Clone Sequence Records
BS11592.5prime Sequence
519 bp (518 high quality bases) assembled on 2006-05-08
> BS11592.5prime
GAAGTTATCAGTCGACATGGGAATGGTATCGAAACGCAAGAAGATGCACT
ATGGCGATACCCATCTGCAGAGGAGATGGCGTGTGCGGAATCGACGTCGT
GATCTCGACCAGATCGACGACGATCTGCAGACCCGGAGCGGTGAACTGAT
CAATCAGAATGTGGATCTCGACAAGCCGGGATTCGCGCAGTTCTACTGCG
TGCACTGTGCCAAGTACTTCATCGATGACACCGCCATGCAGGCACATTTC
CGCACCAAGGTGCACAAGAGGCGTCTCAAGGCCCTAGAGATCGAGCCGTA
CAGCATCGAGGAGGCGGAACGCGCCGCGGGACGTGGCAGCTTCGTGAAGC
CCAAGAAGCGGGCGATGGAAACGCAGCCATCGAAGGAGGACGTGGTCGCT
GGCAAGAGGATCCGAGTGGAAGTGGTGCCCGAGGATACAGATGCCACCGA
TTCGCCATCGACGTCCAAAACGAAGCGCAAGAAAGTCGAGAAAATGGAGA
CATAGAAGCTTTCTAGACC
BS11592.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3224-PA | 489 | CG3224-RA | 1..489 | 17..505 | 2445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:23:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3224-RA | 851 | CG3224-RA | 231..719 | 17..505 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:23:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6660684..6661172 | 505..17 | 2445 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:23:44 has no hits.
BS11592.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:14:00 Download gff for
BS11592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-PA | 1..489 | 17..505 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:46:32 Download gff for
BS11592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-PA | 1..489 | 17..505 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:41:33 Download gff for
BS11592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 223..721 | 8..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:56:14 Download gff for
BS11592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 223..721 | 8..509 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:56:14 Download gff for
BS11592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6660682..6661180 | 8..509 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:41:33 Download gff for
BS11592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6554715..6555213 | 8..509 | 99 | | Minus |
BS11592.3prime Sequence
519 bp (518 high quality bases) assembled on 2006-05-08
> BS11592.3prime
ATGGTCTAGAAAGCTTCTATGTCTCCATTTTCTCGACTTTCTTGCGCTTC
GTTTTGGACGTCGATGGCGAATCGGTGGCATCTGTATCCTCGGGCACCAC
TTCCACTCGGATCCTCTTGCCAGCGACCACGTCCTCCTTCGATGGCTGCG
TTTCCATCGCCCGCTTCTTGGGCTTCACGAAGCTGCCACGTCCCGCGGCG
CGTTCCGCCTCCTCGATGCTGTACGGCTCGATCTCTAGGGCCTTGAGACG
CCTCTTGTGCACCTTGGTGCGGAAATGTGCCTGCATGGCGGTGTCATCGA
TGAAGTACTTGGCACAGTGCACGCAGTAGAACTGCGCGAATCCCGGCTTG
TCGAGATCCACATTCTGATTGATCAGTTCACCGCTCCGGGTCTGCAGATC
GTCGTCGATCTGGTCGAGATCACGACGTCGATTCCGCACACGCCATCTCC
TCTGCAGATGGGTATCGCCATAGTGCATCTTCTTGCGTTTCGATACCATT
CCCATGTCGACTGATAACT
BS11592.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:12:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3224-PA | 489 | CG3224-RA | 1..489 | 505..17 | 2445 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:46:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3224-RA | 851 | CG3224-RA | 231..719 | 505..17 | 2445 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:46:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6660684..6661172 | 17..505 | 2445 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 03:46:53 has no hits.
BS11592.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:13:59 Download gff for
BS11592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-PA | 1..489 | 17..505 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 12:46:31 Download gff for
BS11592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-PA | 1..489 | 17..505 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:51:50 Download gff for
BS11592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 223..721 | 13..514 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:50:07 Download gff for
BS11592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 223..721 | 13..514 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:50:07 Download gff for
BS11592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6660682..6661180 | 13..514 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:51:50 Download gff for
BS11592.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6554715..6555213 | 13..514 | 99 | | Plus |
BS11592.complete Sequence
521 bp assembled on 2006-11-01
GenBank Submission: FJ636910
> BS11592.complete
GAAGTTATCAGTCGACATGGGAATGGTATCGAAACGCAAGAAGATGCACT
ATGGCGATACCCATCTGCAGAGGAGATGGCGTGTGCGGAATCGACGTCGT
GATCTCGACCAGATCGACGACGATCTGCAGACCCGGAGCGGTGAACTGAT
CAATCAGAATGTGGATCTCGACAAGCCGGGATTCGCGCAGTTCTACTGCG
TGCACTGTGCCAAGTACTTCATCGATGACACCGCCATGCAGGCACATTTC
CGCACCAAGGTGCACAAGAGGCGTCTCAAGGCCCTAGAGATCGAGCCGTA
CAGCATCGAGGAGGCGGAACGCGCCGCGGGACGTGGCAGCTTCGTGAAGC
CCAAGAAGCGGGCGATGGAAACGCAGCCATCGAAGGAGGACGTGGTCGCT
GGCAAGAGGATCCGAGTGGAAGTGGTGCCCGAGGATACAGATGCCACCGA
TTCGCCATCGACGTCCAAAACGAAGCGCAAGAAAGTCGAGAAAATGGAGA
CATAGAAGCTTTCTAGACCAT
BS11592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:39:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3224-RA | 489 | CG3224-PA | 1..489 | 17..505 | 2445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:39:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3224-RA | 851 | CG3224-RA | 231..719 | 17..505 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:39:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6660684..6661172 | 505..17 | 2445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:39:29 has no hits.
BS11592.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:22:11 Download gff for
BS11592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 1..489 | 17..505 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:54:14 Download gff for
BS11592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 208..706 | 8..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:21:21 Download gff for
BS11592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 231..719 | 17..505 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:22:11 Download gff for
BS11592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 208..706 | 8..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:52:57 Download gff for
BS11592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 231..719 | 17..505 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:52:57 Download gff for
BS11592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6660684..6661172 | 17..505 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:21:21 Download gff for
BS11592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6554717..6555205 | 17..505 | 100 | | Minus |
BS11592.pep Sequence
Translation from 16 to 504
> BS11592.pep
MGMVSKRKKMHYGDTHLQRRWRVRNRRRDLDQIDDDLQTRSGELINQNVD
LDKPGFAQFYCVHCAKYFIDDTAMQAHFRTKVHKRRLKALEIEPYSIEEA
ERAAGRGSFVKPKKRAMETQPSKEDVVAGKRIRVEVVPEDTDATDSPSTS
KTKRKKVEKMET*
BS11592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:39:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3224-PA | 162 | CG3224-PA | 1..162 | 1..162 | 844 | 100 | Plus |
