BS11739.complete Sequence
1526 bp assembled on 2006-11-01
GenBank Submission: FJ636949
> BS11739.complete
GAAGTTATCAGTCGACATGGCGGCGATAAAGAACATCACCCTGGGCATTC
TGTACGGCCTGTGGGACAGCATACGTGGCATGACACTGGTCCTGCACATC
GACGACGAGGTGAACCGCCAGAATGCCGAGCAGGAGCACCGCCAACAGCT
GCGTCGCACCGACAAGGATCGTTACGAACGCGCCAGGAGATCACCGTCAC
CAGTGCCCAGTTCCGCGGCTGCCATGATTCGGGAGGAGTATGCCAAGCAG
GCGGAGGAGAACGCCGACGAGCGGACGCTAGAGAAGATCCTGGGCAAGAA
GCCAGCCGCCCAGGATCAACACCCGCAGGGGGAGAAGAAGATCGCCAAGA
AGCTGTTCAAGTGCTGCATGCTCAATGGCGGTTTCACCTGGCTGAGCATC
GTCCTGTTCGAGAACGCTCTGCTGCCCACGCTCAAATTCTGCCTTACCAT
CTTCTATGGAGCCCATTCCGAGACCCTGCCGGTGGTTTGGGGCTGGCTGC
ATCCCATACTGTCCCTGCTCTTCGGCATGATGTGGGTGCTGCCCATATTC
ATGCTCTCCAAGATTGTGAGCTCTCTGTGGTTCGCGGACATAGCCAATGC
CGCGTATCGCGTGAGAAAGGGTCGCCCGCAGCTAATCCCTGGAATTAGCA
AACTGGTGGCCGACTTCCTATTCAGCATGGTGGTGCAAATGCTGTTCCTG
GTACAGAGCATGCTGGTTAACCTAGTGCCTGTGAAATATGTGGGCTCCTC
GCTGTGCTTCGTGCATCTGTGCCTGCTCTACTCACTGTACTCCTTCGAGT
ACAAGTGGTTCAACATGGGCTGGGAGCTACATAGACGACTCACGTACATT
GAAAAGAACTGGCCCTATTTCTTCGGCTTCGGAATACCGCTCACCGTGCT
GACAAATCTGTCCAGCTCGGTGATCGTCAGTAGCTGCATCTTCTCCATCT
TTTTTCCCCTGTTCATACTCAGCGGCAATGAGGCAAAACCCATTGTGGAC
ACCACTGAGGTCTCCCTGCGTCTCTTCTCGCCGGTGGTCTTCATATCGAA
CCTCTGCTTCGGCGGCAATCCGTGGAGCAAGGCCAATCGACTGAGTGCCA
TGCAGCGGCAGCAGTATGAGCTGCAGCAGCGACAGCGTTTGCTCCAGCGG
GACGAGCAACTGCTCAAGCAGCGCAAGCAGCAATATGTGCAGCAGCAACG
GCTGCAACAGGAGCAGCTAATGCGACGTGATCGCTCGCATTCGCGATCAC
AGACACCGCAGCTGGGACATCCGCATCGCTACGCCCAGGCGCCCGTTTTC
GATGCGGGTCGGGTGCGCGATTCCTCCGCCTCGTCAACGCACAGCTCCAA
TGCGCCGAGCATTAATAGCCATCGGCCGCCGCCTTATTACGGCAGCTCGC
TGCGCGGAGCTGCGCCTTTGGTGCCCACTCCTGTGCCCGGTGCACCGAGA
GCTCCGCTAACCCCGCCCGTGATACGCCAGGAGTCGGGGCCCGATGACTG
GAACTTGTGAAAGCTTTCTAGACCAT
BS11739.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:59:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tank-RA | 1494 | CG15626-PA | 1..1494 | 17..1510 | 7470 | 100 | Plus |
| tank-RB | 1494 | CG15626-PB | 1..1494 | 17..1510 | 7470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:59:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tank-RA | 2077 | CG15626-RA | 175..1672 | 13..1510 | 7475 | 99.9 | Plus |
| tank-RB | 2213 | CG15626-RB | 311..1808 | 13..1510 | 7475 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:59:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4836483..4837158 | 1005..330 | 3380 | 100 | Minus |
| 2L | 23513712 | 2L | 4835740..4836248 | 1510..1002 | 2530 | 99.8 | Minus |
| 2L | 23513712 | 2L | 4837234..4837535 | 331..30 | 1510 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 01:59:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2499 | 1103..1277 | 245 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6746..6860 | 1103..1217 | 224 | 66.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6841 | 1102..1219 | 221 | 65.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6653..6966 | 975..1302 | 213 | 56.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6833 | 1109..1223 | 208 | 66.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1029..1163 | 1072..1214 | 173 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6680..6839 | 1133..1292 | 169 | 57.