Clone Sequence Records
BS11482.3prime Sequence
773 bp (757 high quality bases) assembled on 2006-05-08
> BS11482.3prime
ATGGTCTAGAAAGCTTCTAGTTGCGCTCTCTGTGCAATTTCTCTGTCTCC
GCCCGCAAGTCCCGAAAGGCTTCCTGGATTTTGTCTGTAATGAGCTTCCG
CGCCGTTGGCTCCGGTACTTGTCGTTTTTTTAGGTCCAGAATAAAGTCGT
TGAGGTCCAATGGCTGGCCAACATTCAGCGTCACCTGCTTACCACGCTGT
ATCACATAGGGCTCCACATTGGGCAACAGATCGTCCATGCCCTCGTGCCA
CATGGGCAGAATTATGGGGATCTTTGGCGACTCGTAGATGATCCTGCCCA
CGCCCCACTTGAGACGCAGCTCCTCCTTATCCATGTTCACCTTACCTTCG
GGAAACACATGGATCCAATGGCCCAGTGCGGCCTTCTCGATGCACAGGTT
GATGGCATCCTGGTAGACACCGATGCCACGCACAACAGGTATGCACTTGC
CAAACATGAAGAAGAGCGAGTGCAGCTTGTTAGTGAAGCAAATGTCGTGA
GCGGCCATTGACCAACGAATTTTATAGGTATTGCAGACAATTCCCAGGGG
AAGGCAGCCCCACAGCCCAGGATCGTCGAAGCAGGAGTAGTGGTTGGACA
CGGTGACCAGGGGAATGCCCTTGGGTCGCTTCGTTATCAGCTGGATCAGT
CGCTCCCTGTTATAGACGCGGGGTTTATTCAAAAACATCAGCACAACCTT
GCTGAAGATTCCAACGGCGGAGACGACGAACTGGCTGACCACGTACCAGA
ACTTCGAGGGGTTTCTCAGCCTA
BS11482.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:09:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8766-PA | 1137 | tafazzin-RA | 381..1137 | 773..17 | 3785 | 100 | Minus |
CG8766-PB | 837 | tafazzin-RB | 81..837 | 773..17 | 3785 | 100 | Minus |
CG8766-PC | 1017 | tafazzin-RC | 261..1017 | 773..17 | 3785 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:49:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taz-RD | 1323 | CG8766-RD | 360..1118 | 773..15 | 3795 | 100 | Minus |
Taz-RC | 1174 | CG8766-RC | 328..1086 | 773..15 | 3795 | 100 | Minus |
Taz-RB | 1625 | CG8766-RB | 586..1344 | 773..15 | 3795 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:48:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12753427..12753817 | 61..451 | 1955 | 100 | Plus |
2R | 25286936 | 2R | 12753890..12754127 | 450..687 | 1190 | 100 | Plus |
2R | 25286936 | 2R | 12754408..12754493 | 688..773 | 430 | 100 | Plus |
2R | 25286936 | 2R | 12753307..12753354 | 15..62 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:49:01 has no hits.
BS11482.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:10:35 Download gff for
BS11482.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8766-PC | 262..1017 | 17..772 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:41:37 Download gff for
BS11482.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8766-PC | 262..1017 | 17..772 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:43:31 Download gff for
BS11482.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taz-RB | 587..1344 | 15..772 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:51:48 Download gff for
BS11482.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taz-RB | 587..1344 | 15..772 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:51:48 Download gff for
BS11482.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12753307..12753353 | 15..61 | 100 | <- | Plus |
2R | 12753428..12753816 | 62..450 | 100 | <- | Plus |
2R | 12753891..12754127 | 451..687 | 100 | <- | Plus |
2R | 12754408..12754492 | 688..772 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:43:31 Download gff for
BS11482.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8640812..8640858 | 15..61 | 100 | <- | Plus |
arm_2R | 8640933..8641321 | 62..450 | 100 | <- | Plus |
arm_2R | 8641396..8641632 | 451..687 | 100 | <- | Plus |
arm_2R | 8641913..8641997 | 688..772 | 100 | | Plus |
BS11482.5prime Sequence
817 bp (796 high quality bases) assembled on 2006-05-08
> BS11482.5prime
GAAGTTATCAGTCGACATGTTTATGGTCGTGTGTTCCAATTTAAGGCGTC
CCGGGCACGTGGGCGCCGCATCTGCAGCGCGAAATATAAACTGGCTGATC
AGCGAGGGATATACACCGCCGATCCGGGCAATGGCGCGGCCATACGTCCA
AGCTCCGGAGGCGCGGCCAGTGCCCGATGAGCGCTATCCGGGCAGCCAGC
AGGATAGGAAGGATATCGCCACCCAGACTGTGCGGAGCAGCAAGCCCAAA
GACCTGCGACCGCCTTCGCCGCCGACGCCGTCCCAGACCCTAAACTCCTC
TTCCCTTCCGCCCCCAATGTCCGACCAGGATGCTGATCCCTCCCTGGATG
TGCCCACCGGCGTGGCGATGCCCTACAACATCGACTGGATATTCCCTAGG
CTGAGAAACCCCTCGAAGTTCTGGTACGTGGTCAGCCAGTTCGTCGTCTC
