Clone Sequence Records
BS11513.3prime Sequence
360 bp (359 high quality bases) assembled on 2006-05-08
> BS11513.3prime
ATGGTCTAGAAAGCTTTTATTCCGGGGGCGTATATCCAGGATTTAAGGCA
CGACCACGGTGATTGAAGGAATAGAACGAGGGGAAGTTGCCCAAGGTGTC
CCAAGTTTTCTGTTGCATGTCCACGGTGGCGCGAATTTCCTTGAAGTTGC
CAACGATCTCGATGATGTTGTAAATCACAATCACCAAACTGATGACGGTC
TGCAGGATAATGTCCAATGGAAGGCTATTCCATTCCTGCTCCGTCAGCCT
CAAATAGGTGCGATGATGGGCAGCAGAAAAAGCAGCATGTGCCAGGCTGG
CAAATCCGGCAATTAGCAAGAGTTTGTTAAACAGTTTACTGCCCATGTCG
ACTGATAACT
BS11513.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:10:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15168-PA | 330 | CG15168-RA | 1..330 | 346..17 | 1650 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:07:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15168-RA | 492 | CG15168-RA | 83..412 | 346..17 | 1650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 01:07:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18988057..18988251 | 211..17 | 975 | 100 | Minus |
2L | 23513712 | 2L | 18987789..18987870 | 346..265 | 410 | 100 | Minus |
2L | 23513712 | 2L | 18987936..18987988 | 264..212 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 01:07:16 has no hits.
BS11513.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:11:30 Download gff for
BS11513.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-PA | 1..330 | 17..346 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:42:59 Download gff for
BS11513.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-PA | 1..330 | 17..346 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 15:10:31 Download gff for
BS11513.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-RA | 74..423 | 8..355 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:27:29 Download gff for
BS11513.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-RA | 74..423 | 8..355 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 04:27:29 Download gff for
BS11513.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18987780..18987870 | 265..355 | 95 | -> | Minus |
2L | 18987936..18987988 | 212..264 | 100 | -> | Minus |
2L | 18988057..18988262 | 8..211 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 15:10:31 Download gff for
BS11513.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18987780..18987870 | 265..355 | 95 | -> | Minus |
arm_2L | 18987936..18987988 | 212..264 | 100 | -> | Minus |
arm_2L | 18988057..18988262 | 8..211 | 98 | | Minus |
BS11513.5prime Sequence
360 bp (359 high quality bases) assembled on 2006-05-08
> BS11513.5prime
GAAGTTATCAGTCGACATGGGCAGTAAACTGTTTAACAAACTCTTGCTAA
TTGCCGGATTTGCCAGCCTGGCACATGCTGCTTTTTCTGCTGCCCATCAT
CGCACCTATTTGAGGCTGACGGAGCAGGAATGGAATAGCCTTCCATTGGA
CATTATCCTGCAGACCGTCATCAGTTTGGTGATTGTGATTTACAACATCA
TCGAGATCGTTGGCAACTTCAAGGAAATTCGCGCCACCGTGGACATGCAA
CAGAAAACTTGGGACACCTTGGGCAACTTCCCCTCGTTCTATTCCTTCAA
TCACCGTGGTCGTGCCTTAAATCCTGGATATACGCCCCCGGAATAAAAGC
TTTCTAGACC
BS11513.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:10:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15168-PA | 330 | CG15168-RA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:05:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15168-RA | 492 | CG15168-RA | 83..412 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:05:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18988057..18988251 | 152..346 | 975 | 100 | Plus |
2L | 23513712 | 2L | 18987789..18987870 | 17..98 | 410 | 100 | Plus |
2L | 23513712 | 2L | 18987936..18987988 | 99..151 | 265 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:05:14 has no hits.
BS11513.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:11:31 Download gff for
BS11513.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-PA | 1..330 | 17..346 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:43:00 Download gff for
BS11513.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-PA | 1..330 | 17..346 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 01:51:38 Download gff for
BS11513.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-RA | 74..423 | 8..355 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:03:20 Download gff for
BS11513.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-RA | 74..423 | 8..355 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:03:20 Download gff for
BS11513.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18987780..18987870 | 8..98 | 95 | -> | Plus |
2L | 18987936..18987988 | 99..151 | 100 | -> | Plus |
2L | 18988057..18988262 | 152..355 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 01:51:38 Download gff for
BS11513.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18987780..18987870 | 8..98 | 95 | -> | Plus |
arm_2L | 18987936..18987988 | 99..151 | 100 | -> | Plus |
arm_2L | 18988057..18988262 | 152..355 | 98 | | Plus |
BS11513.complete Sequence
362 bp assembled on 2006-11-01
GenBank Submission: FJ636893
> BS11513.complete
GAAGTTATCAGTCGACATGGGCAGTAAACTGTTTAACAAACTCTTGCTAA
TTGCCGGATTTGCCAGCCTGGCACATGCTGCTTTTTCTGCTGCCCATCAT
CGCACCTATTTGAGGCTGACGGAGCAGGAATGGAATAGCCTTCCATTGGA
CATTATCCTGCAGACCGTCATCAGTTTGGTGATTGTGATTTACAACATCA
TCGAGATCGTTGGCAACTTCAAGGAAATTCGCGCCACCGTGGACATGCAA
CAGAAAACTTGGGACACCTTGGGCAACTTCCCCTCGTTCTATTCCTTCAA
TCACCGTGGTCGTGCCTTAAATCCTGGATATACGCCCCCGGAATAAAAGC
TTTCTAGACCAT
BS11513.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:50:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15168-RA | 330 | CG15168-PA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:50:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15168-RA | 492 | CG15168-RA | 83..412 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:50:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18988057..18988251 | 152..346 | 975 | 100 | Plus |
2L | 23513712 | 2L | 18987789..18987870 | 17..98 | 410 | 100 | Plus |
2L | 23513712 | 2L | 18987936..18987988 | 99..151 | 265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:50:06 has no hits.
BS11513.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:50:19 Download gff for
BS11513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-RA | 1..330 | 17..346 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:25:23 Download gff for
BS11513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-RA | 54..403 | 8..355 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:26:54 Download gff for
BS11513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-RA | 83..410 | 17..344 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:50:19 Download gff for
BS11513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-RA | 54..403 | 8..355 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:05:38 Download gff for
BS11513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15168-RA | 83..410 | 17..344 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:05:38 Download gff for
BS11513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18987789..18987870 | 17..98 | 100 | -> | Plus |
2L | 18987936..18987988 | 99..151 | 100 | -> | Plus |
2L | 18988057..18988249 | 152..344 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:26:54 Download gff for
BS11513.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18987789..18987870 | 17..98 | 100 | -> | Plus |
arm_2L | 18987936..18987988 | 99..151 | 100 | -> | Plus |
arm_2L | 18988057..18988249 | 152..344 | 100 | | Plus |
BS11513.pep Sequence
Translation from 16 to 345
> BS11513.pep
MGSKLFNKLLLIAGFASLAHAAFSAAHHRTYLRLTEQEWNSLPLDIILQT
VISLVIVIYNIIEIVGNFKEIRATVDMQQKTWDTLGNFPSFYSFNHRGRA
LNPGYTPPE*
BS11513.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:44:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15168-PA | 109 | CG15168-PA | 1..109 | 1..109 | 566 | 100 | Plus |