Clone Sequence Records
BS11489.complete Sequence
2567 bp assembled on 2009-12-07
GenBank Submission: KX803398
> BS11489.complete
GAAGTTATCAGTCGACATGTCCAAGTGGTGGAGCTGCGGCTCCAATCAGG
AGAGCAACAGCATCTTCCGCAGCGAGGTGATGTCCTTGGTGCAAATGTAT
CTGCAGCCGGAGGCAGCCTACGATACGATTGCCGCCTTGGGCGAGGTGGG
ATGTGTTCAGTTCCGTGATTTGAATGCGAAAATAAACGCTCAGCAGCGAA
AATTTATTGGCGAGGTGAGACGCTGCGATGAACTGGAGCGCCGGATCCGC
TACGTAACCGCTGAGTTGAACAAGGAGGGTCACAAGGTGCTCGATCTAAT
GGATGACTTCCCACCGGCTCCTCAGCCACGTGAGATTATTGACTTGGAGT
TGCATCTGGAGAAAACAGAGACAGAGATCTTGGAGCTGGCTGCCAACAAT
GTGAACCTCCAGACCAGCTACTTGGAGCTGAGCGAGATGATCCAAGTGCT
GGAGCGTACCGATCAATTCTTTTCGGACCAGGAGTCGCACAACTTCGATC
TGAATAAGATGGGCACCCACCGCGATCCAGAGAAGTCCAATGGCCATCTG
GGATTTGTGGCTGGCGTGATCAGCAGGGAGAGGGAGTACGCCTTCGAGCG
AATGCTGTGGCGTATTTCCCGGGGCAATGTCTTTGTTCGCCGATGCGATG
TTGATGTGGCCCTAACGGATCCCAAGACGGGCAATGTGCTGCACAAGAGC
GTCTTCGTGGTCTTCTTCCAGGGCGACCAGTTGCAGGCCAGAATCCGCAA
GGTGTGCACTGGTTTCCATGCCCACATGTATCCCTGTCCCAGCTCACACT
CCGAGCGCCAGGAGATGGTCAAGAATGTGAGGACCCGATTGGAGGACCTC
CAGGTTATCATTAACCAGACGAGTGACCACAGGACCTGCGTCCTGCAGGC
TGCCTTGAAACAGCTGCCCACCTGGAGCGCCATGGTCAAGAAAATGAAGG
GCATCTACCACACGCTGAACCTTTTCAACGTGGATCTGGGCAGCAAGTGC
CTGATTGGCGAAGGTTGGGTGCCCAAGAGGGAGCTGGAGCTGGTCGAGGT
CGCTCTGGCTGCAGGATCAGCCAGTGTGGGCAGCACTGTGCCTTCGTTCA
TCAACGTATTGGACACCAAGAAGGAGCCACCAACCCACTTCAGGACCAAT
AAGTTTACACGTGGTTTCCAAAACTTGATTGATGCCTATGGAATCGCTGG
CTACCGGGAGGTGAACCCTGGTCTGTACACCTGCATCACTTTCCCCTTCC
TGTTTGCGGTGATGTTCGGAGATATGGGCCACGGAACAATCCTCTTCCTT
CTGGGTCTGTGGATGGTGATCGACGAAAAACGGCTGTCCAAGAAGCGAGG
TGGCGAGATCTGGAACATCTTCTTTGCCGGGCGTTACATTATCATGCTGA
TGGGTCTGTTCGCTATGTACACTGGATTCCACTATAACGACATCTTTTCC
AAGTCGATTAATGTTTTTGGCACTCGCTGGGTCAATGTGTACAATCGAAC
CACTGTGCTGACCAATCCCACGCTGCAGCTGAACCCCTCGGTAGCCACAC
GCGGTGTTTACCCAATGGGCATCGATCCCATTTGGCAGTCGGCCTCGAAC
AAGATCATTTTCCTAAACACCTACAAGATGAAGCTATCGATCATCTTTGG
AGTGCTGCACATGGTCTTTGGCGTGTGCATGTCGGTGGAGAATTTTGTAT
TCTTTAAGAAATACGCCTACATCATCCTGCAGTTCGTGCCCCAGGTCCTC
TTCCTGCTTCTCATGTTCGGCTACATGTGCTTCATGATGTTCTACAAGTG
GGTCAAGTACAGTCCAACAACAGACGTGGAGGCCGACACTCCTGGATGTG
CGCCCTCAGTCCTGATTATGTTCATCGACATGGTGCTTTTCAAGACGGAG
ACGGCCCTGCCAGGCTGTGATGTCAATATGTTCCCCATTCAAAAGAATCT
GGAGATGATCTTCCTGGTGGTGGCCCTTCTTTGCATTCCGTGGATTCTGC
TTGGAAAACCTCTATACATTAAATACCAACGCCGAAACAGGCCTGCTGGA
CCAGTGGAGGAAGTGGACGAGATCGTAGAGAAGATAGAGGTGACAACTGG
CAAGGAGATCATTATCACTGAGGTAGCCGAAGCGCATGAGTCGGGAGGAC
ACAGCGAGGAGGATGACGAGCCGATGAGCGAAATCTGGATCCACCAGGCC
ATCCACACAATCGAGTATATCCTTAGTACCATCTCACACACGGCCTCATA
TCTTCGTCTCTGGGCCTTGTCCTTAGCTCATGCCCAGCTATCGGAGGTGC
