BS11637.complete Sequence
2768 bp assembled on 2009-12-07
GenBank Submission: KX803266
> BS11637.complete
GAAGTTATCAGTCGACATGATAACTGCTAAGAAGCACCCGCTGGACAATT
GCCAATTGTTTGTCCAGCTGAAGAAGTTATTTCATGACTACAACGAGAAG
GTCCAGCGTCTGAAGGACATGATTTACTGGAGTGGAAACGATGAGCACAT
TGCGAAGATCTGCGACCAAGTGACGGACCTGCTGGTGGAGCACGATCTAA
TCATACAGCCGCCAGACACAATGGATCCTTGTGCTATGAATCACCTGCGT
GGACTACTGGTGTACCTGGTGCTGAACACTGCACACGATGATATCCAGTG
CGAATCGCAGTGGAGCGCCAATGTCATGCATTTGTGTAACCAGCTGCCGC
CTATCCCACTGTTCTTGACCATCGCAATAGCCGTTAACTGCTGTCTCATG
GAGCCGCTGGAGGAATTCCTTGCTTGTGGACCCCGCTGGCTGACCATCCA
GTATTTTGAGGCATTCAATGAGGCTCTGTCGGTCATTAATTCAGATTGCG
TGGAAACACTACCGCTGCTCTCTGCCGCCCTCAGAGCAGCCGGTCGCGCA
ATTGTCAACTGCAATTTGCCCGCAGAAAATAAGCAACTGCTGCGCCAGAT
AGCCTGCATGGAACATCGTCATATCTTGGACTCTAAACAGCGCCTCCATA
CGCTGCCGCGTCCATCCACTCGAAAGATTTACCTGGCCAAGGCTATGGAT
CACCTTATAGAAGTCCTTTTGTATACCCTCAATGATCCATTAAAGCGGGA
GAAACCAAATTGCTTCGCCGTCTACAGCCAAATAACCGAGGACATCAGTG
ACAGCAACTCAAGCGATCCCATGCCTGATCTGCGGCATTTCGCCCAAATA
CTGCTAGACGTTCTGCAGCGTATCTTTCAGCTCGTTAGCGTAGACACGTA
TATGTATTGGCATGAAATGAAATCGAAAAGTGCTTTGTATAACTGCCAGG
AGCTAATCTGTAGACAGACGGCAGAATTGCTTAAAGTACTCCAATCAGAT
AAGTTGCTCGGAGAGCATCCGGTTTGCAAGCAGATGCAGAGCTTTGCGGA
TGCAGCAAAAACATTGGAGCAGCGCGTTGCCGAGATGAGAATCGGTGAAC
TCTTGGCCTTTATCGATTCCGGTATGGCCACCAATGAGGAGTTGCTCGCC
GGGCTGGACAATCTCTTTAGCCGCTTCATAGCCTTTGGCAGCGATGAGTG
CCTGGAAACGATGGCAAATCATTTAATTATGCTCACCAAGAAACATGCCC
AGATAATACTCAGTTTCCTGGGTCAGGTGGTGGAGTCCGAAATGGTGGTC
GAGGACGAGGGCATATCCGTTACGGAAGTAAATCAGGGGGACGACGAGGA
CGAGACCTCGTCCAACGATGATTACGAAGAGCTGCTAAGCCTAGTACTGC
GTCCCTTATTTATGCAATTAAATGTCGAGGACAAGATGGAAGTACTGCTA
TTACGCGATGAGCAAAACGTTACCCAAGGATTTAATTTCAAGGCTCCCGA
TCATCGGGAGCGTCGCATACGCTTCTTTAATCAATTGGATTATAATAAGC
GCTTCCCGATAACCGAATTTTTAGTACTGTGCTTTGAGAACGCAAGACAG
ACCTGGATTGATTTCTCCCACTTGGGCGTGACGCATACTCGCTTCTCGAA
GCTATTCTGGCACATAGCTCAGTCTTGTCCCAAGCATGCTGCTTTTCATA
TTTCCGCCTGTGCCGATAACATCTTGGTGAACGAGCAACTACTTCAAAAG
CCGTATGCCTTGCAGTTTACACTCTACCTATATGGCCACCGACAGATCCT
CAACGGTCTCTACACGTCAGCGCGACAACTGTGCGTTAGTTTGAAAGACG
GACGGTGTCCCTACGGAGAGGATGAGCTTAGGCAGGCGCAAAATAGGTTC
CTAGACGCGTGTGCCTACGGTTTGGCCAAGTTTATAGAGCCCATGAACTT
