Clone BS11750 Report

Search the DGRC for BS11750

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:117
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG8671-RB
Protein status:BS11750.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS11750.complete Sequence

1436 bp assembled on 2006-11-01

GenBank Submission: FJ636957

> BS11750.complete
GAAGTTATCAGTCGACATGACACTTCTTGGGCCTAGCGCCCCAGGCATGG
CCTTTATGATGAAAAAGAAGAAGTACAAGTTCAACGTTGAAGTGCAGCTG
CAGGATTTGGTAGAGGTGGCCCTGGTCAATGAGGTGCTGTTCGCAAAGAT
ACGGTTGCTCGATGGAGGTTCCTTTCAGGAGTACAGTAGTCGCGAGGAAG
TGCGCAACCATCGAGTAGAATGGAACCGCAGCTTTGAGTTTCCTTGCAAG
ATGAGCGCGAATGCTTCAACCGGCGTTTTAGATCCTTGCCATCTGCGTAT
ATCAATACGCAAAGAAATGAAGGGCGGACGAAGTTACTATAAGCTTGGTT
TTATCGACCTCAATCTGGCCGAATTCGCCGGCGCCGGCCTCACCTCCCGT
CGGTTTCTCCTGGAGGGCTATGACTCAAGACACCGCCTAGACAACTCGAT
GTTGCGTGTGAGCATTAAGATGCATATGCTTAGCGGTGACATTCTGTTCA
AAGCACCCACGCCAAATCTAAAAAGCAAGCAGAGCAAGCCTTCAATAGAT
GATTTTTCAAATGCAGCCACTGGAGTCGGCCTGCAAATTCCAACGGCTAC
CGCATTGCCCAGTATAGGTGGCGGAAGCGGTGGCGCATCCGTTTCCTTGG
GCGGTAGTGGAGTCACTTTGGGCGGCATCCCCGGTAATCAGTCGTTACCC
GGAACCCGACCCGTTTCCACCACAAAGGAGGAGGATATCGATAACCAGGC
TTTGATAGCAGCTATTGTGACAGACTCCGGCTTGTCGGAGTCCTCGGAAT
CGGGGGTAACGTTGACTACGGATAATCTCCAGCAGCATGGCTCAGTCGTC
GTAGCTAATCCTATTAGTCCTGTGACGCAGGCGCTACCGCAACTGGGAAT
CATTGGCAGCAACAATTACGGAACAACAGGAGGGGCTATCGGATTTACTG
GCGCCGGCAACGCCACCCTCATAGAAATGGGTCATTCAAGAAATTCCAGT
AATACTAGTCAAATGTCAAAAGGTTCGGGTTACAGTAGTTTTTCGCACAG
TCAACATTCAAGGCAAAGTTCTGAGGGTGATTCGGGACATGCTAGGAATC
CCAGCTCCGGTTCGTTAGTTATTAGTGAGACGGGATCTCTAGATCGGACG
AAAAGCAGCGGTGAGAAGCGCAAAAAGGGCGCGCTCGATGACGGGCCACG
TGTTTCCGACCGAGTGGAGGAGACACGGGTCAATCCAGACTCATTAATTG
ATGAGATTTTAAAGGACACTAAACTTGATCAGCTGGAGGAATCCGCAGAA
ACCTCAGGCCTTCAACTGTACATCGCTCGCGATGGAACCGCCTCCCTGGG
CGGACATGAGGTTAAATCAAGCGTACGAGCGGGCGCCCTAAAGCAGGTGG
TAATGCAGGATAGAAGATAGAAGCTTTCTAGACCAT

BS11750.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:58:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG8671-RB 1404 CG8671-PB 1..1404 17..1420 7020 100 Plus
CG8671-RF 2637 CG8671-PF 1..1079 17..1095 5395 100 Plus
CG8671-RE 2604 CG8671-PE 1..1079 17..1095 5395 100 Plus
CG8671-RF 2637 CG8671-PF 2311..2637 1094..1420 1635 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG8671-RB 2431 CG8671-RB 505..1908 17..1420 7020 100 Plus
CG8671-RF 3739 CG8671-RF 580..1658 17..1095 5395 100 Plus
CG8671-RE 4183 CG8671-RE 580..1658 17..1095 5395 100 Plus
CG8671-RF 3739 CG8671-RF 2890..3216 1094..1420 1635 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21273827..21274139 192..504 1565 100 Plus
2L 23513712 2L 21275378..21275656 734..1012 1395 100 Plus
2L 23513712 2L 21274200..21274429 505..734 1150 100 Plus
2L 23513712 2L 21281130..21281337 1094..1301 1040 100 Plus
2L 23513712 2L 21273596..21273771 17..192 880 100 Plus
2L 23513712 2L 21281396..21281514 1302..1420 595 100 Plus
2L 23513712 2L 21275724..21275807 1013..1096 420 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:58:54 has no hits.

