Clone BS11751 Report

Search the DGRC for BS11751

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:117
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptsmp-30-RA
Protein status:BS11751.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS11751.3prime Sequence

880 bp (740 high quality bases) assembled on 2006-06-16

> BS11751.3prime
ATGGTCTAGAAAGCTTCTAGATCTTCAAATTAACGCCGGCGTAACCCTTG
GCATTGAGCCCAGTGACCTGGAAGGTGGTACCAGCTGGTTTTGGCTGGTC
GAACTTGTTGGCGGTTGTCACATACAAAATATCCAAATTGGGACCTCCAA
AAGCCACCGAGGTGATTTGGGTGGTTGGAATTTTGATCTCCAGCAGAATT
TTACCGGTGCTTGGATTGACCTTGAAGACGGTGCCACCATTGAAGGTGGC
CACGTAGATATTGCCATCGGTGTCTACGGTCATGCCATCAGGGAACAATG
GTCCTTCGGGCCGAATCTTCCTCAGATCGAAGATGACCTTTGGGTTGCTT
ACGGCGCCGGTGCTCTGATTGTAGTCATAGGCCAATACCTCGTGGTTGTT
GGTGTCGATGAAGTAGAACTTCTTGGCCTTGACATCCCAGGCCAGGCCAT
TGGATATGCCCACCTTGCTACGGATAGCGTTGGGCTGTCCACCGGCCTGC
CAGCTGTAGAGCTCACCCTTCCATTGGGTGAATATGTCGCCACTGTCGGC
CATGGTGCCACCGTAAAAACGGCCATTGGGATCGGTTTTGGCATCATTAA
GGCGGTTTTCCTTCAGGTCCGGCTGCACCTCGAACAGGGTGCGAGTGACC
TTGGCCACTGCGGAGACTCCATCCCACTGGACGATGACCGTACGAAGACC
GCATCCTACGGCNAACTCCTGCGGTTTGTTCTCAACCGGCAGAATGAACG
ATGCAAATATCTCGCCCTCGATTTTAGCCCTGTACACTTTGTTCTGCTTT
GAATCATAACGATTATTGCCGGCGGATTCGAGGTCCACGTAGTACAGACT
CTGGCGAATCACATCCCAGTGGGGTCCCTC

BS11751.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:24:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG7390-PA 912 smp-30-RA 72..912 857..17 4111 99.5 Minus
CG7390-PB 912 smp-30-RB 72..912 857..17 4111 99.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:39:51
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-RD 1297 CG7390-RD 370..1234 880..16 4224 99.3 Minus
smp-30-RC 1102 CG7390-RC 175..1039 880..16 4224 99.3 Minus
smp-30-RB 1219 CG7390-RB 101..965 880..16 4224 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:39:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14746407..14747077 210..880 3254 99 Plus
3R 32079331 3R 14746155..14746350 16..211 980 100 Plus
Blast to na_te.dros performed on 2015-02-10 15:39:47 has no hits.

BS11751.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:29:12 Download gff for BS11751.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7390-PB 49..912 17..880 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:32:48 Download gff for BS11751.3prime
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 101..967 11..880 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:53:43 Download gff for BS11751.3prime
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 101..967 11..880 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:53:43 Download gff for BS11751.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 14746153..14746348 11..209 98 <- Plus
3R 14746407..14747077 210..880 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:32:48 Download gff for BS11751.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10571875..10572070 11..209 98 <- Plus
arm_3R 10572129..10572799 210..880 99   Plus

