Clone BS11746 Report

Search the DGRC for BS11746

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:117
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG15021-RA
Protein status:BS11746.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS11746.complete Sequence

1295 bp assembled on 2006-11-01

GenBank Submission: FJ636953

> BS11746.complete
GAAGTTATCAGTCGACATGCGCTGTTTTCTGCCTCTGGTGGCCCTGCTCT
TGGCAGCGGGTGTCCACGCGGATGTCTCCCACCTGGACACAGATCTCCAG
GAGGATGGCTATCATTACAAGCAGCCGTCGGTGCCTTTTCCGCCTCCGGG
ATCGGGAAATGGCATTGAGGATTCGGGCATAGGCCCAGGACCTGCTCCCT
CGGCGCCGGCGCCGTCCTATGGGCCCCCGCAGACGCGTCCTCCTCCTCCT
CCTCCACCGCCACAGCCGACTCCACCAGCTCCTCGTCCTTCCTATGGACC
TCCTCAGACTCAGCCACCACGCCCTCCACCGCAGCCAACTCCTTCGGCTC
CTGCTCCGCCACCTCCATCCTATGGTCCTCCGCAGACGCCTCCACCACGT
CCTCCACCACAGCCAACTCCATCGGCTCCCGCTCCACCACCATCTTATGG
ACCGCCGCAGACACCACCACCTCGTCCTCCACCGCAGCCAACACCTTCGG
CTCCAGCTCCATCCTATGGACCTCCTCAGCCTCAGCCACCGGCACCACAG
CCACCATCGCCACCATCGCCACAACCTGGGCCAGAGTACCTGCCTCCAGA
TCAGCCAAAGCCACGTCCAACGCCCTCGCGTCCTCAGCCGCCTCCACCAC
CACCACCTAGGCCCCAGCCAACTCCTGGCTACGGACCACCACCGCCACCA
CCTCCGCCTAAGCCACAGCCTACTCCAGGATACGGCCCTCCTACACCACC
ACCAGGACCAGGACCCGCTCAGCCGGCACCACAGCCGCCAAGACCACAGC
CGCCACGCCCACAGCCACCACGGCCACAGCCAGGATCTGAGTATTTGCCA
CCTCCTGGAGAGAATGAGGTCACCCCGACACAACCGCAGCCAACTGCACC
AGTGCCGGAATACGGACCACCACCGCCTGCACCTCCCGCTGGACCCACAT
ACCAGCCACGCCCACCAGCACCACCAGCGCCTGCACCAGGACCTACTTAT
CAACCACGCCCACCAGCACCACCAGCGCCTGCACCAGGACCCACTTACCA
GCCACGCCCCCCGAGTCCTCCTGCACCACCGGCACCCACATATCAGCCAC
AACCTCCTGCACCACCTGCACCTGCTCCAGGACCCACCTATCAGCCACGT
CCGCCAGCACCACCTGCACCAACTCCGGAGTACGGACCACCACCACCCAC
CAGTGGTGGCGATGAGGCAGGCTCTCTGGGACCCGATGGCTACAACTACA
ACAAGCCTGCCAAACCCTTTACCTTCTAGAAGCTTTCTAGACCAT

