BS11719.complete Sequence
1784 bp assembled on 2009-12-07
GenBank Submission: KX801900
> BS11719.complete
GAAGTTATCAGTCGACATGAAAATAAGCTACCGGGCATTTGTTCGCCAAG
TGCGGCATGCCTCCACGACTGCCTCGAAAGGAGCTACGACATCCGTTACC
TCCAGCGCAGCGGGTCAACTAAAATCAGAGCCGGCAGCACGTGCAACTTT
TCTGGAGAGGATTCAACGCGGACCGGGCTTCCAAGACTTTTTTGCGGTCA
AGCCTGCGTCAAGACTGAAAACTGATGAAGAGGAGCATGTGGACACCAGT
GTGCCGTACCTGAACTCGATTGATTTCAATGGAAACGGAAGGAAGGTCCA
CTTTGAGGTCTACGGATGCCAGATGAACACGAATGACACGGAGGTGGTGT
TCAGTATCCTGAAGGAGAATGGTTATTTGAGATGCCAGGAGCCGGAGGAG
GCCGATGTCATAATGCTCGTAACGTGCGCAGTGCGCGATGGAGCGGAGCA
GAGGATCAGGAACCGATTGAAGCACCTGCGAGCCATGAAGAACAAACGCA
GTACGCGGAGGCATCCTCTACAGCTGACACTGCTGGGTTGCATGGCGGAG
CGACTAAAGGAGAAGCTGCTGGAACAGGAGCAATGTGTGGATGTAATCGC
CGGACCCGATAGCTACAAGGATTTGCCGCGACTACTGGCTATCTCCCGGC
ATTATGGCAACTCGGCCATCAATGTGCTCCTCTCGCTGGACGAAACCTAT
GCGGATGTGATGCCCGTTCGCTTAAACTCCGAATCGCCCACTGCTTTTGT
GTCCATCATGCGCGGTTGTGACAACATGTGTACCTATTGTATAGTGCCCT
TCACCCGTGGACGCGAGCGCTCTCGCCCCCTGGCATCCATTGTGGCTGAG
GTCAAGGCATTGGCGGAACAGGGCGTGAAGGAGGTCACCCTGCTGGGTCA
GAATGTCAACTCGTACAGAGACAGAACTGCGCAGGAGGAACAGGACTCAC
TGAAAGCAACTCCAGTGCCCGGTTTTAGCACTGTTTACAAGCCCAAAACA
GGCGGGACTCCCTTTGCAGCATTGCTCCGATCCGTGGCTCAAGCTGTTCC
AGACATGCGCATCCGTTTCACCTCGCCGCATCCGAAGGATTTCTCCGACG
AAGTTCTGGAGGTCATCAGAGATCACCCGAATGTGTGCAAGCAACTTCAC
CTGCCAGCACAATCGGGCAATACCCAAGTTCTGGAAAGGATGCGACGTGG
TTACAGCAGAGAGGCTTATCTGGAACTTGTGCAGCACATCAGACAGTTTT
TGCCCAACGTGGGTCTGTCCAGCGATTTTATCTGCGGCTTTTGCGGTGAA
ACGGAAGAGGAGTTCCAAGACACTGTATCTCTTATCCAACAAGTGCAGTA
CAACGTGGCCTACTTGTTCGCCTACAGCATGCGAGAAAAGACCACTGCCC
ATCGGCGCTACAAAGATGATGTGCCCATAAACGTGAAGAATGAGCGACTG
CAGCGCATGGTCCAGGTTTTCCGAGAGGGAGCTACACAGCTACATCGTAA
AATGGAAGGCCAGGAGCAGCTCATACTTATAGAAGGGAAAAGCAAGAGGT
CCGATGCTCACTGGTTCGGTCGGAATGATGCCAATATCAAGGTCATAGTT
CCTTCTATATATGTACCCATATCTGGAGATTCCACAGCCAGAAAATCGTT
TGGAGTAGGTGACTTTTTGGCCGTCCGCATTGAGGAATCCAACTCACAGG
TGCTGAAGGGCACGCCCCTCGAGCTGAGCAACATAACCGACTTTCACAGC
AGACAGTTAATACAATAAAAGCTTTCTAGACCAT
BS11719.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6345-RA | 1752 | CG6345-PA | 1..1752 | 17..1768 | 8745 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6345-RA | 1829 | CG6345-RA | 62..1816 | 16..1770 | 8760 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10414231..10415985 | 1770..16 | 8760 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:22:50 has no hits.
BS11719.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:05 Download gff for
BS11719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6345-RA | 61..1810 | 17..1766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:50 Download gff for
BS11719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6345-RA | 63..1812 | 17..1766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:14:24 Download gff for
BS11719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6345-RA | 61..1810 | 17..1766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:14 Download gff for
BS11719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6345-RA | 63..1812 | 17..1766 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:14 Download gff for
BS11719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10414235..10415984 | 17..1766 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:50 Download gff for
BS11719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6239957..6241706 | 17..1766 | 99 | | Minus |
BS11719.pep Sequence
Translation from 16 to 1767
> BS11719.pep
MKISYRAFVRQVRHASTTASKGATTSVTSSAAGQLKSEPAARATFLERIQ
RGPGFQDFFAVKPASRLKTDEEEHVDTSVPYLNSIDFNGNGRKVHFEVYG
CQMNTNDTEVVFSILKENGYLRCQEPEEADVIMLVTCAVRDGAEQRIRNR
LKHLRAMKNKRSTRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSY
KDLPRLLAISRHYGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMRG
CDNMCTYCIVPFTRGRERSRPLASIVAEVKALAEQGVKEVTLLGQNVNSY
RDRTAQEEQDSLKATPVPGFSTVYKPKTGGTPFAALLRSVAQAVPDMRIR
FTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREA
YLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYL
FAYSMREKTTAHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQE
QLILIEGKSKRSDAHWFGRNDANIKVIVPSIYVPISGDSTARKSFGVGDF
LAVRIEESNSQVLKGTPLELSNITDFHSRQLIQ*
BS11719.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:52:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6345-PA | 583 | CG6345-PA | 1..583 | 1..583 | 2993 | 100 | Plus |
CG6550-PA | 552 | CG6550-PA | 42..472 | 62..529 | 339 | 23.2 | Plus |