TGTGGACTATGGTGCTGGCGATGGGACTTCAGATGAACGGCTACGTGGGC
GCCATTGGGCTGTTTTTCATCTTTGCCGTTTGGGAGTTTTTCACCATCGC
TATCATGGTCATGATGGAGGGTCTTTCCGCCTTCCTGCACACATTGCGCT
TGCACTGGGTGGAGTTCATGAGCAAGTTCTATGTGGGAAACGGATATCCG
TTCACGCCATTCAGCTTTAAGGATATTTTGATCGTCGTCGAAGATGATTA
GAAGCTTTCTAGACCAT
BS11489.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:09:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vha100-4-RA | 2535 | CG7678-PA | 1..2535 | 17..2551 | 12675 | 100 | Plus |
| Vha100-2-RA | 2505 | CG18617-PA | 2122..2476 | 2168..2522 | 710 | 80 | Plus |
| Vha100-2-RB | 2505 | CG18617-PB | 2122..2476 | 2168..2522 | 710 | 80 | Plus |
| Vha100-2-RA | 2505 | CG18617-PA | 1306..1852 | 1349..1895 | 650 | 74.6 | Plus |
| Vha100-2-RA | 2505 | CG18617-PA | 647..1238 | 693..1284 | 620 | 73.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:09:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vha100-4-RA | 2728 | CG7678-RA | 87..2624 | 16..2553 | 12690 | 100 | Plus |
| Vha100-2-RA | 3044 | CG18617-RA | 2359..2713 | 2168..2522 | 710 | 80 | Plus |
| Vha100-2-RB | 3006 | CG18617-RB | 2321..2675 | 2168..2522 | 710 | 80 | Plus |
| Vha100-2-RA | 3044 | CG18617-RA | 1543..2089 | 1349..1895 | 650 | 74.6 | Plus |
| Vha100-2-RA | 3044 | CG18617-RA | 884..1475 | 693..1284 | 620 | 73.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:09:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18387575..18389446 | 2041..170 | 9360 | 100 | Minus |
| 3R | 32079331 | 3R | 18386945..18387212 | 2553..2286 | 1340 | 100 | Minus |
| 3R | 32079331 | 3R | 18387269..18387513 | 2285..2041 | 1225 | 100 | Minus |
| 3R | 32079331 | 3R | 18389566..18389719 | 169..16 | 770 | 100 | Minus |
| 3R | 32079331 | 3R | 18392085..18392676 | 1284..693 | 620 | 73.6 | Minus |
| 3R | 32079331 | 3R | 18391576..18392017 | 1790..1349 | 560 | 75.1 | Minus |
| 2L | 23513712 | 2L | 11743087..11743323 | 1568..1804 | 420 | 78.5 | Plus |
| 3R | 32079331 | 3R | 18390654..18390890 | 2522..2286 | 405 | 78.1 | Minus |
| 3R | 32079331 | 3R | 18390962..18391079 | 2285..2168 | 305 | 83.9 | Minus |
| 2L | 23513712 | 2L | 11743617..11743724 | 2173..2280 | 240 | 81.5 | Plus |
| 3R | 32079331 | 3R | 29135757..29135867 | 1175..1285 | 225 | 80.2 | Plus |
| 2L | 23513712 | 2L | 11742211..11742366 | 695..850 | 225 | 76.3 | Plus |
| 2R | 25286936 | 2R | 18910295..18910415 | 1286..1166 | 200 | 77.7 | Minus |
| 2L | 23513712 | 2L | 11742661..11742801 | 1145..1285 | 195 | 75.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:09:28 has no hits.
