BS11795.complete Sequence
1100 bp assembled on 2006-11-01
GenBank Submission: FJ636974
> BS11795.complete
GAAGTTATCAGTCGACATGAGCGAAGACAAGATGAACGGACGCTCCATTC
GCATCAACCGGCTGCCGGCCACCATTGTGGCCATCCTGCTGACCTTTGTC
CTGGTCTACTTCCTCAATTTCCATCAGGAGGAGCGGCCAGCGATCTACGG
CATGCTGCGCAGTGAGAATCCCAGCCGCGTCAATCTACGCAAGATGCTAA
TAGCCGCCATACAGGCCGCCCAGCGTGGCGGTCTCGAGGTACTGGACGTG
GCCCGGAGTCGCCAGCTGAAGGAGCGCAGCAAGGGCAAGACGGACGAGGG
CGTCAATGATCCCTTCACGGATGCCGACGGCCGGTCACATTGTGTGATGA
AGCAGGGCCTGCAGCGAATCTTTCCCCGCGTACAAATCTTCTCCGAGGAG
GACAAGGAGCACTGCAAGCAGGCACACGGCTATGATCTAGATCCAACGGT
CCTCCACGAGACCGCACAGATACCGGATGTGACCGTAAATGCCCAGGATG
TCACTGTTTGGGTAGATCCGTTGGATGCCACCAAGGAGTTCACCGAGGAG
CTATACGAGTACGTGACCACCATGGTGTGCGTGGCAGTGGCCGGAAGGCC
CATCATTGGCGTGATCCACAGCCCGTTCAATGGACAAACCGCGTGGGCGT
GGGTGGGCAACTCGATGTCTGAGTACCTATCCAATCTGCATCCGCAGCAT
TCGCCAAACAATCAGGCGCCCATCATTACAGTCTCGCGATCCCACACGGC
AGGTGCCAAGGATCTGGCGAGGGGCATCTTTGGCGAGAATGTCAGCCTGC
TGACGGCGGCGGGAGCTGGCTACAAGGTGCTCCAGGTGGTGGCCAACAAT
GCCACCGCCTATTTGCACACGTCGAAGATCAAGAAGTGGGACATTTGCGC
CGGCGATGCTATTCTGCACGCATTGGGCGGCACAATGACCACGCTGAACG
ATCAGTTGATTAACTACGGACCAGAGGAATCGCCAGTCAATACGGAGGGC
CTGCTGGCCACCTTGGAGCAGCATGACGAGTACATGGACAAGCTGTCCAA
ATATCGCGAGGCGCACAATGGCAAGCTGGCGTAGAAGCTTTCTAGACCAT
BS11795.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15743-RB | 1068 | CG15743-PB | 1..1068 | 17..1084 | 5340 | 100 | Plus |
| CG15743-RC | 1068 | CG15743-PC | 1..1068 | 17..1084 | 5340 | 100 | Plus |
| CG15743-RA | 1068 | CG15743-PA | 1..1068 | 17..1084 | 5340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:10:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15743-RB | 1450 | CG15743-RB | 136..1203 | 17..1084 | 5340 | 100 | Plus |
| CG15743-RC | 1959 | CG15743-RC | 645..1712 | 17..1084 | 5340 | 100 | Plus |
| CG15743-RA | 1650 | CG15743-RA | 336..1403 | 17..1084 | 5340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:10:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13286951..13287494 | 541..1084 | 2705 | 99.8 | Plus |
| X | 23542271 | X | 13286351..13286879 | 17..545 | 2645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:10:35 has no hits.
BS11795.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:48:57 Download gff for
BS11795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15743-RA | 1..1068 | 17..1084 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:23:38 Download gff for
BS11795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15743-RA | 322..1389 | 17..1084 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:40 Download gff for
BS11795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15743-RA | 336..1403 | 17..1084 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:48:57 Download gff for
BS11795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15743-RA | 322..1389 | 17..1084 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:01:35 Download gff for
BS11795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15743-RA | 336..1403 | 17..1084 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:01:35 Download gff for
BS11795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13286351..13286879 | 17..545 | 100 | -> | Plus |
| X | 13286956..13287494 | 546..1084 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:40 Download gff for
BS11795.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13180384..13180912 | 17..545 | 100 | -> | Plus |
| arm_X | 13180989..13181527 | 546..1084 | 100 | | Plus |
BS11795.pep Sequence
Translation from 16 to 1083
> BS11795.pep
MSEDKMNGRSIRINRLPATIVAILLTFVLVYFLNFHQEERPAIYGMLRSE
NPSRVNLRKMLIAAIQAAQRGGLEVLDVARSRQLKERSKGKTDEGVNDPF
TDADGRSHCVMKQGLQRIFPRVQIFSEEDKEHCKQAHGYDLDPTVLHETA
QIPDVTVNAQDVTVWVDPLDATKEFTEELYEYVTTMVCVAVAGRPIIGVI
HSPFNGQTAWAWVGNSMSEYLSNLHPQHSPNNQAPIITVSRSHTAGAKDL
ARGIFGENVSLLTAAGAGYKVLQVVANNATAYLHTSKIKKWDICAGDAIL
HALGGTMTTLNDQLINYGPEESPVNTEGLLATLEQHDEYMDKLSKYREAH
NGKLA*
BS11795.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:28:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15743-PB | 355 | CG15743-PB | 1..355 | 1..355 | 1846 | 100 | Plus |
| CG15743-PC | 355 | CG15743-PC | 1..355 | 1..355 | 1846 | 100 | Plus |
| CG15743-PA | 355 | CG15743-PA | 1..355 | 1..355 | 1846 | 100 | Plus |
| CG7789-PA | 306 | CG7789-PA | 8..295 | 57..343 | 360 | 33.1 | Plus |
