Clone BS11581 Report

Search the DGRC for BS11581

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:115
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptCG33970-RA
Protein status:BS11581.pep: full length peptide match
Sequenced Size:2366

Clone Sequence Records

BS11581.3prime Sequence

862 bp (806 high quality bases) assembled on 2006-05-08

> BS11581.3prime
ATGGTCTAGAAAGCTTTTATCCCTTCTTGAACTTGAGCAGCAGGATGGTA
AGTACGAGGAATACCAGAACCCAGGAAGAAATGGAAATAAACCCATTGTA
GACGACGGGATTGTCGATGCCCCAGCCGCGTTGCAGTATGGATCGCATTG
ATTCCGTTGGTTTGGTGAGCGGCAGGAAGGCTGTGAAGAACTGCAGAAGC
GGGAACATGCCCTCGATCGGCCAGATAATGCCGCACAACATAACGATGGG
CAAGAACGAGCCCATCGCCACATAAGTCGCAGTTCGCTCCGTGTCCACAG
CACAGGAAATAACGAATCCGAAGCTCATGCCACACAGTCCATTCAGGATG
CAGAGTGCCACCACCAGCCATATGTTACCCACCAAGGTAAGTTCGAAGAA
GTAGAAGCTGACAATCAGTACGAAGGTCGTCTGGCTTAGCATCACCGTGA
ACTGGGTGACCACCTGGGAGAGAAGAATCTCCGGACCCGTGATTCCAGCT
ACCAAACAACGCTCCAACATGCCCTCATTCCGATCAATTAACATAGCTCC
GGAGGTAACAGCCACGGCCAAAAAGAAGATGATCGTCAGGATAACTCCGG
GAGCAGCAAAGTCTGTGAAATTGGGATTGCGATAGCCATAAACAGGATGC
TGGAAGTCCACGGGCACACGACCTAGTTTCGGATTCACATCACAGTCGCT
TAGCATGTCACCCACAAAGTTGAAGAATGTGTACTGGAGATCGCGGTACA
GCAACTGTGAGATTTGTTGATTTGACCAGTCCATTCGTACTGCTAGGTCC
GAGGACTCAATAGTTCCATCTTCGGCATACCGACCATCCCTCACGCGTTC
CATCAGAGATGC

BS11581.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:11:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG33970-PA 2334 CG33970-RA 1489..2334 862..17 4180 99.7 Minus
CG33970-PB 1557 CG33970-RB 712..1557 862..17 4180 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:20:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG33970-RC 3989 CG33970-RC 2120..2965 862..17 4200 99.8 Minus
CG33970-RB 2072 CG33970-RB 805..1650 862..17 4200 99.8 Minus
CG33970-RA 3387 CG33970-RA 2120..2965 862..17 4200 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:20:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26360810..26361564 771..17 3775 100 Minus
3R 32079331 3R 26360651..26360741 862..772 425 97.8 Minus
Blast to na_te.dros performed on 2015-02-10 21:20:49 has no hits.

BS11581.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:13:37 Download gff for BS11581.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33970-PA 1489..2334 17..862 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:46:02 Download gff for BS11581.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33970-PB 712..1557 17..862 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:11:30 Download gff for BS11581.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33970-RA 2120..2973 8..862 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:37:06 Download gff for BS11581.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33970-RA 2120..2973 8..862 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:37:06 Download gff for BS11581.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 26360651..26360741 772..862 97 -> Minus
3R 26360810..26361572 8..771 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:11:30 Download gff for BS11581.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22186373..22186463 772..862 97 -> Minus
arm_3R 22186532..22187294 8..771 99   Minus