BS11751.5prime Sequence

892 bp (832 high quality bases) assembled on 2006-06-16

> BS11751.5prime
GAAGTTATCAGTCGACATGTCATACAAGGTTGAAGCTGTTCCCGATTCCT
ACGCCGCCCTGGGCGAGGGACCCCACTGGGATGTTGATCGCCAGAGTCTG
TACTACGTGGACCTCGAATCCGCCGGCATTAATCGTTATGATTTCAAGCA
GAACAAAGTGTACAGGGCTAAAATCGAGGGCGAGATATTTGCATCGTTCA
TTCTGCCGGTTGAGAACAAACCGCAGGAGTTTGCCGTAGGATGCGGTCTT
CGTACGGTCATCGTCCAGTGGGATGGAGTCTCCGCAGTGGCCAAGGTCAC
TCGCACCCTGTTCGAGGTGCAGCCGGACCTGAAGGAAAACCGCCTTAATG
ATGCCAAAACCGATCCCAATGGCCGTTTTTACGGTGGCACCATGGCCGAC
AGTGGCGACATATTCACCCAATGGAAGGGTGAGCTCTACAGCTGGCAGGC
CGGTGGACAGCCCAACGCTATCCGTAGCAAGGTGGGCATATCCAATGGCC
TGGCCTGGGATGTCAAGGCCAAGAAGTTCTACTTCATCGACACCAACAAC
CACGAGGTATTGGCCTATGACTACAATCAGAGCACCGGCGCCGTAAGCAA
CCCAAAGGTCATCTTCGATCTGAGGAAGATTCGGCCCGAAGGACCATTGT
TCCCTGATGGCATGACCGTAGACACCGATGGCAATATCTACGTGGCCACC
TTCAATGGTGGCACCGTCTTCAAGGTCAATCCAAGCACCGGTAAAATTCT
GCTGGAGATCAAAATTCCAACCACCCAAATCACCTCGGTGGCTTTTGGAG
GTCCCAATTTGGATATTTTGTATGTGACAACCGCCCACAAGTTCGACCAG
CCAAAACCAGCTGGTACCACCTTCCAGGTCACTGGGCTCAAT

BS11751.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:24:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG7390-PA 912 smp-30-RA 1..876 17..892 4355 99.8 Plus
CG7390-PB 912 smp-30-RB 1..876 17..892 4355 99.8 Plus
CG1803-PA 912 regucalcin-RA 25..68 41..84 145 93.1 Plus
CG1803-PC 912 regucalcin-RC 25..68 41..84 145 93.1 Plus
CG1803-PB 912 regucalcin-RB 25..68 41..84 145 93.1 Plus
CG1803-PD 960 regucalcin-RD 73..116 41..84 145 93.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 08:14:22
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-RD 1297 CG7390-RD 322..1197 17..892 4365 99.9 Plus
smp-30-RC 1102 CG7390-RC 127..1002 17..892 4365 99.9 Plus
smp-30-RB 1219 CG7390-RB 53..928 17..892 4365 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 08:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14746407..14747125 735..17 3595 100 Minus
3R 32079331 3R 14746192..14746350 892..734 780 99.4 Minus
X 23542271 X 12016003..12016718 17..732 475 71.1 Plus
Blast to na_te.dros performed on 2015-02-11 08:14:21 has no hits.

BS11751.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:29:12 Download gff for BS11751.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7390-PB 1..876 17..892 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 13:21:39 Download gff for BS11751.5prime
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 53..928 17..892 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:40:42 Download gff for BS11751.5prime
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 53..928 17..892 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:40:42 Download gff for BS11751.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 14746192..14746348 736..892 99 <- Minus
3R 14746407..14747129 12..735 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 13:21:39 Download gff for BS11751.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10571914..10572070 736..892 99 <- Minus
arm_3R 10572129..10572851 12..735 99   Minus

