BS11749.complete Sequence
1259 bp assembled on 2006-11-01
GenBank Submission: FJ636956
> BS11749.complete
GAAGTTATCAGTCGACATGAAGGCATTTCTTTGGGCATTGGTGATTTTAC
TGGGCTATATCCCGCAGAGTACAATCGCCAAGACTGTATCCACTGATTTT
TTAGATCTTCTCGACTTCAGCGATAATGATGAGTTTCAATGGGGGGAGTC
GGAGAATCAGGTATACGAAAATCGCACTGGGGAAAACCGCGTCGTAAGTT
TCCTGTCCCAACATCGCCTAAACAAGCGACAGGCTCCCACCTCGCAATTG
CTGGAGAACAAGGATTATGGAGCATGTAGCACTCCATTGGGTGAATCCGG
CCGATGTCGCCACATTATCTACTGTCGCATGCCAGAACTTAAGAATGATG
TCTGGCGTCTGGTCTCCCAGCTTTGCATCATTGAGAAAAGCTCCATAGGC
ATTTGCTGCACTGACCAGTCGACGAGCAACCGATTTAGTCCGCAAGTCGT
GACCAGTGCGGACGGTGATGAGCCGCGCATCGTTAATAAGCCGGAGCAGC
GAGGTTGTGGGATCACGTCCAGGCAGTTTCCCCGCCTCACCGGTGGACGG
CCAGCCGAGCCAGACGAGTGGCCTTGGATGGCGGCCCTGCTGCAGGAGGG
TCTGCCCTTCGTTTGGTGCGGTGGTGTCCTGATCACCGACCGTCATGTCC
TAACTGCCGCTCACTGCATCTACAAGAAGAACAAGGAGGACATCTTCGTG
CGTCTGGGCGAGTACAACACGCATATGCTGAATGAGACGAGGGCGAGGGA
TTTCCGGATTGCCAACATGGTGCTCCATATCGATTATAATCCACAGAACT
ACGACAATGATATTGCAATTGTCAGAATCGACAGGGCGACTATATTCAAC
ACCTACATCTGGCCAGTTTGCATGCCGCCCGTGAACGAAGATTGGTCGGA
TAGAAACGCCATTGTCACCGGTTGGGGCACCCAAAAGTTTGGCGGTCCTC
ATTCTAACATCCTCATGGAGGTTAACCTGCCGGTTTGGAAGCAGTCCGAT
TGCAGGTCGTCATTTGTACAGCACGTTCCGGACACTGCCATGTGCGCTGG
ATTTCCGGAAGGAGGTCAGGACTCCTGTCAAGGCGATAGCGGAGGTCCTC
TGTTGGTACAACTTCCCAACCAACGCTGGGTCACGATCGGCATCGTGTCC
TGGGGCGTCGGCTGCGGACAGCGGGGTCGCCCGGGTATCTACACTCGCGT
GGATCGCTACCTGGACTGGATTTTGGCTAATGCAGATGTCTAGAAGCTTT
CTAGACCAT
BS11749.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:23:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9372-RA | 1227 | CG9372-PA | 1..1227 | 17..1243 | 6135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:23:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9372-RA | 1693 | CG9372-RA | 374..1600 | 17..1243 | 6135 | 100 | Plus |
Lon-RC | 3761 | CG8798-RC | 3343..3617 | 1243..969 | 1375 | 100 | Minus |
Lon-RA | 3707 | CG8798-RA | 3289..3563 | 1243..969 | 1375 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:23:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19607244..19607827 | 389..972 | 2920 | 100 | Plus |
3L | 28110227 | 3L | 19608001..19608275 | 969..1243 | 1375 | 100 | Plus |
3L | 28110227 | 3L | 19606831..19606982 | 103..254 | 760 | 100 | Plus |
3L | 28110227 | 3L | 19607040..19607177 | 253..390 | 690 | 100 | Plus |
3L | 28110227 | 3L | 19606581..19606668 | 17..104 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:23:48 has no hits.
BS11749.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:49:25 Download gff for
BS11749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9372-RA | 1..1227 | 17..1243 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:24:18 Download gff for
BS11749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9372-RA | 362..1598 | 7..1243 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:56:37 Download gff for
BS11749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9372-RA | 374..1600 | 17..1243 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:49:25 Download gff for
BS11749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9372-RA | 362..1598 | 7..1243 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:59:44 Download gff for
BS11749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9372-RA | 374..1600 | 17..1243 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:59:44 Download gff for
BS11749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19606581..19606668 | 17..104 | 100 | -> | Plus |
3L | 19606833..19606981 | 105..253 | 100 | -> | Plus |
3L | 19607041..19607177 | 254..390 | 100 | -> | Plus |
3L | 19607246..19607825 | 391..970 | 100 | -> | Plus |
3L | 19608003..19608275 | 971..1243 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:56:37 Download gff for
BS11749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19599933..19600081 | 105..253 | 100 | -> | Plus |
arm_3L | 19600141..19600277 | 254..390 | 100 | -> | Plus |
arm_3L | 19601103..19601375 | 971..1243 | 100 | | Plus |
arm_3L | 19599681..19599768 | 17..104 | 100 | -> | Plus |
arm_3L | 19600346..19600925 | 391..970 | 100 | -> | Plus |
BS11749.pep Sequence
Translation from 16 to 1242
> BS11749.pep
MKAFLWALVILLGYIPQSTIAKTVSTDFLDLLDFSDNDEFQWGESENQVY
ENRTGENRVVSFLSQHRLNKRQAPTSQLLENKDYGACSTPLGESGRCRHI
IYCRMPELKNDVWRLVSQLCIIEKSSIGICCTDQSTSNRFSPQVVTSADG
DEPRIVNKPEQRGCGITSRQFPRLTGGRPAEPDEWPWMAALLQEGLPFVW
CGGVLITDRHVLTAAHCIYKKNKEDIFVRLGEYNTHMLNETRARDFRIAN
MVLHIDYNPQNYDNDIAIVRIDRATIFNTYIWPVCMPPVNEDWSDRNAIV
TGWGTQKFGGPHSNILMEVNLPVWKQSDCRSSFVQHVPDTAMCAGFPEGG
QDSCQGDSGGPLLVQLPNQRWVTIGIVSWGVGCGQRGRPGIYTRVDRYLD
WILANADV*
BS11749.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:26:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9372-PA | 408 | CG9372-PA | 1..408 | 1..408 | 2230 | 100 | Plus |
CG4386-PA | 372 | CG4386-PA | 118..354 | 164..402 | 544 | 44.8 | Plus |
CG11836-PI | 281 | CG11836-PI | 36..275 | 164..407 | 477 | 37 | Plus |
CG18735-PA | 364 | CG18735-PA | 82..314 | 173..405 | 475 | 40.7 | Plus |
CG1299-PB | 442 | CG1299-PB | 95..435 | 87..403 | 472 | 34.6 | Plus |