BS11750.complete Sequence
1436 bp assembled on 2006-11-01
GenBank Submission: FJ636957
> BS11750.complete
GAAGTTATCAGTCGACATGACACTTCTTGGGCCTAGCGCCCCAGGCATGG
CCTTTATGATGAAAAAGAAGAAGTACAAGTTCAACGTTGAAGTGCAGCTG
CAGGATTTGGTAGAGGTGGCCCTGGTCAATGAGGTGCTGTTCGCAAAGAT
ACGGTTGCTCGATGGAGGTTCCTTTCAGGAGTACAGTAGTCGCGAGGAAG
TGCGCAACCATCGAGTAGAATGGAACCGCAGCTTTGAGTTTCCTTGCAAG
ATGAGCGCGAATGCTTCAACCGGCGTTTTAGATCCTTGCCATCTGCGTAT
ATCAATACGCAAAGAAATGAAGGGCGGACGAAGTTACTATAAGCTTGGTT
TTATCGACCTCAATCTGGCCGAATTCGCCGGCGCCGGCCTCACCTCCCGT
CGGTTTCTCCTGGAGGGCTATGACTCAAGACACCGCCTAGACAACTCGAT
GTTGCGTGTGAGCATTAAGATGCATATGCTTAGCGGTGACATTCTGTTCA
AAGCACCCACGCCAAATCTAAAAAGCAAGCAGAGCAAGCCTTCAATAGAT
GATTTTTCAAATGCAGCCACTGGAGTCGGCCTGCAAATTCCAACGGCTAC
CGCATTGCCCAGTATAGGTGGCGGAAGCGGTGGCGCATCCGTTTCCTTGG
GCGGTAGTGGAGTCACTTTGGGCGGCATCCCCGGTAATCAGTCGTTACCC
GGAACCCGACCCGTTTCCACCACAAAGGAGGAGGATATCGATAACCAGGC
TTTGATAGCAGCTATTGTGACAGACTCCGGCTTGTCGGAGTCCTCGGAAT
CGGGGGTAACGTTGACTACGGATAATCTCCAGCAGCATGGCTCAGTCGTC
GTAGCTAATCCTATTAGTCCTGTGACGCAGGCGCTACCGCAACTGGGAAT
CATTGGCAGCAACAATTACGGAACAACAGGAGGGGCTATCGGATTTACTG
GCGCCGGCAACGCCACCCTCATAGAAATGGGTCATTCAAGAAATTCCAGT
AATACTAGTCAAATGTCAAAAGGTTCGGGTTACAGTAGTTTTTCGCACAG
TCAACATTCAAGGCAAAGTTCTGAGGGTGATTCGGGACATGCTAGGAATC
CCAGCTCCGGTTCGTTAGTTATTAGTGAGACGGGATCTCTAGATCGGACG
AAAAGCAGCGGTGAGAAGCGCAAAAAGGGCGCGCTCGATGACGGGCCACG
TGTTTCCGACCGAGTGGAGGAGACACGGGTCAATCCAGACTCATTAATTG
ATGAGATTTTAAAGGACACTAAACTTGATCAGCTGGAGGAATCCGCAGAA
ACCTCAGGCCTTCAACTGTACATCGCTCGCGATGGAACCGCCTCCCTGGG
CGGACATGAGGTTAAATCAAGCGTACGAGCGGGCGCCCTAAAGCAGGTGG
TAATGCAGGATAGAAGATAGAAGCTTTCTAGACCAT
BS11750.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:58:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8671-RB | 1404 | CG8671-PB | 1..1404 | 17..1420 | 7020 | 100 | Plus |
CG8671-RF | 2637 | CG8671-PF | 1..1079 | 17..1095 | 5395 | 100 | Plus |
CG8671-RE | 2604 | CG8671-PE | 1..1079 | 17..1095 | 5395 | 100 | Plus |
CG8671-RF | 2637 | CG8671-PF | 2311..2637 | 1094..1420 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8671-RB | 2431 | CG8671-RB | 505..1908 | 17..1420 | 7020 | 100 | Plus |
CG8671-RF | 3739 | CG8671-RF | 580..1658 | 17..1095 | 5395 | 100 | Plus |
CG8671-RE | 4183 | CG8671-RE | 580..1658 | 17..1095 | 5395 | 100 | Plus |
CG8671-RF | 3739 | CG8671-RF | 2890..3216 | 1094..1420 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21273827..21274139 | 192..504 | 1565 | 100 | Plus |
2L | 23513712 | 2L | 21275378..21275656 | 734..1012 | 1395 | 100 | Plus |
2L | 23513712 | 2L | 21274200..21274429 | 505..734 | 1150 | 100 | Plus |
2L | 23513712 | 2L | 21281130..21281337 | 1094..1301 | 1040 | 100 | Plus |
2L | 23513712 | 2L | 21273596..21273771 | 17..192 | 880 | 100 | Plus |
2L | 23513712 | 2L | 21281396..21281514 | 1302..1420 | 595 | 100 | Plus |
2L | 23513712 | 2L | 21275724..21275807 | 1013..1096 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:58:54 has no hits.
