BS11746.complete Sequence
1295 bp assembled on 2006-11-01
GenBank Submission: FJ636953
> BS11746.complete
GAAGTTATCAGTCGACATGCGCTGTTTTCTGCCTCTGGTGGCCCTGCTCT
TGGCAGCGGGTGTCCACGCGGATGTCTCCCACCTGGACACAGATCTCCAG
GAGGATGGCTATCATTACAAGCAGCCGTCGGTGCCTTTTCCGCCTCCGGG
ATCGGGAAATGGCATTGAGGATTCGGGCATAGGCCCAGGACCTGCTCCCT
CGGCGCCGGCGCCGTCCTATGGGCCCCCGCAGACGCGTCCTCCTCCTCCT
CCTCCACCGCCACAGCCGACTCCACCAGCTCCTCGTCCTTCCTATGGACC
TCCTCAGACTCAGCCACCACGCCCTCCACCGCAGCCAACTCCTTCGGCTC
CTGCTCCGCCACCTCCATCCTATGGTCCTCCGCAGACGCCTCCACCACGT
CCTCCACCACAGCCAACTCCATCGGCTCCCGCTCCACCACCATCTTATGG
ACCGCCGCAGACACCACCACCTCGTCCTCCACCGCAGCCAACACCTTCGG
CTCCAGCTCCATCCTATGGACCTCCTCAGCCTCAGCCACCGGCACCACAG
CCACCATCGCCACCATCGCCACAACCTGGGCCAGAGTACCTGCCTCCAGA
TCAGCCAAAGCCACGTCCAACGCCCTCGCGTCCTCAGCCGCCTCCACCAC
CACCACCTAGGCCCCAGCCAACTCCTGGCTACGGACCACCACCGCCACCA
CCTCCGCCTAAGCCACAGCCTACTCCAGGATACGGCCCTCCTACACCACC
ACCAGGACCAGGACCCGCTCAGCCGGCACCACAGCCGCCAAGACCACAGC
CGCCACGCCCACAGCCACCACGGCCACAGCCAGGATCTGAGTATTTGCCA
CCTCCTGGAGAGAATGAGGTCACCCCGACACAACCGCAGCCAACTGCACC
AGTGCCGGAATACGGACCACCACCGCCTGCACCTCCCGCTGGACCCACAT
ACCAGCCACGCCCACCAGCACCACCAGCGCCTGCACCAGGACCTACTTAT
CAACCACGCCCACCAGCACCACCAGCGCCTGCACCAGGACCCACTTACCA
GCCACGCCCCCCGAGTCCTCCTGCACCACCGGCACCCACATATCAGCCAC
AACCTCCTGCACCACCTGCACCTGCTCCAGGACCCACCTATCAGCCACGT
CCGCCAGCACCACCTGCACCAACTCCGGAGTACGGACCACCACCACCCAC
CAGTGGTGGCGATGAGGCAGGCTCTCTGGGACCCGATGGCTACAACTACA
ACAAGCCTGCCAAACCCTTTACCTTCTAGAAGCTTTCTAGACCAT
BS11746.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:05:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15021-RA | 1263 | CG15021-PA | 1..1263 | 17..1279 | 6315 | 100 | Plus |
CG15021-RA | 1263 | CG15021-PA | 270..420 | 364..511 | 360 | 84.1 | Plus |
CG15021-RA | 1263 | CG15021-PA | 348..495 | 286..436 | 360 | 84.1 | Plus |
CG15021-RA | 1263 | CG15021-PA | 900..995 | 964..1059 | 255 | 84.4 | Plus |
CG15021-RA | 1263 | CG15021-PA | 199..341 | 368..510 | 250 | 78.3 | Plus |
CG15021-RA | 1263 | CG15021-PA | 352..494 | 215..357 | 250 | 78.3 | Plus |
CG15021-RA | 1263 | CG15021-PA | 927..1007 | 1084..1164 | 210 | 84 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15021-RA | 1536 | CG15021-RA | 162..1437 | 10..1285 | 6335 | 99.8 | Plus |
CG15021-RA | 1536 | CG15021-RA | 438..588 | 364..511 | 360 | 84.1 | Plus |
CG15021-RA | 1536 | CG15021-RA | 516..663 | 286..436 | 360 | 84.1 | Plus |
CG15021-RA | 1536 | CG15021-RA | 1068..1163 | 964..1059 | 255 | 84.4 | Plus |
CG15021-RA | 1536 | CG15021-RA | 367..509 | 368..510 | 250 | 78.3 | Plus |
CG15021-RA | 1536 | CG15021-RA | 520..662 | 215..357 | 250 | 78.3 | Plus |
CG15021-RA | 1536 | CG15021-RA | 1095..1175 | 1084..1164 | 210 | 84 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4436946..4438212 | 19..1285 | 6320 | 99.9 | Plus |
3L | 28110227 | 3L | 4437213..4437363 | 364..511 | 360 | 84.1 | Plus |
3L | 28110227 | 3L | 4437291..4437438 | 286..436 | 360 | 84.1 | Plus |
3L | 28110227 | 3L | 4437843..4437938 | 964..1059 | 255 | 84.4 | Plus |
3L | 28110227 | 3L | 4437142..4437284 | 368..510 | 250 | 78.3 | Plus |
3L | 28110227 | 3L | 4437295..4437437 | 215..357 | 250 | 78.3 | Plus |
3L | 28110227 | 3L | 4437870..4437950 | 1084..1164 | 210 | 84 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:05:06 has no hits.