BS11489.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:46:17 Download gff for
BS11489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7678-RA | 86..2620 | 17..2551 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:23 Download gff for
BS11489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vha100-4-RA | 86..2620 | 17..2551 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:12:34 Download gff for
BS11489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7678-RA | 86..2620 | 17..2551 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:12 Download gff for
BS11489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vha100-4-RA | 88..2622 | 17..2551 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:12 Download gff for
BS11489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18386947..18387212 | 2286..2551 | 100 | <- | Minus |
| 3R | 18387269..18387512 | 2042..2285 | 100 | <- | Minus |
| 3R | 18387575..18389446 | 170..2041 | 100 | <- | Minus |
| 3R | 18389566..18389718 | 17..169 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:23 Download gff for
BS11489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14212669..14212934 | 2286..2551 | 100 | <- | Minus |
| arm_3R | 14212991..14213234 | 2042..2285 | 100 | <- | Minus |
| arm_3R | 14213297..14215168 | 170..2041 | 100 | <- | Minus |
| arm_3R | 14215288..14215440 | 17..169 | 100 | | Minus |
BS11489.3prime Sequence
919 bp (797 high quality bases) assembled on 2006-05-08
> BS11489.3prime
ATGGTCTAGAAAGCTTCTAATCATCTTCGACGACGATCAAAATATCCTTA
AAGCTGAATGGCGTGAACGGATATCCGTTTCCCACATAGAACTTGCTCAT
GAACTCCACCCAGTGCAAGCGCAATGTGTGCAGGAAGGCGGAAAGACCCT
CCATCATGACCATGATAGCGATGGTGAAAAACTCCCAAACGGCAAAGATG
AAAAACAGCCCAATGGCGCCCACGTAGCCGTTCATCTGAAGTCCCATCGC
CAGCACCATAGTCCACAGCACCTCCGATAGCTGGGCATGAGCTAAGGACA
AGGCCCAGAGACGAAGATATGAGGCCGTGTGTGAGATGGTACTAAGGATA
TACTCGATTGTGTGGATGGCCTGGTGGATCCAGATTTCGCTCATCGGCTC
GTCATCCTCCTCGCTGTGTCCTCCCGACTCATGCGCTTCGGCTACCTCAG
TGATAATGATCTCCTTGCCAGTTGTCACCTCTATCTTCTCTACGATCTCG
TCCACTTCCTCCACTGGTCCAGCAGGCCTGTTTCGGCGTTGGTATTTAAT
GTATAGAGGTTTTCCAAGCAGAATCCACGGAATGCAAAGAAGGGCCACCA
CCAGGAAGATCATCTCCAGATTCTTTTGAATGGGGAACATATTGACATCA
CAGCCTGGCAGGGCCGTCTCCGTCTTGAAAAGCACCATGTCGATGAACAT
AATCAGGACTGAGGGCGCACATCCAGGAGTGTCGGCCTCCACGTCTGTTG
TTGGACTGTACTTGACCCACTTGTAGAACATCATGAAGCACATGTAGCCG
AACATGAGAAGCAGGAAGAGGACCTGGGGCACGAACTGCAGGATGATGTA
GGCGTATTTCTTAAAGAATACAAAATTCTCCACCGACATGCACACGCCAA
AGACCATGTGCAGCACTCC
BS11489.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:10:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7678-PA | 2535 | CG7678-RA | 1633..2535 | 919..17 | 4515 | 100 | Minus |
| CG18617-PB | 2505 | Vha100-2-RB | 2122..2259 | 400..263 | 165 | 84.7 | Minus |
| CG18617-PB | 2505 | Vha100-2-RB | 1606..1643 | 919..882 | 165 | 97.3 | Minus |
| CG18617-PA | 2505 | Vha100-2-RA | 1606..1643 | 919..882 | 165 | 97.3 | Minus |
| CG18617-PA | 2505 | Vha100-2-RA | 2122..2259 | 400..263 | 165 | 84.7 | Minus |
| CG12602-PA | 2445 | CG12602-RA | 2323..2375 | 139..87 | 165 | 92.4 | Minus |
| CG18617-PB | 2505 | Vha100-2-RB | 2405..2435 | 117..87 | 155 | 100 | Minus |
| CG18617-PA | 2505 | Vha100-2-RA | 2405..2435 | 117..87 | 155 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:48:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vha100-4-RA | 2728 | CG7678-RA | 1720..2624 | 919..15 | 4525 | 100 | Minus |
| Vha100-2-RA | 3044 | CG18617-RA | 2359..2713 | 400..46 | 710 | 80 | Minus |
| Vha100-2-RB | 3006 | CG18617-RB | 2321..2675 | 400..46 | 710 | 80 | Minus |
| Vha100-2-RA | 3044 | CG18617-RA | 1843..2089 | 919..673 | 335 | 76.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:48:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18387575..18387967 | 527..919 | 1965 | 100 | Plus |
| 3R | 32079331 | 3R | 18386945..18387212 | 15..282 | 1340 | 100 | Plus |
| 3R | 32079331 | 3R | 18387269..18387513 | 283..527 | 1225 | 100 | Plus |
| 3R | 32079331 | 3R | 18390654..18390890 | 46..282 | 405 | 78.1 | Plus |
| 3R | 32079331 | 3R | 18390962..18391079 | 283..400 | 305 | 83.9 | Plus |
| 2L | 23513712 | 2L | 11743177..11743323 | 910..764 | 240 | 77.6 | Minus |
| 2L | 23513712 | 2L | 11743617..11743724 | 395..288 | 240 | 81.5 | Minus |
Blast to na_te.dros performed on 2015-02-12 03:48:25 has no hits.
