BS11763.complete Sequence
1619 bp assembled on 2006-11-01
GenBank Submission: FJ636962
> BS11763.complete
GAAGTTATCAGTCGACATGCATTCTCTACGACTCCTGGTTCTTCTTGGTG
TTCTGATGGCCACTCAGGGCAGAGTTCTAGAACAGGACAAGGCTCCGGAG
GTTGTCGCTTCACCTCAAGAAATCAAACCCAACGTGGAGGTCAAGCAGGA
AGTTGCCAATAAAGTGCGGGAAACCCAGCCGCAGCTGGGTGGCGCTGTCA
TCTCCCAAGGCCAATCTTCTGCAGCTATCGATCAGGTTGGTGTGAAGGAG
GGTCAAGATCAGGTGGCGAACTCCACAACTCCTGATGTCCAGGAAAGCCA
ACGCGAAGGGGTTTCTTTCGTCGAAGTGACTAAAGAAAACCAGGAAGCAC
ATGCCCCACTGAGTAAGGTCGTCAGTAGCCCATTAGCCCCAGCGATAGCC
GAGGAAAAGCAGCCCACTTCCAATGAGATACCCAAGGACCAGGAGCCAGG
CAAAGAAGTTATAACCCAGAACCATCCCGACGTCCAAGGACGCGACAATA
AGATTCAGTTTGTGTACGAGCAGCCTGGTCAAAACCAAAACCAGATTCCA
CAGATAAGCATTCAGGATCTGGAGAAGATCTTCAAGTATCAGGGAGTGCA
AGTGGTCAACGGATCTCAATCATTTAACCAGTATCCGAGCATCTACAACA
AGTTCCCATCTTACCCGAAGGTGGAATACGTTTCTGTGGTAAACACATCG
GATGCCAATGTGACCCAGCATCTCCACAACCACACGCACTATTATCCCAA
CCAGAAGAAGCCCGGATTTCCCTTTCCCTTCCTGCCCAATCCCTTCGAGA
AACTGGAACCCGTTTATGTTAATCTTAATCAAACTACGAACTCCACGGGC
AACGTGACTTACCACACCCACATCCACGAGGAAATCAAGCCGTTCCCCTT
CCTGCCCAATCCCTTCACGGACTTCCCCAAGGTAGTGGGCCTCAGCTTGG
TGCTCCTCCCGAATCCATTCTATGTGAACAAGAACCAGGACATTAACCAG
TCTCAGGTCGTGAGCCTGCCTGCTGGATACCAGGACAACGGGGAGTACCA
GTACTTTGGAAAGTTCCGTGCTCTTTCCGAGGAAACCCAGAAGCAGCAGC
AGAAGCAGCAATCGCAGCAGCAGCCGGCTCAGAAGCCCAATTTCTACCTG
ATTCCCAATCCTCTGGCCAGTCAGGCATCCGGTGATGGTAAAAAGGTAGA
TGCCAATGTCCTGCTTCCAATAAATCTGGCTGCTCTCCCACTTCTGGTTC
CGGCTCCAGAGCTGACCCAGGGTAAAGCTTCGCCCTCGGGCAGCATCAGT
TTCCAGGATCTGATTAAGGCCACCAATGTCCATGTGAGCCAGCCCATCAA
GCTGCAGGCCAACAATGGCCTCACTCAAGTGCAGAAGGAGCAGGCTGCCA
TCCAACAGTTGATCCTCAGTCATCTTAGCGAGCAGCAGAAGCTGTTCCAA
AAGCAATCCGTTGCGGACGGAAAGCGCTCCCAATCCGCACAGCCCATTGT
CCAACTGCAGGAGGAGGAGGAGAGCTCCGTTCTGTTTGCCGTGGAGATTC
CGAAGCCCATCTATCGCTTCTTCAAGGGCATCTTTGGCGGTTTCTCCAAC
TGAAAGCTTTCTAGACCAT
BS11763.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:02:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12011-RA | 1587 | CG12011-PA | 1..1587 | 17..1603 | 7935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:02:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12011-RA | 1724 | CG12011-RA | 25..1612 | 16..1603 | 7940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:02:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1694716..1696300 | 19..1603 | 7925 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 17:02:55 has no hits.
BS11763.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:49:16 Download gff for
BS11763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12011-RA | 1..1587 | 17..1603 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:24:07 Download gff for
BS11763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12011-RA | 19..1621 | 8..1613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:38 Download gff for
BS11763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12011-RA | 26..1611 | 17..1602 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:49:16 Download gff for
BS11763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12011-RA | 19..1621 | 8..1613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:33:18 Download gff for
BS11763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12011-RA | 26..1611 | 17..1602 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:33:18 Download gff for
BS11763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1694715..1696299 | 17..1602 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:38 Download gff for
BS11763.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1694715..1696299 | 17..1602 | 99 | | Plus |
BS11763.pep Sequence
Translation from 16 to 1602
> BS11763.pep
MHSLRLLVLLGVLMATQGRVLEQDKAPEVVASPQEIKPNVEVKQEVANKV
RETQPQLGGAVISQGQSSAAIDQVGVKEGQDQVANSTTPDVQESQREGVS
FVEVTKENQEAHAPLSKVVSSPLAPAIAEEKQPTSNEIPKDQEPGKEVIT
QNHPDVQGRDNKIQFVYEQPGQNQNQIPQISIQDLEKIFKYQGVQVVNGS
QSFNQYPSIYNKFPSYPKVEYVSVVNTSDANVTQHLHNHTHYYPNQKKPG
FPFPFLPNPFEKLEPVYVNLNQTTNSTGNVTYHTHIHEEIKPFPFLPNPF
TDFPKVVGLSLVLLPNPFYVNKNQDINQSQVVSLPAGYQDNGEYQYFGKF
RALSEETQKQQQKQQSQQQPAQKPNFYLIPNPLASQASGDGKKVDANVLL
PINLAALPLLVPAPELTQGKASPSGSISFQDLIKATNVHVSQPIKLQANN
GLTQVQKEQAAIQQLILSHLSEQQKLFQKQSVADGKRSQSAQPIVQLQEE
EESSVLFAVEIPKPIYRFFKGIFGGFSN*
BS11763.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:27:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12011-PA | 528 | CG12011-PA | 1..528 | 1..528 | 2715 | 100 | Plus |