CGCCGTTGGAATCTTCAGCAAGGTTGTGCTGATGTTTTTGAATAAACCCC
GCGTCTATAACAGGGAGCGACTGATCCAGCTGATAACGAAGCGACCCAAG
GGCATTCCCCTGGTCACCGTGTCCAACCACTACTCCTGCTTCGACGATCC
TGGGCTGTGGGGCTGCCTTCCCCTGGGAATTGTCTGCAATACCTATAAAA
TTCGTTGGTCAATGGCCGCTCACGACATTTGCTTCACTAACAAGCTGCAC
TCGCTCTTCTTCATGTTTGGCAAGTGCATACCTGTTGTGCGTGGCATCGG
TGTCTACCAGGATGCCATCAACCTGTGCATCGAGAAGGCCGCACTGGGGC
ATTGGATCCATGTGTTT
BS11482.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:09:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8766-PA | 1137 | tafazzin-RA | 1..801 | 17..817 | 3980 | 99.8 | Plus |
CG8766-PC | 1017 | tafazzin-RC | 3..681 | 139..817 | 3370 | 99.8 | Plus |
CG8766-PB | 837 | tafazzin-RB | 1..501 | 317..817 | 2480 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:31:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taz-RA | 1776 | CG8766-RA | 357..1157 | 17..817 | 3990 | 99.9 | Plus |
Taz-RC | 1174 | CG8766-RC | 70..748 | 139..817 | 3380 | 99.9 | Plus |
Taz-RD | 1323 | CG8766-RD | 103..780 | 140..817 | 3375 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:31:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12754408..12754751 | 482..139 | 1720 | 100 | Minus |
2R | 25286936 | 2R | 12753890..12754127 | 720..483 | 1190 | 100 | Minus |
2R | 25286936 | 2R | 12755936..12756058 | 139..17 | 615 | 100 | Minus |
2R | 25286936 | 2R | 12753719..12753817 | 817..719 | 480 | 99 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:31:41 has no hits.
BS11482.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:10:36 Download gff for
BS11482.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8766-PA | 1..801 | 17..817 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:41:39 Download gff for
BS11482.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8766-PA | 1..801 | 17..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:18:29 Download gff for
BS11482.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taz-RA | 351..1157 | 11..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:46:24 Download gff for
BS11482.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taz-RA | 351..1157 | 11..817 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 23:46:24 Download gff for
BS11482.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12753719..12753816 | 720..817 | 98 | <- | Minus |
2R | 12753891..12754127 | 483..719 | 100 | <- | Minus |
2R | 12754408..12754750 | 140..482 | 100 | <- | Minus |
2R | 12755936..12756064 | 11..139 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:18:29 Download gff for
BS11482.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8643441..8643569 | 11..139 | 98 | | Minus |
arm_2R | 8641224..8641321 | 720..817 | 98 | <- | Minus |
arm_2R | 8641396..8641632 | 483..719 | 100 | <- | Minus |
arm_2R | 8641913..8642255 | 140..482 | 100 | <- | Minus |
BS11482.complete Sequence
1169 bp assembled on 2006-11-01
GenBank Submission: FJ636886
> BS11482.complete
GAAGTTATCAGTCGACATGTTTATGGTCGTGTGTTCCAATTTAAGGCGTC
CCGGGCACGTGGGCGCCGCATCTGCAGCGCGAAATATAAACTGGCTGATC
AGCGAGGGATATACACCGCCGATCCGGGCAATGGCGCGGCCATACGTCCA
AGCTCCGGAGGCGCGGCCAGTGCCCGATGAGCGCTATCCGGGCAGCCAGC
AGGATAGGAAGGATATCGCCACCCAGACTGTGCGGAGCAGCAAGCCCAAA
GACCTGCGACCGCCTTCGCCGCCGACGCCGTCCCAGACCCTAAACTCCTC
TTCCCTTCCGCCCCCAATGTCCGACCAGGATGCTGATCCCTCCCTGGATG
TGCCCACCGGCGTGGCGATGCCCTACAACATCGACTGGATATTCCCTAGG
CTGAGAAACCCCTCGAAGTTCTGGTACGTGGTCAGCCAGTTCGTCGTCTC
CGCCGTTGGAATCTTCAGCAAGGTTGTGCTGATGTTTTTGAATAAACCCC
GCGTCTATAACAGGGAGCGACTGATCCAGCTGATAACGAAGCGACCCAAG
GGCATTCCCCTGGTCACCGTGTCCAACCACTACTCCTGCTTCGACGATCC
TGGGCTGTGGGGCTGCCTTCCCCTGGGAATTGTCTGCAATACCTATAAAA
TTCGTTGGTCAATGGCCGCTCACGACATTTGCTTCACTAACAAGCTGCAC
TCGCTCTTCTTCATGTTTGGCAAGTGCATACCTGTTGTGCGTGGCATCGG
TGTCTACCAGGATGCCATCAACCTGTGCATCGAGAAGGCCGCACTGGGCC
ATTGGATCCATGTGTTTCCCGAAGGTAAGGTGAACATGGATAAGGAGGAG
CTGCGTCTCAAGTGGGGCGTGGGCAGGATCATCTACGAGTCGCCAAAGAT
CCCCATAATTCTGCCCATGTGGCACGAGGGCATGGACGATCTGTTGCCCA
