Clone BS11719 Report

Search the DGRC for BS11719

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:117
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG6345-RA
Protein status:BS11719.pep: full length peptide match
Sequenced Size:1784

Clone Sequence Records

BS11719.complete Sequence

1784 bp assembled on 2009-12-07

GenBank Submission: KX801900

> BS11719.complete
GAAGTTATCAGTCGACATGAAAATAAGCTACCGGGCATTTGTTCGCCAAG
TGCGGCATGCCTCCACGACTGCCTCGAAAGGAGCTACGACATCCGTTACC
TCCAGCGCAGCGGGTCAACTAAAATCAGAGCCGGCAGCACGTGCAACTTT
TCTGGAGAGGATTCAACGCGGACCGGGCTTCCAAGACTTTTTTGCGGTCA
AGCCTGCGTCAAGACTGAAAACTGATGAAGAGGAGCATGTGGACACCAGT
GTGCCGTACCTGAACTCGATTGATTTCAATGGAAACGGAAGGAAGGTCCA
CTTTGAGGTCTACGGATGCCAGATGAACACGAATGACACGGAGGTGGTGT
TCAGTATCCTGAAGGAGAATGGTTATTTGAGATGCCAGGAGCCGGAGGAG
GCCGATGTCATAATGCTCGTAACGTGCGCAGTGCGCGATGGAGCGGAGCA
GAGGATCAGGAACCGATTGAAGCACCTGCGAGCCATGAAGAACAAACGCA
GTACGCGGAGGCATCCTCTACAGCTGACACTGCTGGGTTGCATGGCGGAG
CGACTAAAGGAGAAGCTGCTGGAACAGGAGCAATGTGTGGATGTAATCGC
CGGACCCGATAGCTACAAGGATTTGCCGCGACTACTGGCTATCTCCCGGC
ATTATGGCAACTCGGCCATCAATGTGCTCCTCTCGCTGGACGAAACCTAT
GCGGATGTGATGCCCGTTCGCTTAAACTCCGAATCGCCCACTGCTTTTGT
GTCCATCATGCGCGGTTGTGACAACATGTGTACCTATTGTATAGTGCCCT
TCACCCGTGGACGCGAGCGCTCTCGCCCCCTGGCATCCATTGTGGCTGAG
GTCAAGGCATTGGCGGAACAGGGCGTGAAGGAGGTCACCCTGCTGGGTCA
GAATGTCAACTCGTACAGAGACAGAACTGCGCAGGAGGAACAGGACTCAC
TGAAAGCAACTCCAGTGCCCGGTTTTAGCACTGTTTACAAGCCCAAAACA
GGCGGGACTCCCTTTGCAGCATTGCTCCGATCCGTGGCTCAAGCTGTTCC
AGACATGCGCATCCGTTTCACCTCGCCGCATCCGAAGGATTTCTCCGACG
AAGTTCTGGAGGTCATCAGAGATCACCCGAATGTGTGCAAGCAACTTCAC
CTGCCAGCACAATCGGGCAATACCCAAGTTCTGGAAAGGATGCGACGTGG
TTACAGCAGAGAGGCTTATCTGGAACTTGTGCAGCACATCAGACAGTTTT
TGCCCAACGTGGGTCTGTCCAGCGATTTTATCTGCGGCTTTTGCGGTGAA
ACGGAAGAGGAGTTCCAAGACACTGTATCTCTTATCCAACAAGTGCAGTA
CAACGTGGCCTACTTGTTCGCCTACAGCATGCGAGAAAAGACCACTGCCC
ATCGGCGCTACAAAGATGATGTGCCCATAAACGTGAAGAATGAGCGACTG
CAGCGCATGGTCCAGGTTTTCCGAGAGGGAGCTACACAGCTACATCGTAA
AATGGAAGGCCAGGAGCAGCTCATACTTATAGAAGGGAAAAGCAAGAGGT
CCGATGCTCACTGGTTCGGTCGGAATGATGCCAATATCAAGGTCATAGTT
CCTTCTATATATGTACCCATATCTGGAGATTCCACAGCCAGAAAATCGTT
TGGAGTAGGTGACTTTTTGGCCGTCCGCATTGAGGAATCCAACTCACAGG
TGCTGAAGGGCACGCCCCTCGAGCTGAGCAACATAACCGACTTTCACAGC
AGACAGTTAATACAATAAAAGCTTTCTAGACCAT

BS11719.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:22:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG6345-RA 1752 CG6345-PA 1..1752 17..1768 8745 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:22:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG6345-RA 1829 CG6345-RA 62..1816 16..1770 8760 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:22:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10414231..10415985 1770..16 8760 99.9 Minus
Blast to na_te.dros performed on 2014-11-28 02:22:50 has no hits.

BS11719.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:49:05 Download gff for BS11719.complete
Subject Subject Range Query Range Percent Splice Strand
CG6345-RA 61..1810 17..1766 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:50 Download gff for BS11719.complete
Subject Subject Range Query Range Percent Splice Strand
CG6345-RA 63..1812 17..1766 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:14:24 Download gff for BS11719.complete
Subject Subject Range Query Range Percent Splice Strand
CG6345-RA 61..1810 17..1766 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:10:14 Download gff for BS11719.complete
Subject Subject Range Query Range Percent Splice Strand
CG6345-RA 63..1812 17..1766 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:10:14 Download gff for BS11719.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10414235..10415984 17..1766 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:50 Download gff for BS11719.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6239957..6241706 17..1766 99   Minus

BS11719.pep Sequence

Translation from 16 to 1767

> BS11719.pep
MKISYRAFVRQVRHASTTASKGATTSVTSSAAGQLKSEPAARATFLERIQ
RGPGFQDFFAVKPASRLKTDEEEHVDTSVPYLNSIDFNGNGRKVHFEVYG
CQMNTNDTEVVFSILKENGYLRCQEPEEADVIMLVTCAVRDGAEQRIRNR
LKHLRAMKNKRSTRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSY
KDLPRLLAISRHYGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMRG
CDNMCTYCIVPFTRGRERSRPLASIVAEVKALAEQGVKEVTLLGQNVNSY
RDRTAQEEQDSLKATPVPGFSTVYKPKTGGTPFAALLRSVAQAVPDMRIR
FTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREA
YLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYL
FAYSMREKTTAHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQE
QLILIEGKSKRSDAHWFGRNDANIKVIVPSIYVPISGDSTARKSFGVGDF
LAVRIEESNSQVLKGTPLELSNITDFHSRQLIQ*

BS11719.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:52:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG6345-PA 583 CG6345-PA 1..583 1..583 2993 100 Plus
CG6550-PA 552 CG6550-PA 42..472 62..529 339 23.2 Plus