GCCCAGCTTGCAGTTAATCTTGAAACTGCTCAAGCAGATTAGTCTGGGTG
AAAGCAATCTAATCACCCGAGGCACTGCAGAGTTAAATGCACTCGAAAAG
GAGCACCCGAAATTGGAGAACGGAGACGATGCACCAGCTGTCAAGGTGGC
CAAGCACTACACATATCTGCATGCCAGTTTGCCAGAGTGGCGTTTGAAAC
ACTGGAAGCTGATCTCGCATGTCATGAAAACCATTGATGCCCTACGCTGG
GACTTGGCCACCTTTGAAGATTTCCGGGTGGATAATTTAGAACTGGCGGT
GTGGTATTGGCAGGACGGTCTGTCTCATCTGACATTCCTAGGCACTGAAT
TCCGCCAGAGGATCTTAAACCAAGTGAGCAAATTGAAGCACAAGGACTTT
TGGATCATCTACCTTAAAGAAGACACCTTAAAGGACACACGCTCCTTTCT
CAAATTGCTAACTCAGTCCAGTGCACAGGAGGCTAACGATCTCTTCAACA
AGCTCCTTAAAAAAAGGGCCGATTGTGCTGTTATGGGCGATCTTAGCGAT
GCAGTGGTCAAGGTGAACAGCGAGTCCGCTTTCATGGCCTTTAGATTCCT
ATTTCGAGAATATTTGATCGCCTTCCGGAGCCACGCCAAACACAATAAGA
CCATCACGAAGCGCCAGCATTGGGATCATTTGATGGCCGTTGTGGCCAAG
GCTCCATTCTCCATTCGCAACGAGATTATGGAGCTAGCTAGTAAAGCCTT
CGCTGTGCGATTCGGCATAAATATCCAGGAACAGCAGGCGGCCAAGTGTT
AAAAGCTTTCTAGACCAT
BS11637.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2941-RB | 2736 | CG2941-PB | 1..2736 | 17..2752 | 13680 | 100 | Plus |
| CG2941-RA | 2736 | CG2941-PA | 1..2736 | 17..2752 | 13680 | 100 | Plus |
| CG32786-RB | 2736 | CG32786-PB | 1..2736 | 17..2752 | 12960 | 98.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2941-RB | 3954 | CG2941-RB | 306..3041 | 17..2752 | 13680 | 100 | Plus |
| CG2941-RA | 3378 | CG2941-RA | 306..3041 | 17..2752 | 13680 | 100 | Plus |
| CG32786-RB | 3307 | CG32786-RB | 214..2949 | 17..2752 | 12960 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3936992..3939155 | 134..2297 | 10820 | 100 | Plus |
| X | 23542271 | X | 3941230..3943393 | 134..2297 | 10430 | 98.8 | Plus |
| X | 23542271 | X | 3945426..3947589 | 134..2297 | 10385 | 98.7 | Plus |
| X | 23542271 | X | 3939210..3939669 | 2293..2752 | 2285 | 99.8 | Plus |
| X | 23542271 | X | 3943448..3943907 | 2293..2752 | 2150 | 97.8 | Plus |
| X | 23542271 | X | 3947644..3948103 | 2293..2752 | 2135 | 97.6 | Plus |
| X | 23542271 | X | 3936822..3936940 | 17..135 | 595 | 100 | Plus |
| X | 23542271 | X | 3941060..3941178 | 17..135 | 400 | 89.1 | Plus |
| X | 23542271 | X | 3945256..3945374 | 17..135 | 400 | 89.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:21:06 has no hits.