BS11581.5prime Sequence

890 bp (801 high quality bases) assembled on 2006-05-08

> BS11581.5prime
GAAGTTATCAGTCGACATGGACGCCGCTGCCGACGGAGTACCGCCAACGG
CGCCAGCTGCGACGGCGACGACGGCCAACAGTGATCTGGACTTGGCGGCA
CGTCGGCGTCTCTTCATCTCACAGCCCTCGACGCTGGCGACGCGCCGCCA
GCAGGCGGTTTGTGTGCGGCGGGCCCACAAAATGTATGGCAGCAGCAAGA
ACCCCAACGTTGTCCTCGACGGCCTGAACATGACAGTGCCCAAGGGTTCC
ATATATGGTCTCTTGGGCGCATCTGGATGCGGGAAAACAACGCTGCTCAG
CTGCATCGTCGGACGACGTCGCCTTAATTCTGGCGAGATTTGGGTACTCG
GCGGGCGACCCGGATCTCGGGGTTCCGGAGTGCCTGGACCCCGGATTGGC
TATATGCCACAGGAGATAGCCCTTTACGGCGAGTTCACGATGCGTGAGAC
CTTAATCTACTTCGGCATCATTTCTGCCATGTCCAAAGGCGACATCGAGG
ATCGTACAGAATTCCTTCTCAAATTACTTAATTTGCCAAATGCCTCCAAA
TTTGTCAAGAATCTGAGTGGCGGCCAGCAGCGGCGAGTGAGTCTGGCGGT
GGCTCTGCTCCATGAGCCGGAGCTACTCATCCTGGATGAGCCCACAGTGG
GGGTGGACCCCGTTTTGCGTCAGAGCATCTGGGATCATTTGGTGGACATT
ACGAAAAATGGTCACACGACTGTGATAATCACCACGCATTACATCGACGA
GTGTGCCCAGGCGCATATGATCGGTCTACTGCGTGGTGGAAAAATGCTGG
CAGAGGAATCGCCGGACTATCTGCGTCAGCAGTATAATGCCGACTCGCTG
GAGGATGTCTTCCTGAAGCTCTCGGTTTTGCAGAACATGG

BS11581.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:11:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG33970-PA 2334 CG33970-RA 1..874 17..890 4370 100 Plus
CG33970-PB 1557 CG33970-RB 1..97 794..890 485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:20:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG33970-RC 3989 CG33970-RC 628..1505 13..890 4375 99.9 Plus
CG33970-RA 3387 CG33970-RA 628..1505 13..890 4375 99.9 Plus
CG33970-RB 2072 CG33970-RB 70..190 770..890 605 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:19:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26349599..26349864 410..675 1330 100 Plus
3R 32079331 3R 26331404..26331643 13..252 1185 99.6 Plus
3R 32079331 3R 26348914..26349074 253..413 805 100 Plus
3R 32079331 3R 26355599..26355720 769..890 610 100 Plus
3R 32079331 3R 26350078..26350173 674..769 480 100 Plus
3R 32079331 3R 28692548..28692742 557..751 240 74.9 Plus
Blast to na_te.dros performed on 2015-02-13 02:20:00 has no hits.

BS11581.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:13:38 Download gff for BS11581.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33970-PA 1..874 17..890 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:46:03 Download gff for BS11581.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33970-PA 1..874 17..890 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:10:03 Download gff for BS11581.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33970-RA 628..1505 13..890 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:10:15 Download gff for BS11581.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33970-RA 628..1505 13..890 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:10:15 Download gff for BS11581.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26331404..26331643 13..252 99 -> Plus
3R 26348914..26349073 253..412 100 -> Plus
3R 26349602..26349864 413..675 100 -> Plus
3R 26350080..26350173 676..769 100 -> Plus
3R 26355600..26355720 770..890 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:10:03 Download gff for BS11581.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22157126..22157365 13..252 99 -> Plus
arm_3R 22174636..22174795 253..412 100 -> Plus
arm_3R 22175324..22175586 413..675 100 -> Plus
arm_3R 22175802..22175895 676..769 100 -> Plus
arm_3R 22181322..22181442 770..890 100   Plus

