Clone Sequence Records
BS11863.3prime Sequence
729 bp (701 high quality bases) assembled on 2006-06-16
> BS11863.3prime
ATGGTCTAGAAAGCTTCTACTCCGCGTTTACTCCTTCTTGGGCCATGGAG
AGGTGATGGCCGAAGACCTTGGGATGCTGATTGAGCAGCTTGGAGGCGAA
TTGCACCATTTGCTCGAATGTGAACTCCGCCTTGGCACGTGGTCCCCAAA
GGAAGAAAGTCTTGGAATCATCGTAAGCACTTAGCTGTGAGCGTTCCCGC
TTCAGATATTGTTGCTTCACAAACGTCTCCTCGATCTGTTTGCGCAGATT
GGGGCCGAAGTAGCCATGTTCTTCGTCTGGATAGATGTTGAGCATCTCCA
GCATAACGTACAGTTTCGAGTCCTCGATGCGGTTGCCGCGCAGGAAGATG
TACATGAGAATAATATACAGCAGCGTGAACTGCGGCCGTTGAGCCGGCGT
CAGCTCGTGAATGGAGGCCACCGGCTCCTCCGCAGTGCAGATGAACGTCT
TGGTGGTCGCGTCCAGTGGGGTTAGTATTATACCGAATGTTTCGGCCAGC
AGATTAGTGACCAGCGGCAGGCGTTTCTTCAGTTCGCTCTTGTCCCCAGC
CACCGCTATCAAATCCTTGTCCTTTATGGGAATCTTCTGGGCGGTATGAT
CAAGGATGTAGTTTAGAATGGCGCGAACCTTGGCGTCGACCACATCGACG
GGTTGTTGCGCTTCCTGCGAGGGGATGGCATTCTGGCTCCTAGCTGCGCG
AGAAGTGCTAGCCATGTCGACTGATAACT
BS11863.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:25:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10059-PA | 699 | MAGE-RA | 1..699 | 715..17 | 3495 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MAGE-RA | 943 | CG10059-RA | 112..817 | 720..15 | 3515 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:53:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7154364..7155069 | 15..720 | 3515 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:53:30 has no hits.
BS11863.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:29:52 Download gff for
BS11863.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10059-PA | 1..699 | 17..715 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:07:43 Download gff for
BS11863.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 105..827 | 7..729 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:39:47 Download gff for
BS11863.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 105..827 | 7..729 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:39:47 Download gff for
BS11863.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7154354..7155075 | 7..729 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:07:43 Download gff for
BS11863.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2980076..2980797 | 7..729 | 98 | | Plus |
BS11863.5prime Sequence
729 bp (729 high quality bases) assembled on 2006-06-16
> BS11863.5prime
GAAGTTATCAGTCGACATGGCTAGCACTTCTCGCGCAGCTAGGAGCCAGA
ATGCCATCCCCTCGCAGGAAGCGCAACAACCCGTCGATGTGGTCGACGCC
AAGGTTCGCGCCATTCTAAACTACATCCTTGATCATACCGCCCAGAAGAT
TCCCATAAAGGACAAGGATTTGATAGCGGTGGCTGGGGACAAGAGCGAAC
TGAAGAAACGCCTGCCGCTGGTCACTAATCTGCTGGCCGAAACATTCGGT
ATAATACTAACCCCACTGGACGCGACCACCAAGACGTTCATCTGCACTGC
GGAGGAGCCGGTGGCCTCCATTCACGAGCTGACGCCGGCTCAACGGCCGC
AGTTCACGCTGCTGTATATTATTCTCATGTACATCTTCCTGCGCGGCAAC
CGCATCGAGGACTCGAAACTGTACGTTATGCTGGAGATGCTCAACATCTA
TCCAGACGAAGAACATGGCTACTTCGGCCCCAATCTGCGCAAACAGATCG
AGGAGACGTTTGTGAAGCAACAATATCTGAAGCGGGAACGCTCACAGCTA
AGTGCTTACGATGATTCCAAGACTTTCTTCCTTTGGGGACCACGTGCCAA
GGCGGAGTTCACATTCGAGCAAATGGTGCAATTCGCCTCCAAGCTGCTCA
ATCAGCATCCCAAGGTCTTCGGCCATCACCTCTCCATGGCCCAAGAAGGA
GTAAACGCGGAGTAGAAGCTTTCTAGACC
BS11863.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:25:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10059-PA | 699 | MAGE-RA | 1..699 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:05:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MAGE-RA | 943 | CG10059-RA | 112..817 | 12..717 | 3515 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7154364..7155069 | 717..12 | 3515 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-01-31 10:05:24 has no hits.