BS11751.complete Sequence

944 bp assembled on 2006-11-01

GenBank Submission: FJ636958

> BS11751.complete
GAAGTTATCAGTCGACATGTCATACAAGGTTGAAGCTGTTCCCGATTCCT
ACGCCGCCCTGGGCGAGGGACCCCACTGGGATGTTGATCGCCAGAGTCTG
TACTACGTGGACCTCGAATCCGCCGGCATTAATCGTTATGATTTCAAGCA
GAACAAAGTGTACAGGGCTAAAATCGAGGGCGAGATATTTGCATCGTTCA
TTCTGCCGGTTGAGAACAAACCGCAGGAGTTTGCCGTAGGATGCGGTCTT
CGTACGGTCATCGTCCAGTGGGATGGAGTCTCCGCAGTGGCCAAGGTCAC
TCGCACCCTGTTCGAGGTGCAGCCGGACCTGAAGGAAAACCGCCTTAATG
ATGCCAAAACCGATCCCAATGGCCGTTTTTACGGTGGCACCATGGCCGAC
AGTGGCGACATATTCACCCAATGGAAGGGTGAGCTCTACAGCTGGCAGGC
CGGTGGACAGCCCAACGCTATCCGTAGCAAGGTGGGCATATCCAATGGCC
TGGCCTGGGATGTCAAGGCCAAGAAGTTCTACTTCATCGACACCAACAAC
CACGAGGTATTGGCCTATGACTACAATCAGAGCACCGGCGCCGTAAGCAA
CCCAAAGGTCATCTTCGATCTGAGGAAGATTCGGCCCGAAGGACCATTGT
TCCCTGATGGCATGACCGTAGACACCGATGGCAATATCTACGTGGCCACC
TTCAATGGTGGCACCGTCTTCAAGGTCAATCCAAGCACCGGTAAAATTCT
GCTGGAGATCAAAATTCCAACCACCCAAATCACCTCGGTGGCTTTTGGAG
GTCCCAATTTGGATATTTTGTATGTGACAACCGCCAACAAGTTCGACCAG
CCAAAACCAGCTGGTACCACCTTCCAGGTCACTGGGCTCAATGCCAAGGG
TTACGCCGGCGTTAATTTGAAGATCTAGAAGCTTTCTAGACCAT

BS11751.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:04:32
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-RD 912 CG7390-PD 1..912 17..928 4560 100 Plus
smp-30-RC 921 CG7390-PC 10..921 17..928 4560 100 Plus
smp-30-RB 912 CG7390-PB 1..912 17..928 4560 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:04:33
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-RD 1297 CG7390-RD 322..1234 17..929 4565 100 Plus
smp-30-RC 1102 CG7390-RC 127..1039 17..929 4565 100 Plus
smp-30-RB 1219 CG7390-RB 53..965 17..929 4565 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:04:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14746407..14747125 735..17 3595 100 Minus
3R 32079331 3R 14746155..14746350 929..734 980 100 Minus
X 23542271 X 12016003..12016718 17..732 475 71.1 Plus
Blast to na_te.dros performed on 2014-11-27 14:04:32 has no hits.

BS11751.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:44:23 Download gff for BS11751.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 1..912 17..928 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:31:35 Download gff for BS11751.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 49..963 17..934 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:32:53 Download gff for BS11751.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 53..964 17..928 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:44:24 Download gff for BS11751.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 49..963 17..934 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:02:40 Download gff for BS11751.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RB 53..964 17..928 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:02:40 Download gff for BS11751.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14746156..14746348 736..928 100 <- Minus
3R 14746407..14747125 17..735 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:32:53 Download gff for BS11751.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10571878..10572070 736..928 100 <- Minus
arm_3R 10572129..10572847 17..735 100   Minus

BS11751.pep Sequence

Translation from 16 to 927

> BS11751.pep
MSYKVEAVPDSYAALGEGPHWDVDRQSLYYVDLESAGINRYDFKQNKVYR
AKIEGEIFASFILPVENKPQEFAVGCGLRTVIVQWDGVSAVAKVTRTLFE
VQPDLKENRLNDAKTDPNGRFYGGTMADSGDIFTQWKGELYSWQAGGQPN
AIRSKVGISNGLAWDVKAKKFYFIDTNNHEVLAYDYNQSTGAVSNPKVIF
DLRKIRPEGPLFPDGMTVDTDGNIYVATFNGGTVFKVNPSTGKILLEIKI
PTTQITSVAFGGPNLDILYVTTANKFDQPKPAGTTFQVTGLNAKGYAGVN
LKI*

BS11751.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:45:04
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-PD 303 CG7390-PD 1..303 1..303 1599 100 Plus
smp-30-PB 303 CG7390-PB 1..303 1..303 1599 100 Plus
smp-30-PA 303 CG7390-PA 1..303 1..303 1599 100 Plus
smp-30-PC 306 CG7390-PC 4..306 1..303 1599 100 Plus
regucalcin-PB 303 CG1803-PB 1..303 1..303 1173 71.9 Plus