BS11746.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG15021-RA 1263 CG15021-PA 1..1263 17..1279 6315 100 Plus
CG15021-RA 1263 CG15021-PA 270..420 364..511 360 84.1 Plus
CG15021-RA 1263 CG15021-PA 348..495 286..436 360 84.1 Plus
CG15021-RA 1263 CG15021-PA 900..995 964..1059 255 84.4 Plus
CG15021-RA 1263 CG15021-PA 199..341 368..510 250 78.3 Plus
CG15021-RA 1263 CG15021-PA 352..494 215..357 250 78.3 Plus
CG15021-RA 1263 CG15021-PA 927..1007 1084..1164 210 84 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG15021-RA 1536 CG15021-RA 162..1437 10..1285 6335 99.8 Plus
CG15021-RA 1536 CG15021-RA 438..588 364..511 360 84.1 Plus
CG15021-RA 1536 CG15021-RA 516..663 286..436 360 84.1 Plus
CG15021-RA 1536 CG15021-RA 1068..1163 964..1059 255 84.4 Plus
CG15021-RA 1536 CG15021-RA 367..509 368..510 250 78.3 Plus
CG15021-RA 1536 CG15021-RA 520..662 215..357 250 78.3 Plus
CG15021-RA 1536 CG15021-RA 1095..1175 1084..1164 210 84 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4436946..4438212 19..1285 6320 99.9 Plus
3L 28110227 3L 4437213..4437363 364..511 360 84.1 Plus
3L 28110227 3L 4437291..4437438 286..436 360 84.1 Plus
3L 28110227 3L 4437843..4437938 964..1059 255 84.4 Plus
3L 28110227 3L 4437142..4437284 368..510 250 78.3 Plus
3L 28110227 3L 4437295..4437437 215..357 250 78.3 Plus
3L 28110227 3L 4437870..4437950 1084..1164 210 84 Plus
Blast to na_te.dros performed on 2014-11-27 16:05:06 has no hits.

BS11746.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:49:22 Download gff for BS11746.complete
Subject Subject Range Query Range Percent Splice Strand
CG15021-RA 1..1263 17..1279 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:24:14 Download gff for BS11746.complete
Subject Subject Range Query Range Percent Splice Strand
CG15021-RA 155..1443 3..1295 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:48 Download gff for BS11746.complete
Subject Subject Range Query Range Percent Splice Strand
CG15021-RA 169..1431 17..1279 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:49:23 Download gff for BS11746.complete
Subject Subject Range Query Range Percent Splice Strand
CG15021-RA 155..1443 3..1295 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:10:05 Download gff for BS11746.complete
Subject Subject Range Query Range Percent Splice Strand
CG15021-RA 169..1431 17..1279 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:10:05 Download gff for BS11746.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4436945..4438206 17..1279 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:48 Download gff for BS11746.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4436945..4438206 17..1279 99   Plus

BS11746.pep Sequence

Translation from 16 to 1278

> BS11746.pep
MRCFLPLVALLLAAGVHADVSHLDTDLQEDGYHYKQPSVPFPPPGSGNGI
EDSGIGPGPAPSAPAPSYGPPQTRPPPPPPPPQPTPPAPRPSYGPPQTQP
PRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAPAPPPSYGPPQTP
PPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKPR
PTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGP
AQPAPQPPRPQPPRPQPPRPQPGSEYLPPPGENEVTPTQPQPTAPVPEYG
PPPPAPPAGPTYQPRPPAPPAPAPGPTYQPRPPAPPAPAPGPTYQPRPPS
PPAPPAPTYQPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPPPPTSGGDE
AGSLGPDGYNYNKPAKPFTF*

BS11746.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:27:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15021-PA 420 CG15021-PA 1..420 1..420 2503 100 Plus
CG13722-PB 708 CG13722-PB 137..644 29..418 613 35.9 Plus
CG13722-PB 708 CG13722-PB 223..708 29..420 599 36.6 Plus
CG13722-PB 708 CG13722-PB 94..548 31..418 592 36.6 Plus
CG13731-PB 792 CG13731-PB 1..509 1..395 590 35 Plus
CG13722-PB 708 CG13722-PB 37..493 30..418 563 36 Plus
CG13722-PB 708 CG13722-PB 342..692 4..357 504 37 Plus
CG13731-PB 792 CG13731-PB 139..651 57..396 499 33.2 Plus
CG13731-PB 792 CG13731-PB 207..664 34..392 488 34.3 Plus
CG13731-PB 792 CG13731-PB 341..792 62..420 487 35 Plus
Muc91C-PB 949 CG7709-PB 153..538 37..417 483 34.4 Plus
CG32241-PB 415 CG32241-PB 4..413 7..359 467 35 Plus
CG13722-PB 708 CG13722-PB 29..436 87..418 426 34.4 Plus
CG13731-PB 792 CG13731-PB 35..256 191..419 345 38.8 Plus
CG32241-PB 415 CG32241-PB 34..315 167..418 312 32.5 Plus