Clone BS11691 Report

Search the DGRC for BS11691

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:116
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG9773-RA
Protein status:BS11691.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS11691.3prime Sequence

858 bp (858 high quality bases) assembled on 2006-06-16

> BS11691.3prime
ATGGTCTAGAAAGCTTCTAATATACGCGATACTTGTAGAAATTGACAAAG
GATATCGTTGCGTTCCAACCAATAATTGTGACGACCAGAAACAGTAGAAA
GATGATGGGCAGGGCGATGAGAATGATGCGGGTGTTTTTCAGATGGGGAA
TGCAATTGTATCCCAGAAATGTGATGTACACATAATAGCCCATGCCCATC
AACCAAAAGGTGTTGCCCAGAAATCGCGAGATGAACCACGTTTGGCTGAT
CAGCCAGTTGTAGAAGAACAGCTGGATGAAGTGCAGCAGCATCAGTGGCG
GAAAGAAGGCATTTAGATGGACATCGAAGGCATAGCCCCACTCGATATCC
GGCTCCAGGCTATTTGTGCGCAGATACCGATTCGTCACCGCCCAGAAGAA
CGAGGCTATTATGATGCCCACGAAAATACAGTCCACGAATACCACATAGA
ATATGAACGAGATGCTCTGCCAGAAAGACAGTCCCAGCACATACGCAAAG
CCCAGGGAGGTGACACATAGGCAGACGACCAGGAGGACCAGAAAGGCCGG
ATCGTCGCGGGCGAACTGTGACTTGGTCTGTTTCCGGTAGTTGAAGTTCC
GGTACACCTTTTGGGGCGCCACAAAGAGGTAGAGCATCTGCCACAGGGCA
AACTCGAAGTCCATTTGATTGAACTTGAGCAGACGTCGCAGGTATTTGTA
GCTCTTGGTGGTCGCCGAGAGGCAGTCCCTCCGGTGGTTGGCGGGTGGCG
GTAATGGCGAATGGAGACGCGAGGCACTCGAGTAGCCGGAAACCACCGAC
GGCGTCGGCGATTGTGTATACTTAACGTGGCTATATTGAGTCATGTCGAC
TGATAACT

BS11691.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG9773-PA 828 CG9773-RA 1..828 844..17 4140 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:36:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG9773-RA 1021 CG9773-RA 96..923 844..17 4140 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:36:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8675572..8675933 153..514 1810 100 Plus
3R 32079331 3R 8676188..8676518 514..844 1655 100 Plus
3R 32079331 3R 8675381..8675517 17..153 685 100 Plus
Blast to na_te.dros performed on 2015-02-06 10:36:14 has no hits.

BS11691.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:28:55 Download gff for BS11691.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9773-PA 1..828 17..844 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:43:24 Download gff for BS11691.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9773-RA 96..923 17..844 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:27:40 Download gff for BS11691.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9773-RA 96..923 17..844 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:27:40 Download gff for BS11691.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 8675573..8675932 154..513 100 <- Plus
3R 8675381..8675517 17..153 100 <- Plus
3R 8676188..8676518 514..844 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:43:24 Download gff for BS11691.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4501103..4501239 17..153 100 <- Plus
arm_3R 4501295..4501654 154..513 100 <- Plus
arm_3R 4501910..4502240 514..844 100   Plus

BS11691.5prime Sequence

858 bp (836 high quality bases) assembled on 2006-06-16

> BS11691.5prime
GAAGTTATCAGTCGACATGACTCAATATAGCCACGTTAAGTATACACAAT
CGCCGACGCCGTCGGTGGTTTCCGGCTACTCGAGTGCCTCGCGTCTCCAT
TCGCCATTACCGCCACCCGCCAACCACCGGAGGGACTGCCTCTCGGCGAC
CACCAAGAGCTACAAATACCTGCGACGTCTGCTCAAGTTCAATCAAATGG
ACTTCGAGTTTGCCCTGTGGCAGATGCTCTACCTCTTTGTGGCGCCCCAA
AAGGTGTACCGGAACTTCAACTACCGGAAACAGACCAAGTCACAGTTCGC
CCGCGACGATCCGGCCTTTCTGGTCCTCCTGGTCGTCTGCCTATGTGTCA
CCTCCCTGGGCTTTGCGTATGTGCTGGGACTGTCTTTCTGGCAGAGCATC
TCGTTCATATTCTATGTGGTATTCGTGGACTGTATTTTCGTGGGCATCAT
AATAGCCTCGTTCTTCTGGGCGGTGACGAATCGGTATCTGCGCACAAATA
GCCTGGAGCCGGATATCGAGTGGGGCTATGCCTTCGATGTCCATCTAAAT
GCCTTCTTTCCGCCACTGATGCTGCTGCACTTCATCCAGCTGTTCTTCTA
CAACTGGCTGATCAGCCAAACGTGGTTCATCTCGCGATTTCTGGGCAACA
CCTTTTGGTTGATGGGCATGGGCTATTATGTGTACATCACATTTCTGGGA
TACAATTGCATTCCCCATCTGAAAAACACCCGCATCATTCTCATCGCCCT
GCCCATCATCTTTCTACTGTTTCTGGTCGTCACAATTATTGGTTGGAACG
CAACGATATCCTTTGTCAATTTCTACAAGTATCGCGTATATTAGAAACTT
TCTAGACC

BS11691.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG9773-PA 828 CG9773-RA 1..828 17..844 4140 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 10:36:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG9773-RA 1021 CG9773-RA 96..923 17..844 4140 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 10:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8675572..8675933 708..347 1810 100 Minus
3R 32079331 3R 8676188..8676518 347..17 1655 100 Minus
3R 32079331 3R 8675381..8675517 844..708 685 100 Minus
Blast to na_te.dros performed on 2015-02-06 10:36:27 has no hits.