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6794 | 1152..1226 | 168 | 69.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2369..2523 | 1102..1257 | 166 | 59.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6812 | 1145..1223 | 163 | 69.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6814..6929 | 1102..1211 | 152 | 62.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2394 | 1141..1226 | 149 | 66.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2417..2532 | 1102..1217 | 139 | 57.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1515..1590 | 1151..1220 | 133 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2602..2669 | 1155..1222 | 115 | 63.2 | Plus |
BS11739.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:49:19 Download gff for
BS11739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15626-RA | 1..1494 | 17..1510 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:24:09 Download gff for
BS11739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15626-RA | 168..1674 | 9..1517 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:06:50 Download gff for
BS11739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15626-RB | 315..1807 | 17..1509 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:49:19 Download gff for
BS11739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15626-RA | 168..1674 | 9..1517 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:35:37 Download gff for
BS11739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tank-RB | 315..1807 | 17..1509 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:35:37 Download gff for
BS11739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4835741..4836244 | 1006..1509 | 100 | <- | Minus |
| 2L | 4836483..4837157 | 331..1005 | 100 | <- | Minus |
| 2L | 4837235..4837533 | 32..330 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:06:50 Download gff for
BS11739.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4835741..4836244 | 1006..1509 | 100 | <- | Minus |
| arm_2L | 4836483..4837157 | 331..1005 | 100 | <- | Minus |
| arm_2L | 4837235..4837533 | 32..330 | 100 | <- | Minus |
BS11739.pep Sequence
Translation from 16 to 1509
> BS11739.pep
MAAIKNITLGILYGLWDSIRGMTLVLHIDDEVNRQNAEQEHRQQLRRTDK
DRYERARRSPSPVPSSAAAMIREEYAKQAEENADERTLEKILGKKPAAQD
QHPQGEKKIAKKLFKCCMLNGGFTWLSIVLFENALLPTLKFCLTIFYGAH
SETLPVVWGWLHPILSLLFGMMWVLPIFMLSKIVSSLWFADIANAAYRVR
KGRPQLIPGISKLVADFLFSMVVQMLFLVQSMLVNLVPVKYVGSSLCFVH
LCLLYSLYSFEYKWFNMGWELHRRLTYIEKNWPYFFGFGIPLTVLTNLSS
SVIVSSCIFSIFFPLFILSGNEAKPIVDTTEVSLRLFSPVVFISNLCFGG
NPWSKANRLSAMQRQQYELQQRQRLLQRDEQLLKQRKQQYVQQQRLQQEQ
LMRRDRSHSRSQTPQLGHPHRYAQAPVFDAGRVRDSSASSTHSSNAPSIN
SHRPPPYYGSSLRGAAPLVPTPVPGAPRAPLTPPVIRQESGPDDWNL*
BS11739.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:27:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tank-PA | 497 | CG15626-PA | 1..497 | 1..497 | 2607 | 100 | Plus |
| tank-PB | 497 | CG15626-PB | 1..497 | 1..497 | 2607 | 100 | Plus |