BS11750.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:49:10 Download gff for BS11750.complete
Subject Subject Range Query Range Percent Splice Strand
CG8671-RB 1..1404 17..1420 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:23:59 Download gff for BS11750.complete
Subject Subject Range Query Range Percent Splice Strand
CG8671-RB 500..1916 17..1433 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:40:49 Download gff for BS11750.complete
Subject Subject Range Query Range Percent Splice Strand
CG8671-RB 505..1908 17..1420 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:49:10 Download gff for BS11750.complete
Subject Subject Range Query Range Percent Splice Strand
CG8671-RB 500..1916 17..1433 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:15:24 Download gff for BS11750.complete
Subject Subject Range Query Range Percent Splice Strand
CG8671-RB 505..1908 17..1420 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:15:24 Download gff for BS11750.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21273596..21273771 17..192 100 -> Plus
2L 21273828..21274139 193..504 100 -> Plus
2L 21274200..21274429 505..734 100 -> Plus
2L 21275379..21275656 735..1012 100 -> Plus
2L 21275724..21275806 1013..1095 100 -> Plus
2L 21281132..21281337 1096..1301 100 -> Plus
2L 21281396..21281514 1302..1420 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:40:49 Download gff for BS11750.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21273596..21273771 17..192 100 -> Plus
arm_2L 21273828..21274139 193..504 100 -> Plus
arm_2L 21274200..21274429 505..734 100 -> Plus
arm_2L 21275379..21275656 735..1012 100 -> Plus
arm_2L 21275724..21275806 1013..1095 100 -> Plus
arm_2L 21281132..21281337 1096..1301 100 -> Plus
arm_2L 21281396..21281514 1302..1420 100   Plus

BS11750.pep Sequence

Translation from 16 to 1419

> BS11750.pep
MTLLGPSAPGMAFMMKKKKYKFNVEVQLQDLVEVALVNEVLFAKIRLLDG
GSFQEYSSREEVRNHRVEWNRSFEFPCKMSANASTGVLDPCHLRISIRKE
MKGGRSYYKLGFIDLNLAEFAGAGLTSRRFLLEGYDSRHRLDNSMLRVSI
KMHMLSGDILFKAPTPNLKSKQSKPSIDDFSNAATGVGLQIPTATALPSI
GGGSGGASVSLGGSGVTLGGIPGNQSLPGTRPVSTTKEEDIDNQALIAAI
VTDSGLSESSESGVTLTTDNLQQHGSVVVANPISPVTQALPQLGIIGSNN
YGTTGGAIGFTGAGNATLIEMGHSRNSSNTSQMSKGSGYSSFSHSQHSRQ
SSEGDSGHARNPSSGSLVISETGSLDRTKSSGEKRKKGALDDGPRVSDRV
EETRVNPDSLIDEILKDTKLDQLEESAETSGLQLYIARDGTASLGGHEVK
SSVRAGALKQVVMQDRR*

BS11750.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG8671-PB 467 CG8671-PB 1..467 1..467 2355 100 Plus
CG8671-PD 655 CG8671-PD 1..361 1..361 1836 100 Plus
CG8671-PE 867 CG8671-PE 1..360 1..360 1830 100 Plus
CG8671-PC 851 CG8671-PC 1..359 1..359 1825 100 Plus
CG8671-PF 878 CG8671-PF 1..359 1..359 1825 100 Plus
CG8671-PE 867 CG8671-PE 760..867 360..467 530 100 Plus
CG8671-PC 851 CG8671-PC 744..851 360..467 530 100 Plus
CG8671-PD 655 CG8671-PD 549..655 361..467 525 100 Plus