BS11637.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:48:41 Download gff for
BS11637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2941-RA | 303..3036 | 17..2750 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:07 Download gff for
BS11637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2941-RA | 303..3036 | 17..2750 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:00:20 Download gff for
BS11637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2941-RA | 303..3036 | 17..2750 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:09:33 Download gff for
BS11637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2941-RA | 306..3039 | 17..2750 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:33 Download gff for
BS11637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3936822..3936939 | 17..134 | 100 | -> | Plus |
| X | 3936993..3939155 | 135..2297 | 100 | -> | Plus |
| X | 3939215..3939667 | 2298..2750 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:07 Download gff for
BS11637.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3830855..3830972 | 17..134 | 100 | -> | Plus |
| arm_X | 3831026..3833188 | 135..2297 | 100 | -> | Plus |
| arm_X | 3833248..3833700 | 2298..2750 | 100 | | Plus |
BS11637.pep Sequence
Translation from 16 to 2751
> BS11637.pep
MITAKKHPLDNCQLFVQLKKLFHDYNEKVQRLKDMIYWSGNDEHIAKICD
QVTDLLVEHDLIIQPPDTMDPCAMNHLRGLLVYLVLNTAHDDIQCESQWS
ANVMHLCNQLPPIPLFLTIAIAVNCCLMEPLEEFLACGPRWLTIQYFEAF
NEALSVINSDCVETLPLLSAALRAAGRAIVNCNLPAENKQLLRQIACMEH
RHILDSKQRLHTLPRPSTRKIYLAKAMDHLIEVLLYTLNDPLKREKPNCF
AVYSQITEDISDSNSSDPMPDLRHFAQILLDVLQRIFQLVSVDTYMYWHE
MKSKSALYNCQELICRQTAELLKVLQSDKLLGEHPVCKQMQSFADAAKTL
EQRVAEMRIGELLAFIDSGMATNEELLAGLDNLFSRFIAFGSDECLETMA
NHLIMLTKKHAQIILSFLGQVVESEMVVEDEGISVTEVNQGDDEDETSSN
DDYEELLSLVLRPLFMQLNVEDKMEVLLLRDEQNVTQGFNFKAPDHRERR
IRFFNQLDYNKRFPITEFLVLCFENARQTWIDFSHLGVTHTRFSKLFWHI
AQSCPKHAAFHISACADNILVNEQLLQKPYALQFTLYLYGHRQILNGLYT
SARQLCVSLKDGRCPYGEDELRQAQNRFLDACAYGLAKFIEPMNLPSLQL
ILKLLKQISLGESNLITRGTAELNALEKEHPKLENGDDAPAVKVAKHYTY
LHASLPEWRLKHWKLISHVMKTIDALRWDLATFEDFRVDNLELAVWYWQD
GLSHLTFLGTEFRQRILNQVSKLKHKDFWIIYLKEDTLKDTRSFLKLLTQ
SSAQEANDLFNKLLKKRADCAVMGDLSDAVVKVNSESAFMAFRFLFREYL
IAFRSHAKHNKTITKRQHWDHLMAVVAKAPFSIRNEIMELASKAFAVRFG
INIQEQQAAKC*
BS11637.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:55:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2941-PB | 911 | CG2941-PB | 1..911 | 1..911 | 4764 | 100 | Plus |
| CG2941-PA | 911 | CG2941-PA | 1..911 | 1..911 | 4764 | 100 | Plus |
| CG32786-PB | 911 | CG32786-PB | 1..911 | 1..911 | 4615 | 96.8 | Plus |
| CG32783-PB | 911 | CG32783-PB | 1..911 | 1..911 | 4598 | 96.4 | Plus |
