078 9..659 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:01:17 Download gff for BS11451.complete
Subject Subject Range Query Range Percent Splice Strand
CG15643-RA 485..1122 17..654 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:17 Download gff for BS11451.complete
Subject Subject Range Query Range Percent Splice Strand
X 15570950..15571485 119..654 100 <- Minus
X 15571564..15571665 17..118 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:11 Download gff for BS11451.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15464983..15465518 119..654 100 <- Minus
arm_X 15465597..15465698 17..118 100   Minus

BS11451.pep Sequence

Translation from 16 to 654

> BS11451.pep
MWPAALTRLLRRRIVYIVLVVLLLIYGFGHIFDRDSFSGLHYDEYVVQRT
RPLLWTQQLLAPEEQLNRTRGDPEARCRNSVQGRQWLADERGFVCRREEV
LTNGCCNLELPGIGYYSCRTCNTSTHCCGVYEYCVSCCLHPGQQPLLERV
LQAPNTPKYIFASVTDHFELCLVKCRTNSHSVEHENKYRDPAAKHCYGLT
DAHESQRDVAPQ*

BS11451.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:43:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG15643-PB 212 CG15643-PB 1..212 1..212 1173 100 Plus
CG15643-PA 212 CG15643-PA 1..212 1..212 1173 100 Plus