Clone BS11507 Report

Search the DGRC for BS11507

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:115
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG16749-RA
Protein status:BS11507.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS11507.3prime Sequence

828 bp (827 high quality bases) assembled on 2006-05-08

> BS11507.3prime
ATGGTCTAGAAAGCTTCTAGGCCAAGATGATCTGGCTCTTCTTGATCCAG
TCAACATACTGGCTGACCTTGCAGTAAACACCCGGATAGGGTGCCACGGT
GCAGGGCTTGATGCTCCACGACACGATGCCCACCTGCTGGCCATTGTAGA
TGAGGGGTCCACCCGAATCTCCGCTGCACTGTCCCTTGCCACCCTCGTCC
ACCCCTCCGCAGATGTGGTACCTGGGATCGGTGCGACCGCCATGGCGTTC
GGTGCACTCCTCGTCTGAGTAGACCTTCAATTCCACCTCCTGCAGTGTGG
ATTGGATGTATCCGCCAGTCGCATTGAGTCCCCATCCGATGAGCACCCCC
TCGCCACCGGCATCCGTTTGAGGTGTGGCAAAGGCGAGCTCCGGCAACTT
TACGGGTGCAACCGTGACGCCATCAAACTCGAATGGCTCCTCCACGAGCA
GCAGTGAAATATCGTTGGCATAGTTGTTGTAGGGATTATAATCCTCGTGC
TGGATGATCTTCTTCACGCGCACCACATTCGGACCGGTGGCATTAATCTT
AGTCACTCCATACTGAACAGACAAATCCGATGCCTTGCGTCCATCCGTAC
AATGAGCAGCAGTCATTACAAACTGCTTGGAAATAATGGAGCCACCGCAG
GAATGCGAGCCACTGGATCCACGCATCGAAATCACGAAGGGGTATTTCTC
CACGCTGGAATCCGTGCCATTGACCACACGACCCATTTGGGGAGCTCCAT
GGGAAATGCCCGCGGTGGTCAAGAGGGCGAATACCGCCAGGCAGAGATCC
TGATTCCGCGACATGTCGACTGATAACT

BS11507.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:10:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-PA 798 CG16749-RA 1..798 814..17 3965 99.8 Minus
CG12951-PA 798 CG12951-RA 628..773 187..42 505 93.8 Minus
CG12951-PA 798 CG12951-RA 153..215 662..600 140 88.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-RA 873 CG16749-RA 7..804 814..17 3975 99.9 Minus
CG12951-RA 857 CG12951-RA 94..804 727..17 1065 77.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9331320..9331683 320..683 1805 99.7 Plus
3R 32079331 3R 9330954..9331257 17..320 1520 100 Plus
3R 32079331 3R 9329276..9329488 17..229 675 87.8 Plus
3R 32079331 3R 9331748..9331879 683..814 660 100 Plus
3R 32079331 3R 9329643..9329983 322..662 430 75.1 Plus
Blast to na_te.dros performed on 2015-02-11 10:25:07 has no hits.

BS11507.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:11:17 Download gff for BS11507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-PA 1..798 17..814 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:42:42 Download gff for BS11507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-PA 1..798 17..814 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 05:04:24 Download gff for BS11507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 1..804 17..817 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:26:49 Download gff for BS11507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 1..804 17..817 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:26:49 Download gff for BS11507.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 9330954..9331256 17..319 100 <- Plus
3R 9331320..9331682 320..682 99 <- Plus
3R 9331748..9331879 683..814 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 05:04:24 Download gff for BS11507.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5156676..5156978 17..319 100 <- Plus
arm_3R 5157042..5157404 320..682 99 <- Plus
arm_3R 5157470..5157601 683..814 100   Plus