BS11746.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:49:22 Download gff for
BS11746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15021-RA | 1..1263 | 17..1279 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:24:14 Download gff for
BS11746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15021-RA | 155..1443 | 3..1295 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:48 Download gff for
BS11746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15021-RA | 169..1431 | 17..1279 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:49:23 Download gff for
BS11746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15021-RA | 155..1443 | 3..1295 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:10:05 Download gff for
BS11746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15021-RA | 169..1431 | 17..1279 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:10:05 Download gff for
BS11746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4436945..4438206 | 17..1279 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:48 Download gff for
BS11746.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4436945..4438206 | 17..1279 | 99 | | Plus |
BS11746.pep Sequence
Translation from 16 to 1278
> BS11746.pep
MRCFLPLVALLLAAGVHADVSHLDTDLQEDGYHYKQPSVPFPPPGSGNGI
EDSGIGPGPAPSAPAPSYGPPQTRPPPPPPPPQPTPPAPRPSYGPPQTQP
PRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAPAPPPSYGPPQTP
PPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKPR
PTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGP
AQPAPQPPRPQPPRPQPPRPQPGSEYLPPPGENEVTPTQPQPTAPVPEYG
PPPPAPPAGPTYQPRPPAPPAPAPGPTYQPRPPAPPAPAPGPTYQPRPPS
PPAPPAPTYQPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPPPPTSGGDE
AGSLGPDGYNYNKPAKPFTF*
BS11746.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:27:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15021-PA | 420 | CG15021-PA | 1..420 | 1..420 | 2503 | 100 | Plus |
CG13722-PB | 708 | CG13722-PB | 137..644 | 29..418 | 613 | 35.9 | Plus |
CG13722-PB | 708 | CG13722-PB | 223..708 | 29..420 | 599 | 36.6 | Plus |
CG13722-PB | 708 | CG13722-PB | 94..548 | 31..418 | 592 | 36.6 | Plus |
CG13731-PB | 792 | CG13731-PB | 1..509 | 1..395 | 590 | 35 | Plus |
CG13722-PB | 708 | CG13722-PB | 37..493 | 30..418 | 563 | 36 | Plus |
CG13722-PB | 708 | CG13722-PB | 342..692 | 4..357 | 504 | 37 | Plus |
CG13731-PB | 792 | CG13731-PB | 139..651 | 57..396 | 499 | 33.2 | Plus |
CG13731-PB | 792 | CG13731-PB | 207..664 | 34..392 | 488 | 34.3 | Plus |
CG13731-PB | 792 | CG13731-PB | 341..792 | 62..420 | 487 | 35 | Plus |
Muc91C-PB | 949 | CG7709-PB | 153..538 | 37..417 | 483 | 34.4 | Plus |
CG32241-PB | 415 | CG32241-PB | 4..413 | 7..359 | 467 | 35 | Plus |
CG13722-PB | 708 | CG13722-PB | 29..436 | 87..418 | 426 | 34.4 | Plus |
CG13731-PB | 792 | CG13731-PB | 35..256 | 191..419 | 345 | 38.8 | Plus |
CG32241-PB | 415 | CG32241-PB | 34..315 | 167..418 | 312 | 32.5 | Plus |