BS11581.complete Sequence

2366 bp assembled on 2010-05-13

GenBank Submission: KX804212

> BS11581.complete
GAAGTTATCAGTCGACATGGACGCCGCTGCCGACGGAGTACCGCCAACGG
CGCCAGCTGCGACGGCGACGACGGCCAACAGTGATCTGGACTTGGCGGCA
CGTCGGCGTCTCTTCATCTCACAGCCCTCGACGCTGGCGACGCGCCGCCA
GCAGGCGGTTTGTGTGCGGCGGGCCCACAAAATGTATGGCAGCAGCAAGA
ACCCCAACGTTGTCCTCGACGGCCTGAACATGACAGTGCCCAAGGGTTCC
ATATATGGTCTCTTGGGCGCATCTGGATGCGGGAAAACAACGCTGCTCAG
CTGCATCGTCGGACGACGTCGCCTTAATTCTGGCGAGATTTGGGTACTCG
GCGGGCGACCCGGATCTCGGGGTTCCGGAGTGCCTGGACCCCGGATTGGC
TATATGCCACAGGAGATAGCCCTTTACGGCGAGTTCACGATGCGTGAGAC
CTTAATCTACTTCGGCATCATTTCTGCCATGTCCAAAGGCGACATCGAGG
ATCGTACAGAATTCCTTCTCAAATTACTTAATTTGCCAAATGCCTCCAAA
TTTGTCAAGAATCTGAGTGGCGGCCAGCAGCGGCGAGTGAGTCTGGCGGT
GGCTCTGCTCCATGAGCCGGAGCTACTCATCCTGGATGAGCCCACAGTGG
GGGTGGACCCCGTTTTGCGTCAGAGCATCTGGGATCATTTGGTGGACATT
ACGAAAAATGGTCACACGACTGTGATAATCACCACGCATTACATCGACGA
GTGTGCCCAGGCGCATATGATCGGTCTACTGCGTGGTGGAAAAATGCTGG
CAGAGGAATCGCCGGACTATCTGCGTCAGCAGTATAATGCCGACTCGCTG
GAGGATGTCTTCCTGAAGCTCTCGGTTTTGCAGAACATGGGAAAACGCCG
CCGATCGTCGATAGCTCAGGAAATTGTGGAACAGGTAACGGTGCCGGCGA
TCTCTAATCCCGCCTTGGACATGTCCGATGAGCAGCATGCCGCCGAAATT
TCCGGCGAGTTCGGTGACAACATTTCAATGTCGTCCGCGGCTCGAGATCC
GATCAGTACAACCGCACCCGCAGCTCCGCCTTTGCCACCGCCCCAGGAAA
TACCCACATCCTTCTGGTATAATCTACATGTGATGCAGTCGCATCACCTG
CACGCCCTCATCTGGAAAAACTTCTTGTGGATGATGCGCAACGTGGGGGT
GATGCTGTTCATCGTGGGTCTGCCCGTGGTGCAGATACTGCTCTTCTGTT
ACGCCATCGGCCATGATCCCACTGGCCTCAAATTGGCCGTGGCGAATCAC
GAGATGTCGGGGGAAATGATTATGGAACAATTCTGTCCAGTGCACACCGG
ATGCAATCAGACGATGCTGAGCTGCCGTTATCTCGATATGCTGGTCAAGA
ACAAGAGCATGGTTGTGCAATATGTGACCGACGATGAAATGGCTTACGAA
GAAGTAAGAAAAGGTAGAGCCTGGGCCGCCCTGGTAATCCAACCCAACTA
TACCGCATCTCTGATGGAACGCGTGGAGGATGGTCGGTATGCCGAAGATG
GAACTATTGAGTCCTCGGACCTAGCAGTACGAATGGACTGGTCAAATCAA
CAAATCTCACAGTTGCTGTACCGCGATCTCCAGTACACATTCTTCAACTT
TGTGGGTGACATGCTAAGCGACTGTGATGTGAATCCGAAACTAGGTCGTG
TGCCCGTGGACTTCCAGCATCCTGTTTATGGCTATCGCAATCCCAATTTC
ACAGACTTTGCTGCTCCCGGAGTTATCCTGACGATCATCTTCTTTTTGGC
CGTGGCTGTTACCTCCGGAGCTATGTTAATTGATCGGAATGAGGGCATGT
TGGAGCGTTGTTTGGTAGCTGGAATCACGGGTCCGGAGATTCTTCTCTCC
CAGGTGGTCACCCAGTTCACGGTGATGCTAAGCCAGACGACCTTCGTACT
GATTGTCAGCTTCTACTTCTTCGAACTTACCTTGGTGGGTAACATATGGC
TGGTGGTGGCACTCTGCATCCTGAATGGACTGTGTGGCATGAGCTTCGGA
TTCGTTATTTCCTGTGCTGTGGACACGGAGCGAACTGCGACTTATGTGGC
GATGGGCTCGTTCTTGCCCATCGTTATGTTGTGCGGCATTATCTGGCCGA
TCGAGGGCATGTTCCCGCTTCTGCAGTTCTTCACAGCCTTCCTGCCGCTC
ACCAAACCAACGGAATCAATGCGATCCATACTGCAACGCGGCTGGGGCAT
CGACAATCCCGTCGTCTACAATGGGTTTATTTCCATTTCTTCCTGGGTTC
TGGTATTCCTCGTACTTACCATCCTGCTGCTCAAGTTCAAGAAGGGATAA
AAGCTTTCTAGACCAT