BS11750.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:49:10 Download gff for
BS11750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8671-RB | 1..1404 | 17..1420 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:23:59 Download gff for
BS11750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8671-RB | 500..1916 | 17..1433 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:40:49 Download gff for
BS11750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8671-RB | 505..1908 | 17..1420 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:49:10 Download gff for
BS11750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8671-RB | 500..1916 | 17..1433 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:15:24 Download gff for
BS11750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8671-RB | 505..1908 | 17..1420 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:15:24 Download gff for
BS11750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21273596..21273771 | 17..192 | 100 | -> | Plus |
2L | 21273828..21274139 | 193..504 | 100 | -> | Plus |
2L | 21274200..21274429 | 505..734 | 100 | -> | Plus |
2L | 21275379..21275656 | 735..1012 | 100 | -> | Plus |
2L | 21275724..21275806 | 1013..1095 | 100 | -> | Plus |
2L | 21281132..21281337 | 1096..1301 | 100 | -> | Plus |
2L | 21281396..21281514 | 1302..1420 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:40:49 Download gff for
BS11750.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21273596..21273771 | 17..192 | 100 | -> | Plus |
arm_2L | 21273828..21274139 | 193..504 | 100 | -> | Plus |
arm_2L | 21274200..21274429 | 505..734 | 100 | -> | Plus |
arm_2L | 21275379..21275656 | 735..1012 | 100 | -> | Plus |
arm_2L | 21275724..21275806 | 1013..1095 | 100 | -> | Plus |
arm_2L | 21281132..21281337 | 1096..1301 | 100 | -> | Plus |
arm_2L | 21281396..21281514 | 1302..1420 | 100 | | Plus |
BS11750.pep Sequence
Translation from 16 to 1419
> BS11750.pep
MTLLGPSAPGMAFMMKKKKYKFNVEVQLQDLVEVALVNEVLFAKIRLLDG
GSFQEYSSREEVRNHRVEWNRSFEFPCKMSANASTGVLDPCHLRISIRKE
MKGGRSYYKLGFIDLNLAEFAGAGLTSRRFLLEGYDSRHRLDNSMLRVSI
KMHMLSGDILFKAPTPNLKSKQSKPSIDDFSNAATGVGLQIPTATALPSI
GGGSGGASVSLGGSGVTLGGIPGNQSLPGTRPVSTTKEEDIDNQALIAAI
VTDSGLSESSESGVTLTTDNLQQHGSVVVANPISPVTQALPQLGIIGSNN
YGTTGGAIGFTGAGNATLIEMGHSRNSSNTSQMSKGSGYSSFSHSQHSRQ
SSEGDSGHARNPSSGSLVISETGSLDRTKSSGEKRKKGALDDGPRVSDRV
EETRVNPDSLIDEILKDTKLDQLEESAETSGLQLYIARDGTASLGGHEVK
SSVRAGALKQVVMQDRR*
BS11750.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:27:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8671-PB | 467 | CG8671-PB | 1..467 | 1..467 | 2355 | 100 | Plus |
CG8671-PD | 655 | CG8671-PD | 1..361 | 1..361 | 1836 | 100 | Plus |
CG8671-PE | 867 | CG8671-PE | 1..360 | 1..360 | 1830 | 100 | Plus |
CG8671-PC | 851 | CG8671-PC | 1..359 | 1..359 | 1825 | 100 | Plus |
CG8671-PF | 878 | CG8671-PF | 1..359 | 1..359 | 1825 | 100 | Plus |
CG8671-PE | 867 | CG8671-PE | 760..867 | 360..467 | 530 | 100 | Plus |
CG8671-PC | 851 | CG8671-PC | 744..851 | 360..467 | 530 | 100 | Plus |
CG8671-PD | 655 | CG8671-PD | 549..655 | 361..467 | 525 | 100 | Plus |