Clone Sequence Records
BS11725.3prime Sequence
492 bp (492 high quality bases) assembled on 2006-06-16
> BS11725.3prime
ATGGTCTAGAAAGCTTTCAATAATGGGTCTCGGTGATCCTGACCTTTCCG
TACTTTCCGTGCAGGGCGTGCTTGGCGAAGGACAGGAGGTTCGAGTGGCT
GTGGACATCGAAGTGGGCCGGGGTACTGTGATGCACCACGGCGGCGTGGG
TGTCATGGTGATGATGGTGCACCACCGGAGCGGAGTGCAGGCGAGCGTAG
TGGTAGTGAAGTGGCTCATGGTGGTACACTGTGGTTGGCAGCGACTCAAC
CAGGTGGTGATCCAAATGATGATCCAAATGATGGTTCAGATGGTGATCAT
CGTGCACCAAAGCGGCACTGTGTCCCAGATGGATGCCATCCGAATGATGG
ATCTCAGCGTCCAGCAGATGAGGCAGTTCCTCATGGTGGTAACCATGATG
GCTATCCACATGGGGCAGAAGACCTGGGGCAGCCTGGGCCACAGCCAGCA
CAGCCAAGATGCACACGAAGAACTTCATGTCGACTGATAACT
BS11725.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 20:01:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14147-PA | 462 | CG14147-RA | 1..462 | 478..17 | 2310 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:22:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14147-RA | 761 | CG14147-RA | 91..552 | 478..17 | 2310 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:22:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10972810..10973267 | 474..17 | 2290 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:22:14 has no hits.
BS11725.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:29:04 Download gff for
BS11725.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-PA | 1..462 | 17..478 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:05:18 Download gff for
BS11725.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-RA | 81..558 | 11..488 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:43:35 Download gff for
BS11725.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-RA | 81..558 | 11..488 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:43:35 Download gff for
BS11725.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10972806..10973273 | 11..478 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:05:18 Download gff for
BS11725.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10965906..10966373 | 11..478 | 99 | | Minus |
BS11725.5prime Sequence
492 bp (492 high quality bases) assembled on 2006-06-16
> BS11725.5prime
GAAGTTATCAGTCGACATGAAGTTCTTCGTGTGCATCTTGGCTGTGCTGG
CTGTGGCCCAGGCTGCCCCAGGTCTTCTGCCCCATGTGGATAGCCATCAT
GGTTACCACCATGAGGAACTGCCTCATCTGCTGGACGCTGAGATCCATCA
TTCGGATGGCATCCATCTGGGACACAGTGCCGCTTTGGTGCACGATGATC
ACCATCTGAACCATCATTTGGATCATCATTTGGATCACCACCTGGTTGAG
TCGCTGCCAACCACAGTGTACCACCATGAGCCACTTCACTACCACTACGC
TCGCCTGCACTCCGCTCCGGTGGTGCACCATCATCACCATGACACCCACG
CCGCCGTGGTGCATCACAGTACCCCGGCCCACTTCGATGTCCACAGCCAC
TCGAACCTCCTGTCCTTCGCCAAGCACGCCCTGCACGGAAAGTACGGAAA
GGTCAGGATCACCGAGACCCATTATTGAAAGCTTTCTAGACC
BS11725.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 20:01:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14147-PA | 462 | CG14147-RA | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:51:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14147-RA | 761 | CG14147-RA | 91..552 | 17..478 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:51:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10972810..10973267 | 21..478 | 2290 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:51:26 has no hits.
BS11725.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:29:04 Download gff for
BS11725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-PA | 1..462 | 17..478 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 22:33:32 Download gff for
BS11725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-RA | 81..558 | 7..484 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:43:56 Download gff for
BS11725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-RA | 81..558 | 7..484 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:43:56 Download gff for
BS11725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10972806..10973273 | 17..484 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 22:33:32 Download gff for
BS11725.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10965906..10966373 | 17..484 | 99 | | Plus |
BS11725.complete Sequence
494 bp assembled on 2007-10-17
GenBank Submission: FJ636942
> BS11725.complete
GAAGTTATCAGTCGACATGAAGTTCTTCGTGTGCATCTTGGCTGTGCTGG
CTGTGGCCCAGGCTGCCCCAGGTCTTCTGCCCCATGTGGATAGCCATCAT
GGTTACCACCATGAGGAACTGCCTCATCTGCTGGACGCTGAGATCCATCA
TTCGGATGGCATCCATCTGGGACACAGTGCCGCTTTGGTGCACGATGATC
ACCATCTGAACCATCATTTGGATCATCATTTGGATCACCACCTGGTTGAG
TCGCTGCCAACCACAGTGTACCACCATGAGCCACTTCACTACCACTACGC
TCGCCTGCACTCCGCTCCGGTGGTGCACCATCATCACCATGACACCCACG
CCGCCGTGGTGCATCACAGTACCCCGGCCCACTTCGATGTCCACAGCCAC
TCGAACCTCCTGTCCTTCGCCAAGCACGCCCTGCACGGAAAGTACGGAAA
GGTCAGGATCACCGAGACCCATTATTGAAAGCTTTCTAGACCAT
BS11725.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:16:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14147-RA | 462 | CG14147-PA | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:16:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14147-RA | 761 | CG14147-RA | 91..552 | 17..478 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:16:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10972810..10973267 | 21..478 | 2290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:16:49 has no hits.
BS11725.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:14:15 Download gff for
BS11725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-RA | 1..462 | 17..478 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:45:05 Download gff for
BS11725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-RA | 75..552 | 7..484 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:44 Download gff for
BS11725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-RA | 91..551 | 17..477 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:30:01 Download gff for
BS11725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-RA | 85..545 | 17..477 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:00 Download gff for
BS11725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14147-RA | 91..551 | 17..477 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:15:00 Download gff for
BS11725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10972806..10973266 | 17..477 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:44 Download gff for
BS11725.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10965906..10966366 | 17..477 | 99 | | Plus |
BS11725.pep Sequence
Translation from 16 to 477
> BS11725.pep
MKFFVCILAVLAVAQAAPGLLPHVDSHHGYHHEELPHLLDAEIHHSDGIH
LGHSAALVHDDHHLNHHLDHHLDHHLVESLPTTVYHHEPLHYHYARLHSA
PVVHHHHHDTHAAVVHHSTPAHFDVHSHSNLLSFAKHALHGKYGKVRITE
THY*
BS11725.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:32:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14147-PA | 153 | CG14147-PA | 1..153 | 1..153 | 870 | 100 | Plus |