BS11581.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG33970-RC 2334 CG33970-PC 1..2334 17..2350 11670 100 Plus
CG33970-RA 2334 CG33970-PA 1..2334 17..2350 11670 100 Plus
CG33970-RB 1557 CG33970-PB 1..1557 794..2350 7785 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:17:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG33970-RC 3989 CG33970-RC 628..2965 13..2350 11675 100 Plus
CG33970-RA 3387 CG33970-RA 628..2965 13..2350 11675 100 Plus
CG33970-RB 2072 CG33970-RB 70..1650 770..2350 7905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:17:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26360810..26361564 1596..2350 3775 100 Plus
3R 32079331 3R 26355599..26356028 769..1198 2150 100 Plus
3R 32079331 3R 26349599..26349864 410..675 1330 100 Plus
3R 32079331 3R 26331404..26331643 13..252 1185 99.6 Plus
3R 32079331 3R 26356215..26356435 1197..1417 1105 100 Plus
3R 32079331 3R 26360563..26360741 1417..1595 895 100 Plus
3R 32079331 3R 26348914..26349074 253..413 805 100 Plus
3R 32079331 3R 26350078..26350173 674..769 480 100 Plus
3R 32079331 3R 28692548..28692742 557..751 240 74.9 Plus
Blast to na_te.dros performed on 2014-11-28 02:17:25 has no hits.

BS11581.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-13 14:01:15 Download gff for BS11581.complete
Subject Subject Range Query Range Percent Splice Strand
CG33970-RA 629..2960 17..2348 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:15:42 Download gff for BS11581.complete
Subject Subject Range Query Range Percent Splice Strand
CG33970-RA 632..2963 17..2348 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:25:57 Download gff for BS11581.complete
Subject Subject Range Query Range Percent Splice Strand
CG33970-RA 632..2963 17..2348 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:25:57 Download gff for BS11581.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26348914..26349073 253..412 100 -> Plus
3R 26331408..26331643 17..252 100 -> Plus
3R 26349602..26349864 413..675 100 -> Plus
3R 26350080..26350173 676..769 100 -> Plus
3R 26355600..26356027 770..1197 100 -> Plus
3R 26356216..26356435 1198..1417 100 -> Plus
3R 26360564..26360741 1418..1595 100 -> Plus
3R 26360810..26361562 1596..2348 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:15:42 Download gff for BS11581.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22186286..22186463 1418..1595 100 -> Plus
arm_3R 22174636..22174795 253..412 100 -> Plus
arm_3R 22175324..22175586 413..675 100 -> Plus
arm_3R 22157130..22157365 17..252 100 -> Plus
arm_3R 22175802..22175895 676..769 100 -> Plus
arm_3R 22181938..22182157 1198..1417 100 -> Plus
arm_3R 22181322..22181749 770..1197 100 -> Plus
arm_3R 22186532..22187284 1596..2348 100   Plus

BS11581.pep Sequence

Translation from 16 to 2349

> BS11581.pep
MDAAADGVPPTAPAATATTANSDLDLAARRRLFISQPSTLATRRQQAVCV
RRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGR
RRLNSGEIWVLGGRPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFG
IISAMSKGDIEDRTEFLLKLLNLPNASKFVKNLSGGQQRRVSLAVALLHE
PELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDECAQAH
MIGLLRGGKMLAEESPDYLRQQYNADSLEDVFLKLSVLQNMGKRRRSSIA
QEIVEQVTVPAISNPALDMSDEQHAAEISGEFGDNISMSSAARDPISTTA
PAAPPLPPPQEIPTSFWYNLHVMQSHHLHALIWKNFLWMMRNVGVMLFIV
GLPVVQILLFCYAIGHDPTGLKLAVANHEMSGEMIMEQFCPVHTGCNQTM
LSCRYLDMLVKNKSMVVQYVTDDEMAYEEVRKGRAWAALVIQPNYTASLM
ERVEDGRYAEDGTIESSDLAVRMDWSNQQISQLLYRDLQYTFFNFVGDML
SDCDVNPKLGRVPVDFQHPVYGYRNPNFTDFAAPGVILTIIFFLAVAVTS
GAMLIDRNEGMLERCLVAGITGPEILLSQVVTQFTVMLSQTTFVLIVSFY
FFELTLVGNIWLVVALCILNGLCGMSFGFVISCAVDTERTATYVAMGSFL
PIVMLCGIIWPIEGMFPLLQFFTAFLPLTKPTESMRSILQRGWGIDNPVV
YNGFISISSWVLVFLVLTILLLKFKKG*

BS11581.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG33970-PC 777 CG33970-PC 1..777 1..777 4028 100 Plus
CG33970-PA 777 CG33970-PA 1..777 1..777 4028 100 Plus
CG33970-PB 518 CG33970-PB 1..518 260..777 2696 100 Plus
CG9990-PD 763 CG9990-PD 4..763 18..777 1867 51.3 Plus
CG9990-PB 777 CG9990-PB 4..777 18..777 1859 50.9 Plus