BS11489.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:10:51 Download gff for
BS11489.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7678-PA | 1633..2535 | 17..919 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:42:01 Download gff for
BS11489.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7678-PA | 1633..2535 | 17..919 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:52:45 Download gff for
BS11489.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vha100-4-RA | 1718..2629 | 6..919 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:52:37 Download gff for
BS11489.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vha100-4-RA | 1720..2631 | 6..919 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:52:37 Download gff for
BS11489.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18386938..18387212 | 6..282 | 98 | <- | Plus |
| 3R | 18387269..18387512 | 283..526 | 100 | <- | Plus |
| 3R | 18387575..18387967 | 527..919 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:52:45 Download gff for
BS11489.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14212660..14212934 | 6..282 | 98 | <- | Plus |
| arm_3R | 14212991..14213234 | 283..526 | 100 | <- | Plus |
| arm_3R | 14213297..14213689 | 527..919 | 100 | | Plus |
BS11489.5prime Sequence
976 bp (846 high quality bases) assembled on 2006-05-08
> BS11489.5prime
GAAGTTATCAGTCGACATGTCCAAGTGGTGGAGCTGCGGCTCCAATCAGG
AGAGCAACAGCATCTTCCGCAGCGAGGTGATGTCCTTGGTGCAAATGTAT
CTGCAGCCGGAGGCAGCCTACGATACGATTGCCGCCTTGGGCGAGGTGGG
ATGTGTTCAGTTCCGTGATTTGAATGCGAAAATAAACGCTCAGCAGCGAA
AATTTATTGGCGAGGTGAGACGCTGCGATGAACTGGAGCGCCGGATCCGC
TACGTAACCGCTGAGTTGAACAAGGAGGGTCACAAGGTGCTCGATCTAAT
GGATGACTTCCCACCGGCTCCTCAGCCACGTGAGATTATTGACTTGGAGT
TGCATCTGGAGAAAACAGAGACAGAGATCTTGGAGCTGGCTGCCAACAAT
GTGAACCTCCAGACCAGCTACTTGGAGCTGAGCGAGATGATCCAAGTGCT
GGAGCGTACCGATCAATTCTTTTCGGACCAGGAGTCGCACAACTTCGATC
TGAATAAGATGGGCACCCACCGCGATCCAGAGAAGTCCAATGGCCATCTG
GGATTTGTGGCTGGCGTGATCAGCAGGGAGAGGGAGTACGCCTTCGAGCG
AATGCTGTGGCGTATTTCCCGGGGCAATGTCTTTGTTCGCCGATGCGATG
TTGATGTGGCCCTAACGGATCCCAAGACGGGCAATGTGCTGCACAAGAGC
GTCTTCGTGGTCTTCTTCCAGGGCGACCAGTTGCAGGCCAGAATCCGCAA
GGTGTGCACTGGTTTCCATGCCCACATGTATCCCTGTCCCAGCTCACACT
CCGAGCGCCAGGAGATGGTCAAGAATGTGAGGACCCCGATGGAGGACCTC
CCAGTTATCATTACCAGACGAGTGACCACAGGACCTGCGTCCTGCAGGCT
GCCTTTGAACAGCTGCCCACCTGGAGCGGCATGGTCAAGAAATGAAGGGC
ATCTACCACACCCTGAACTTTTTCAA
BS11489.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:10:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7678-PA | 2535 | CG7678-RA | 1..820 | 17..836 | 4100 | 100 | Plus |
| CG7678-PA | 2535 | CG7678-RA | 848..927 | 863..942 | 325 | 96.2 | Plus |
| CG7678-PA | 2535 | CG7678-RA | 926..962 | 940..976 | 135 | 94.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 03:14:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vha100-4-RA | 2728 | CG7678-RA | 87..1049 | 16..976 | 4615 | 98.9 | Plus |
| Vha100-2-RA | 3044 | CG18617-RA | 884..1010 | 693..819 | 275 | 82 | Plus |
| Vha100-2-RB | 3006 | CG18617-RB | 846..972 | 693..819 | 275 | 82 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 03:14:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18388638..18389446 | 976..170 | 3795 | 98.5 | Minus |
| 3R | 32079331 | 3R | 18389566..18389719 | 169..16 | 770 | 100 | Minus |
| 3R | 32079331 | 3R | 18392550..18392676 | 819..693 | 275 | 81.1 | Minus |
| 2L | 23513712 | 2L | 11742211..11742346 | 695..830 | 215 | 77.2 | Plus |
Blast to na_te.dros performed on 2015-02-04 03:14:28 has no hits.