BS11507.5prime Sequence

820 bp (735 high quality bases) assembled on 2006-05-08

> BS11507.5prime
GAAGTTATCAGTCGACATGTCGCGGAATCAGGATCTCTGCCTGGCGGTAT
TCGCCCTCTTGACCACCGCGGGCATTTCCCATGGAGCTCCCCAAATGGGT
CGTGTGGTCAATGGCACGGATTCCAGCGTGGAGAAATACCCCTTCGTGAT
TTCGATGCGTGGATCCAGTGGCTCGCATTCCTGCGGTGGCTCCATTATTT
CCAAGCAGTTTGTAATGACTGCTGCTCATTGTACGGATGGACGCAAGGCA
TCGGATTTGTCTGTTCAGTATGGAGTGACTAAGATTAATGCCACCGGTCC
GAATGTGGTGCGCGTGAAGAAGATCATCCAGCACGAGGATTATAATCCCT
ACAACAACTATGCCAACGATATTTCACTGCTGCTCGTGGAGGAGCCATTC
GAGTTTGATGGCGTCACGGTTGCACCCGTAAAGTTGCCGGAGCTCGCCTT
TGCCACACCTCAAACGGATGCCGGTGGCGAGGGGGTGCTCATCGGATGGG
GACTCAATGCGACTGGCGGATACATCCAATCCACACTGCAGGAGGTGGAA
TTGAAGGTCTACTCAGACGAGGAGTGCACCGAACGCCATGGCGGTCGCAC
CGATCCCAGGTACCACATCTGCGGAGGGGTGGACGAGGGTGGCAAGGGAC
AGTGCAGCGGAGATTCGGGTGGACCCCTCATCTACAATGGCCAGCANGTG
GGCATCGTGTCGTGGAGCATCAAGCCCTGCACCGTGGCACCCTATCCGGG
TGTTTACTGCAAGGTCAGCCAGTATGTTGACTGGATCAAGAAGAGCCAGA
TCATCTTGGGCTAGAAGCTT

BS11507.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:10:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-PA 798 CG16749-RA 1..793 17..809 3921 99.7 Plus
CG12951-PA 798 CG12951-RA 628..773 644..789 511 93.8 Plus
CG12951-PA 798 CG12951-RA 153..215 169..231 140 88.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:59:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-RA 873 CG16749-RA 7..804 17..814 3949 99.6 Plus
CG12951-RA 857 CG12951-RA 94..779 104..789 1064 77.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:59:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9331320..9331683 511..148 1805 99.7 Minus
3R 32079331 3R 9330954..9331257 814..511 1494 99.3 Minus
3R 32079331 3R 9329301..9329488 789..602 674 90.4 Minus
3R 32079331 3R 9331748..9331879 148..17 660 100 Minus
3R 32079331 3R 9329643..9329983 509..169 430 75.1 Minus
Blast to na_te.dros performed on 2015-02-11 12:59:35 has no hits.

BS11507.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:11:19 Download gff for BS11507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-PA 1..798 17..814 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:42:43 Download gff for BS11507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-PA 1..798 17..814 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:20:03 Download gff for BS11507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 1..808 14..820 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:11:59 Download gff for BS11507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 1..808 14..820 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:11:59 Download gff for BS11507.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 9330950..9331256 512..820 98 <- Minus
3R 9331320..9331682 149..511 99 <- Minus
3R 9331748..9331879 17..148 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:20:03 Download gff for BS11507.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5156672..5156978 512..820 98 <- Minus
arm_3R 5157042..5157404 149..511 99 <- Minus
arm_3R 5157470..5157601 17..148 100   Minus

