BS11734.complete Sequence
1417 bp assembled on 2006-11-01
GenBank Submission: FJ636947
> BS11734.complete
GAAGTTATCAGTCGACATGGAAGCCATCTGCTCCTCCTTGGAGCCGCTGT
TTCCCTGTCGGGAGGCGGCCATTGAAACGCTGGGCGAGCTGATAGGAGAT
TCGAGTGAGACATATCCCTCGGCAATTTACCTATTCGGACACAGTGGAAC
CGGCAAAACAGCTCTGACCAGAGCTTTCCTCAAAGAATGTGGAAAACGGC
AAAATGTCCGCACAGCGCATTTAAATGCCATCGAATGCTACACCACCAAG
ATAATGCTGGAGATCCTGTTAGACTCGCTGGCACCCGATCAAGGTGATGC
GCTGAAGGTCGACAACATGCTGGACTTTGTGGAGCAGCTGCGTCGGCAGG
CCGCTACACGCGTGGAGGATCAGGGATTTCTCATAGCCGTGGATAACGCG
GAAAGGCTGCGCGACATGGATGCCAATGTGTTGCCCGTTCTTCTCCGACT
GCAGGAGCTGACCAACCTGAATCTGTGCGTTATTCTGCTCTCCCAGCTGC
CCTTTGAGAAGTTCTACAACAAGACCGGACTTAGTGAAATCGTCTGCCTG
CACTTGGCGCAGTACAACAAGGCGGAGACACAGCGCATCCTGGGATCTGA
CTTTCAGCAGGTGCGAAATCAACTGCTGGAACAGTTCGCCCAGGATAAGA
AGCGTCTGGAGATTTGCCAGGAAGCCGTAACTGAAGACTTCTACAACAAC
TATCTGAATCTCTTTCTGAGCGTCTTTTACAAAGCCTGTCGCGATGTTCC
AGAGCTCCAGCTGACCGCCAGGAAGTGTCTGTCCACATACTTGGAGCCTG
TACTCGACGGCACTGTGGATGCCACGGACATCTCCCGGCTTTGGCGGCAT
ATAGCTGGACCACTGCGTTCCGCCTTAACCCAGATTTATATGCGAATTGA
AAAACCCGCGGAAGAAGTTGAAGATTTCACCGCCATAGAAGATCAGAGCG
TTCGCAAGCTGGCGCAGTCGCTGGAGCTGCCCTACTATGCCAAATTTCTG
TTGATCGCTGCCTTCTTAGCCAGCCACAATGCCGCCAAGCAGGACAAGCG
ATTGTTCGTCAAGCACCATGGAAAACAGCGAAAGCGGATGCAGACGGTCA
ACGCCAGAGCCAAGACCACGGAGAAAATGTCCACCACTTTGGGACCCAAA
TCCTTTAGCATCGATCGTTTGCTGGCCATTTTCTACGCCATTCTAGAGGA
GAAAGTCGGTCTGACCTGCAACCTTCTCTCCCAGATCTCAACTTTGGTGC
ACCTCAATCTACTAAGCTTCGTCTCCGGCGAACAAAACATAATGGAAGGT
TCCGCTAGGCTGCAGTGCACCATTGGCTTGGAGTTTGTCCTGCAGATTGG
CAAGGTGGTGGGCTTTAATGTCCGCCAATATCTCTGCGACTTTATGTAGA
AGCTTTCTAGACCATTG
BS11734.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:10:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Orc5-RA | 1383 | CG7833-PA | 1..1383 | 17..1399 | 6915 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:10:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Orc5-RA | 1687 | CG7833-RA | 201..1583 | 17..1399 | 6915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:10:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13830037..13831134 | 17..1114 | 5490 | 100 | Plus |
| 2L | 23513712 | 2L | 13831186..13831472 | 1113..1399 | 1435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 11:10:31 has no hits.
BS11734.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:49:32 Download gff for
BS11734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc5-RA | 1..1383 | 17..1399 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:24:27 Download gff for
BS11734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc5-RA | 342..1734 | 9..1404 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:28:58 Download gff for
BS11734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc5-RA | 201..1583 | 17..1399 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:49:33 Download gff for
BS11734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc5-RA | 342..1734 | 9..1404 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:40:29 Download gff for
BS11734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc5-RA | 201..1583 | 17..1399 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:40:29 Download gff for
BS11734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13830037..13831134 | 17..1114 | 100 | -> | Plus |
| 2L | 13831188..13831472 | 1115..1399 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:28:58 Download gff for
BS11734.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13830037..13831134 | 17..1114 | 100 | -> | Plus |
| arm_2L | 13831188..13831472 | 1115..1399 | 100 | | Plus |
BS11734.pep Sequence
Translation from 16 to 1398
> BS11734.pep
MEAICSSLEPLFPCREAAIETLGELIGDSSETYPSAIYLFGHSGTGKTAL
TRAFLKECGKRQNVRTAHLNAIECYTTKIMLEILLDSLAPDQGDALKVDN
MLDFVEQLRRQAATRVEDQGFLIAVDNAERLRDMDANVLPVLLRLQELTN
LNLCVILLSQLPFEKFYNKTGLSEIVCLHLAQYNKAETQRILGSDFQQVR
NQLLEQFAQDKKRLEICQEAVTEDFYNNYLNLFLSVFYKACRDVPELQLT
ARKCLSTYLEPVLDGTVDATDISRLWRHIAGPLRSALTQIYMRIEKPAEE
VEDFTAIEDQSVRKLAQSLELPYYAKFLLIAAFLASHNAAKQDKRLFVKH
HGKQRKRMQTVNARAKTTEKMSTTLGPKSFSIDRLLAIFYAILEEKVGLT
CNLLSQISTLVHLNLLSFVSGEQNIMEGSARLQCTIGLEFVLQIGKVVGF
NVRQYLCDFM*
BS11734.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:26:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Orc5-PA | 460 | CG7833-PA | 1..460 | 1..460 | 2332 | 100 | Plus |