BS11489.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:10:52 Download gff for
BS11489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7678-PA | 1..960 | 17..974 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:42:03 Download gff for
BS11489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7678-PA | 1..960 | 17..974 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:51:45 Download gff for
BS11489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vha100-4-RA | 73..1045 | 3..974 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:27:45 Download gff for
BS11489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vha100-4-RA | 75..1047 | 3..974 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:27:45 Download gff for
BS11489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18388640..18389446 | 170..974 | 98 | <- | Minus |
| 3R | 18389566..18389731 | 3..169 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:51:45 Download gff for
BS11489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14214362..14215168 | 170..974 | 98 | <- | Minus |
| arm_3R | 14215288..14215453 | 3..169 | 97 | | Minus |
BS11489.pep Sequence
Translation from 16 to 2550
> BS11489.pep
MSKWWSCGSNQESNSIFRSEVMSLVQMYLQPEAAYDTIAALGEVGCVQFR
DLNAKINAQQRKFIGEVRRCDELERRIRYVTAELNKEGHKVLDLMDDFPP
APQPREIIDLELHLEKTETEILELAANNVNLQTSYLELSEMIQVLERTDQ
FFSDQESHNFDLNKMGTHRDPEKSNGHLGFVAGVISREREYAFERMLWRI
SRGNVFVRRCDVDVALTDPKTGNVLHKSVFVVFFQGDQLQARIRKVCTGF
HAHMYPCPSSHSERQEMVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQL
PTWSAMVKKMKGIYHTLNLFNVDLGSKCLIGEGWVPKRELELVEVALAAG
SASVGSTVPSFINVLDTKKEPPTHFRTNKFTRGFQNLIDAYGIAGYREVN
PGLYTCITFPFLFAVMFGDMGHGTILFLLGLWMVIDEKRLSKKRGGEIWN
IFFAGRYIIMLMGLFAMYTGFHYNDIFSKSINVFGTRWVNVYNRTTVLTN
PTLQLNPSVATRGVYPMGIDPIWQSASNKIIFLNTYKMKLSIIFGVLHMV
FGVCMSVENFVFFKKYAYIILQFVPQVLFLLLMFGYMCFMMFYKWVKYSP
TTDVEADTPGCAPSVLIMFIDMVLFKTETALPGCDVNMFPIQKNLEMIFL
VVALLCIPWILLGKPLYIKYQRRNRPAGPVEEVDEIVEKIEVTTGKEIII
TEVAEAHESGGHSEEDDEPMSEIWIHQAIHTIEYILSTISHTASYLRLWA
LSLAHAQLSEVLWTMVLAMGLQMNGYVGAIGLFFIFAVWEFFTIAIMVMM
EGLSAFLHTLRLHWVEFMSKFYVGNGYPFTPFSFKDILIVVEDD*
BS11489.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:09:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vha100-4-PA | 844 | CG7678-PA | 1..844 | 1..844 | 4437 | 100 | Plus |
| Vha100-2-PA | 834 | CG18617-PA | 4..834 | 16..844 | 2903 | 65.8 | Plus |
| Vha100-2-PB | 834 | CG18617-PB | 4..834 | 16..844 | 2903 | 65.8 | Plus |
| Vha100-5-PB | 814 | CG12602-PB | 4..814 | 16..844 | 2481 | 56.4 | Plus |
| Vha100-5-PA | 814 | CG12602-PA | 4..814 | 16..844 | 2481 | 56.4 | Plus |