BS11691.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:28:56 Download gff for BS11691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9773-PA 1..828 17..844 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 06:43:25 Download gff for BS11691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9773-RA 96..926 17..847 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:27:42 Download gff for BS11691.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9773-RA 96..926 17..847 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:27:42 Download gff for BS11691.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8676188..8676518 17..347 100   Minus
3R 8675378..8675517 708..847 99 <- Minus
3R 8675573..8675932 348..707 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 06:43:25 Download gff for BS11691.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4501910..4502240 17..347 100   Minus
arm_3R 4501100..4501239 708..847 99 <- Minus
arm_3R 4501295..4501654 348..707 100 <- Minus

BS11691.complete Sequence

860 bp assembled on 2006-11-01

GenBank Submission: FJ636931

> BS11691.complete
GAAGTTATCAGTCGACATGACTCAATATAGCCACGTTAAGTATACACAAT
CGCCGACGCCGTCGGTGGTTTCCGGCTACTCGAGTGCCTCGCGTCTCCAT
TCGCCATTACCGCCACCCGCCAACCACCGGAGGGACTGCCTCTCGGCGAC
CACCAAGAGCTACAAATACCTGCGACGTCTGCTCAAGTTCAATCAAATGG
ACTTCGAGTTTGCCCTGTGGCAGATGCTCTACCTCTTTGTGGCGCCCCAA
AAGGTGTACCGGAACTTCAACTACCGGAAACAGACCAAGTCACAGTTCGC
CCGCGACGATCCGGCCTTTCTGGTCCTCCTGGTCGTCTGCCTATGTGTCA
CCTCCCTGGGCTTTGCGTATGTGCTGGGACTGTCTTTCTGGCAGAGCATC
TCGTTCATATTCTATGTGGTATTCGTGGACTGTATTTTCGTGGGCATCAT
AATAGCCTCGTTCTTCTGGGCGGTGACGAATCGGTATCTGCGCACAAATA
GCCTGGAGCCGGATATCGAGTGGGGCTATGCCTTCGATGTCCATCTAAAT
GCCTTCTTTCCGCCACTGATGCTGCTGCACTTCATCCAGCTGTTCTTCTA
CAACTGGCTGATCAGCCAAACGTGGTTCATCTCGCGATTTCTGGGCAACA
CCTTTTGGTTGATGGGCATGGGCTATTATGTGTACATCACATTTCTGGGA
TACAATTGCATTCCCCATCTGAAAAACACCCGCATCATTCTCATCGCCCT
GCCCATCATCTTTCTACTGTTTCTGGTCGTCACAATTATTGGTTGGAACG
CAACGATATCCTTTGTCAATTTCTACAAGTATCGCGTATATTAGAAGCTT
TCTAGACCAT

BS11691.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:30:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG9773-RA 828 CG9773-PA 1..828 17..844 4140 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG9773-RA 1021 CG9773-RA 96..923 17..844 4140 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8675572..8675933 708..347 1810 100 Minus
3R 32079331 3R 8676188..8676518 347..17 1655 100 Minus
3R 32079331 3R 8675381..8675517 844..708 685 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:30:42 has no hits.

BS11691.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:49:09 Download gff for BS11691.complete
Subject Subject Range Query Range Percent Splice Strand
CG9773-RA 1..828 17..844 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:23:57 Download gff for BS11691.complete
Subject Subject Range Query Range Percent Splice Strand
CG9773-RA 71..898 17..844 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:26:02 Download gff for BS11691.complete
Subject Subject Range Query Range Percent Splice Strand
CG9773-RA 96..923 17..844 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:49:09 Download gff for BS11691.complete
Subject Subject Range Query Range Percent Splice Strand
CG9773-RA 71..898 17..844 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:33:11 Download gff for BS11691.complete
Subject Subject Range Query Range Percent Splice Strand
CG9773-RA 96..923 17..844 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:33:11 Download gff for BS11691.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8675381..8675517 708..844 100 <- Minus
3R 8675573..8675932 348..707 100 <- Minus
3R 8676188..8676518 17..347 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:26:02 Download gff for BS11691.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4501103..4501239 708..844 100 <- Minus
arm_3R 4501295..4501654 348..707 100 <- Minus
arm_3R 4501910..4502240 17..347 100   Minus

BS11691.pep Sequence

Translation from 16 to 843

> BS11691.pep
MTQYSHVKYTQSPTPSVVSGYSSASRLHSPLPPPANHRRDCLSATTKSYK
YLRRLLKFNQMDFEFALWQMLYLFVAPQKVYRNFNYRKQTKSQFARDDPA
FLVLLVVCLCVTSLGFAYVLGLSFWQSISFIFYVVFVDCIFVGIIIASFF
WAVTNRYLRTNSLEPDIEWGYAFDVHLNAFFPPLMLLHFIQLFFYNWLIS
QTWFISRFLGNTFWLMGMGYYVYITFLGYNCIPHLKNTRIILIALPIIFL
LFLVVTIIGWNATISFVNFYKYRVY*

BS11691.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:27:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG9773-PA 275 CG9773-PA 1..275 1..275 1478 100 Plus