ATGTGGAGCCCTATGTGATACAGCGTGGTAAGCAGGTGACGCTGAATGTT
GGCCAGCCATTGGACCTCAACGACTTTATTCTGGACCTAAAAAAACGACA
AGTACCGGAGCCAACGGCGCGGAAGCTCATTACAGACAAAATCCAGGAAG
CCTTTCGGGACTTGCGGGCGGAGACAGAGAAATTGCACAGAGAGCGCAAC
TAGAAGCTTTCTAGACCAT
BS11482.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:36:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taz-RA | 1137 | CG8766-PA | 1..1137 | 17..1153 | 5685 | 100 | Plus |
Taz-RC | 1017 | CG8766-PC | 3..1017 | 139..1153 | 5075 | 100 | Plus |
Taz-RD | 837 | CG8766-PD | 1..837 | 317..1153 | 4185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:36:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taz-RA | 1776 | CG8766-RA | 357..1495 | 17..1155 | 5695 | 100 | Plus |
Taz-RC | 1174 | CG8766-RC | 70..1086 | 139..1155 | 5085 | 100 | Plus |
Taz-RD | 1323 | CG8766-RD | 103..1118 | 140..1155 | 5080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:36:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12753427..12753817 | 1109..719 | 1955 | 100 | Minus |
2R | 25286936 | 2R | 12754408..12754751 | 482..139 | 1720 | 100 | Minus |
2R | 25286936 | 2R | 12753890..12754127 | 720..483 | 1190 | 100 | Minus |
2R | 25286936 | 2R | 12755936..12756058 | 139..17 | 615 | 100 | Minus |
2R | 25286936 | 2R | 12753307..12753354 | 1155..1108 | 240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:36:06 has no hits.
BS11482.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:50:08 Download gff for
BS11482.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tafazzin-RA | 1..1137 | 17..1153 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:25:10 Download gff for
BS11482.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tafazzin-RA | 347..1491 | 11..1155 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:33 Download gff for
BS11482.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taz-RA | 363..1493 | 23..1153 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:50:08 Download gff for
BS11482.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tafazzin-RA | 347..1491 | 11..1155 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:23:00 Download gff for
BS11482.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taz-RA | 363..1493 | 23..1153 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:23:00 Download gff for
BS11482.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12753309..12753353 | 1109..1153 | 100 | <- | Minus |
2R | 12753428..12753816 | 720..1108 | 100 | <- | Minus |
2R | 12753891..12754127 | 483..719 | 100 | <- | Minus |
2R | 12754408..12754750 | 140..482 | 100 | <- | Minus |
2R | 12755936..12756052 | 23..139 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:33 Download gff for
BS11482.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8640814..8640858 | 1109..1153 | 100 | <- | Minus |
arm_2R | 8640933..8641321 | 720..1108 | 100 | <- | Minus |
arm_2R | 8641396..8641632 | 483..719 | 100 | <- | Minus |
arm_2R | 8641913..8642255 | 140..482 | 100 | <- | Minus |
arm_2R | 8643441..8643557 | 23..139 | 100 | | Minus |
BS11482.pep Sequence
Translation from 16 to 1152
> BS11482.pep
MFMVVCSNLRRPGHVGAASAARNINWLISEGYTPPIRAMARPYVQAPEAR
PVPDERYPGSQQDRKDIATQTVRSSKPKDLRPPSPPTPSQTLNSSSLPPP
MSDQDADPSLDVPTGVAMPYNIDWIFPRLRNPSKFWYVVSQFVVSAVGIF
SKVVLMFLNKPRVYNRERLIQLITKRPKGIPLVTVSNHYSCFDDPGLWGC
LPLGIVCNTYKIRWSMAAHDICFTNKLHSLFFMFGKCIPVVRGIGVYQDA
INLCIEKAALGHWIHVFPEGKVNMDKEELRLKWGVGRIIYESPKIPIILP
MWHEGMDDLLPNVEPYVIQRGKQVTLNVGQPLDLNDFILDLKKRQVPEPT
ARKLITDKIQEAFRDLRAETEKLHRERN*
BS11482.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:44:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taz-PA | 378 | CG8766-PA | 1..378 | 1..378 | 2027 | 100 | Plus |
Taz-PC | 338 | CG8766-PC | 2..338 | 42..378 | 1811 | 100 | Plus |
Taz-PD | 278 | CG8766-PD | 1..278 | 101..378 | 1496 | 100 | Plus |
Taz-PB | 278 | CG8766-PB | 1..278 | 101..378 | 1496 | 100 | Plus |