BS11507.complete Sequence

830 bp assembled on 2006-11-01

> BS11507.complete
GAAGTTATCAGTCGACATGTCGCGGAATCAGGATCTCTGCCTGGCGGTAT
TCGCCCTCTTGACCACCGCGGGCATTTCCCATGGAGCTCCCCAAATGGGT
CGTGTGGTCAATGGCACGGATTCCAGCGTGGAGAAATACCCCTTCGTGAT
TTCGATGCGTGGATCCAGTGGCTCGCATTCCTGCGGTGGCTCCATTATTT
CCAAGCAGTTTGTAATGACTGCTGCTCATTGTACGGATGGACGCAAGGCA
TCGGATTTGTCTGTTCAGTATGGAGTGACTAAGATTAATGCCACCGGTCC
GAATGTGGTGCGCGTGAAGAAGATCATCCAGCACGAGGATTATAATCCCT
ACAACAACTATGCCAACGATATTTCACTGCTGCTCGTGGAGGAGCCATTC
GAGTTTGATGGCGTCACGGTTGCACCCGTAAAGTTGCCGGAGCTCGCCTT
TGCCACACCTCAAACGGATGCCGGTGGCGAGGGGGTGCTCATCGGATGGG
GACTCAATGCGACTGGCGGATACATCCAATCCACACTGCAGGAGGTGGAA
TTGAAGGTCTACTCAGACGAGGAGTGCACCGAACGCCATGGCGGTCGCAC
CGATCCCAGGTACCACATCTGCGGAGGGGTGGACGAGGGTGGCAAGGGAC
AGTGCAGCGGAGATTCGGGTGGACCCCTCATCTACAATGGCCAGCAGGTG
GGCATCGTGTCGTGGAGCATCAAGCCCTGCACCGTGGCACCCTATCCGGG
TGTTTACTGCAAGGTCAGCCAGTATGTTGACTGGATCAAGAAGAGCCAGA
TCATCTTGGCCTAGAAGCTTTCTAGACCAT

BS11507.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:59:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-RA 798 CG16749-PA 1..798 17..814 3975 99.9 Plus
CG12951-RA 798 CG12951-PA 88..798 104..814 1050 76.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:59:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-RA 873 CG16749-RA 7..804 17..814 3975 99.9 Plus
CG12951-RA 857 CG12951-RA 94..804 104..814 1050 76.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:59:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9331320..9331683 511..148 1805 99.7 Minus
3R 32079331 3R 9330954..9331257 814..511 1520 100 Minus
3R 32079331 3R 9329276..9329488 814..602 675 87.8 Minus
3R 32079331 3R 9331748..9331879 148..17 660 100 Minus
3R 32079331 3R 9329643..9329983 509..169 430 75.1 Minus
Blast to na_te.dros performed on 2014-11-27 14:59:50 has no hits.

BS11507.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:50:17 Download gff for BS11507.complete
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 1..798 17..814 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:25:20 Download gff for BS11507.complete
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 17..814 17..814 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:35:45 Download gff for BS11507.complete
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 7..804 17..814 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:50:17 Download gff for BS11507.complete
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 17..814 17..814 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:57:35 Download gff for BS11507.complete
Subject Subject Range Query Range Percent Splice Strand
CG16749-RA 7..804 17..814 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:57:35 Download gff for BS11507.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9331748..9331879 17..148 100   Minus
3R 9330954..9331256 512..814 100 <- Minus
3R 9331320..9331682 149..511 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:35:45 Download gff for BS11507.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5156676..5156978 512..814 100 <- Minus
arm_3R 5157042..5157404 149..511 99 <- Minus
arm_3R 5157470..5157601 17..148 100   Minus

BS11507.pep Sequence

Translation from 16 to 813

> BS11507.pep
MSRNQDLCLAVFALLTTAGISHGAPQMGRVVNGTDSSVEKYPFVISMRGS
SGSHSCGGSIISKQFVMTAAHCTDGRKASDLSVQYGVTKINATGPNVVRV
KKIIQHEDYNPYNNYANDISLLLVEEPFEFDGVTVAPVKLPELAFATPQT
DAGGEGVLIGWGLNATGGYIQSTLQEVELKVYSDEECTERHGGRTDPRYH
ICGGVDEGGKGQCSGDSGGPLIYNGQQVGIVSWSIKPCTVAPYPGVYCKV
SQYVDWIKKSQIILA*

BS11507.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:06:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG16749-PA 265 CG16749-PA 1..265 1..265 1408 100 Plus
CG12951-PA 265 CG12951-PA 1..265 1..265 1088 75.8 Plus
CG32808-PA 284 CG32808-PA 7..255 9..257 560 47.2 Plus
etaTry-PA 262 CG12386-PA 9..258 9..261 385 36 Plus
CG31954-PA 277 CG31954-PA 49..273 28..259 382 40.5 Plus