Clone BS11664 Report

Search the DGRC for BS11664

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:116
Well:64
Vector:pDNR-Dual
Associated Gene/Transcriptfj-RA
Protein status:BS11664.pep: full length peptide match
Sequenced Size:1784

Clone Sequence Records

BS11664.complete Sequence

1784 bp assembled on 2009-12-07

GenBank Submission: KX805931

> BS11664.complete
GAAGTTATCAGTCGACATGTACGACATCAAGCGCCTGGAAGCGGGACAAC
AGAAACTACAGCAAGCACAGCAACCACTGGGCCTTGACCTGAGCGGCCAG
CAACAGCAACTCACCTGCAGCGTGATCACAGCGCCCGAGCATCGGGCTAA
TCCCAATCCCAGCTCCATTTCGCAATCCAACCCCAGCGAGGCCACCCACA
TGACTTTGTTGACGCTGCGCCGGCGCCGTTCGCTGCAGCGACGCGCCTGC
CTTCTGAGCATCCTCGCCGCCTTCGTCTTTGGCATGGCACTGGGCGTTGT
TGTGCCCATGTTCGGCCTGCCCCGCCACCAGGACTCCCCGCCAGATCTGC
CGGAGGAGCAGATACAGATGGTTGCCGTGGAGCCGCTGAGCAGCTACCGC
GTGGAGTTCATCAAGGAGACGGACGAGCTGAGTGCCGAGCAGGTATTCCG
CAATGCCTTCCATCTGGAGCAGGACAAGGATGCTCCGGACTCGATGGTGG
TGAAGAAATTGGACACCAACGACGGCAGCATCAAGGAATTCCATGTGCAG
CGCACCGCCAGCGGTCGTTATCGCAAGGGTCCGGAGAGGAGGCTGTCCAA
GAAGATGCCGGAAAGGGTGCAGCCACAAGAGACCTCTCGTTCTCCGACGA
CCTCGCCGACAAATCCTACCAGTGAGCACCAAGCGGGATTTATTGAGGAG
GACGTCTATTGGGGTCCCACTGTGGAGCAGGCTCTGCCCAAGGGATTCGC
CGCCAAGGACCAAGTCTCTTGGGAACGCTTCGTTGGAGAGCAGGGCCGAG
TAGTTCGCCTGGAGCAGGGATGCGGAAGAATGCAAAATCGCATGGTGGTC
TTTGCGGATGGAACAAGGGCCTGTGCCCGCTACCGCCAGAATACGGATCA
GATTCAGGGCGAGATATTCAGCTACTACTTGGGCCAGCTCTTAAACATAA
GCAATCTGGCCCCGAGTGCCGCCACCGTGGTGGACACCAGCACGCCCAAT
TGGGCCGCTGCCCTGGGCGACATTACACAGGCGCAGTGGAAGGAGCGCCG
ACCAGTGGTGCTGACCCGCTGGCTGTCCGATCTGGAGCCGGCTGGGATAC
CACAGCCCTTTCAGCCGCTGGAGCGGCATCTCAACAAACACGACGTCTGG
AACCTGACGCGGCACATGCAATCCGAAAGGCAAGCGCAATCGCAGCCGCA
CGGATTACTCAAGCGGTTGGGGGCTGCCAGTTCGCCCGGCTCCGCTCATC
AATCAAACGCGATTGAGGAGACAGGAACAGGAACCGAAACGGCCAACGGA
GCGCTGGTGCAGCGACTAATTGAATTGGCACAATGGTCCGATTTAATCGT
CTTCGATTACCTGATCGCGAACCTCGATCGCGTGGTTAATAACCTGTACA
ACTTTCAATGGAACGCCGACATCATGGCCGCGCCGGCGCACAACCTTGCC
CGCCAGTCCGCCTCGCAGCTGCTCGTCTTCCTGGACAACGAAAGCGGCCT
GCTGCACGGCTACCGGCTGTTGAAGAAGTACGAGGCATACCACAGCCTCC
TGCTCGACAACCTGTGCGTCTTCCGGCGGCCCACAATCGACGCCCTGCGA
CGTTTGCGGGCGGCGGGTGCGGGACGCCGGCTGCGTGACCTCTTCGAGCG
GACGACCAGCGCCGGAGTGCGGGATGTTTTACCTTCTCTGCCGGACAAGT
CCGTGAAAATCCTGGTGGAGCGCATCGATCGGGTGCTGGGCCAGGTGCAG
AAGTGCCAGGGCAGCTAAAAGCTTTCTAGACCAT

BS11664.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:23:18
Subject Length Description Subject Range Query Range Score Percent Strand
fj-RA 1752 CG10917-PA 1..1752 17..1768 8760 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
fj-RA 3551 CG10917-RA 1350..3101 17..1768 8760 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18234110..18235861 17..1768 8760 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:23:17 has no hits.

BS11664.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:10 Download gff for BS11664.complete
Subject Subject Range Query Range Percent Splice Strand
fj-RA 1348..3097 17..1766 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:01 Download gff for BS11664.complete
Subject Subject Range Query Range Percent Splice Strand
fj-RA 1350..3099 17..1766 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:10:06 Download gff for BS11664.complete
Subject Subject Range Query Range Percent Splice Strand
fj-RA 1348..3097 17..1766 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:23 Download gff for BS11664.complete
Subject Subject Range Query Range Percent Splice Strand
fj-RA 1350..3099 17..1766 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:23 Download gff for BS11664.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18234110..18235859 17..1766 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:01 Download gff for BS11664.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14121615..14123364 17..1766 100   Plus

BS11664.pep Sequence

Translation from 16 to 1767

> BS11664.pep
MYDIKRLEAGQQKLQQAQQPLGLDLSGQQQQLTCSVITAPEHRANPNPSS
ISQSNPSEATHMTLLTLRRRRSLQRRACLLSILAAFVFGMALGVVVPMFG
LPRHQDSPPDLPEEQIQMVAVEPLSSYRVEFIKETDELSAEQVFRNAFHL
EQDKDAPDSMVVKKLDTNDGSIKEFHVQRTASGRYRKGPERRLSKKMPER
VQPQETSRSPTTSPTNPTSEHQAGFIEEDVYWGPTVEQALPKGFAAKDQV
SWERFVGEQGRVVRLEQGCGRMQNRMVVFADGTRACARYRQNTDQIQGEI
FSYYLGQLLNISNLAPSAATVVDTSTPNWAAALGDITQAQWKERRPVVLT
RWLSDLEPAGIPQPFQPLERHLNKHDVWNLTRHMQSERQAQSQPHGLLKR
LGAASSPGSAHQSNAIEETGTGTETANGALVQRLIELAQWSDLIVFDYLI
ANLDRVVNNLYNFQWNADIMAAPAHNLARQSASQLLVFLDNESGLLHGYR
LLKKYEAYHSLLLDNLCVFRRPTIDALRRLRAAGAGRRLRDLFERTTSAG
VRDVLPSLPDKSVKILVERIDRVLGQVQKCQGS*

BS11664.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:52:51
Subject Length Description Subject Range Query Range Score Percent Strand
fj-PA 583 CG10917-PA 1..583 1..583 3008 100 Plus