BS11863.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:29:52 Download gff for
BS11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10059-PA | 1..699 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:32:43 Download gff for
BS11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 104..827 | 2..725 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:42:23 Download gff for
BS11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 104..827 | 2..725 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:42:23 Download gff for
BS11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7154354..7155076 | 2..725 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:32:43 Download gff for
BS11863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2980076..2980798 | 2..725 | 98 | | Minus |
BS11863.complete Sequence
731 bp assembled on 2006-11-01
GenBank Submission: FJ637002
> BS11863.complete
GAAGTTATCAGTCGACATGGCTAGCACTTCTCGCGCAGCTAGGAGCCAGA
ATGCCATCCCCTCGCAGGAAGCGCAACAACCCGTCGATGTGGTCGACGCC
AAGGTTCGCGCCATTCTAAACTACATCCTTGATCATACCGCCCAGAAGAT
TCCCATAAAGGACAAGGATTTGATAGCGGTGGCTGGGGACAAGAGCGAAC
TGAAGAAACGCCTGCCGCTGGTCACTAATCTGCTGGCCGAAACATTCGGT
ATAATACTAACCCCACTGGACGCGACCACCAAGACGTTCATCTGCACTGC
GGAGGAGCCGGTGGCCTCCATTCACGAGCTGACGCCGGCTCAACGGCCGC
AGTTCACGCTGCTGTATATTATTCTCATGTACATCTTCCTGCGCGGCAAC
CGCATCGAGGACTCGAAACTGTACGTTATGCTGGAGATGCTCAACATCTA
TCCAGACGAAGAACATGGCTACTTCGGCCCCAATCTGCGCAAACAGATCG
AGGAGACGTTTGTGAAGCAACAATATCTGAAGCGGGAACGCTCACAGCTA
AGTGCTTACGATGATTCCAAGACTTTCTTCCTTTGGGGACCACGTGCCAA
GGCGGAGTTCACATTCGAGCAAATGGTGCAATTCGCCTCCAAGCTGCTCA
ATCAGCATCCCAAGGTCTTCGGCCATCACCTCTCCATGGCCCAAGAAGGA
GTAAACGCGGAGTAGAAGCTTTCTAGACCAT
BS11863.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MAGE-RA | 699 | CG10059-PA | 1..699 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:25:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MAGE-RA | 943 | CG10059-RA | 112..817 | 12..717 | 3515 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7154364..7155069 | 717..12 | 3515 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:25:13 has no hits.
BS11863.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:47:40 Download gff for
BS11863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 1..699 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:22:57 Download gff for
BS11863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 100..823 | 2..725 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:33 Download gff for
BS11863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 117..815 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:47:40 Download gff for
BS11863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 100..823 | 2..725 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:18:03 Download gff for
BS11863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 117..815 | 17..715 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:18:03 Download gff for
BS11863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7154366..7155064 | 17..715 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:33 Download gff for
BS11863.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2980088..2980786 | 17..715 | 100 | | Minus |
BS11863.pep Sequence
Translation from 16 to 714
> BS11863.pep
MASTSRAARSQNAIPSQEAQQPVDVVDAKVRAILNYILDHTAQKIPIKDK
DLIAVAGDKSELKKRLPLVTNLLAETFGIILTPLDATTKTFICTAEEPVA
SIHELTPAQRPQFTLLYIILMYIFLRGNRIEDSKLYVMLEMLNIYPDEEH
GYFGPNLRKQIEETFVKQQYLKRERSQLSAYDDSKTFFLWGPRAKAEFTF
EQMVQFASKLLNQHPKVFGHHLSMAQEGVNAE*
BS11863.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:30:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MAGE-PA | 232 | CG10059-PA | 1..232 | 1..232 | 1181 | 100 | Plus |
