BS11866.complete Sequence
1229 bp assembled on 2006-11-01
GenBank Submission: FJ637004
> BS11866.complete
GAAGTTATCAGTCGACATGGACACGCCACGCCGCAAGCTAAGAAATTTGC
ACCTGGAGAATGTCCAGAACAGCAGCACTCCCATCAACGTGCCGCCATCG
CCGATGATGAAGACCCTGGGCCACGGCACTGGGATCCGGGTCTACCGCTT
GGACCGCTCGCCTCGTCTCGGCGAAATCCGCTCGCCCTGGGCCGTCAAGC
GGATCACGCAGAACATGCGGGTCAAGAAGGATACACTCTTCAACGAGCGA
ATTGTTCACGAGGCCGATATCCTGCGCAAACTGAAGCATCCAAACATCGT
GGGATTCCGTGGCGTTATCACCAATGACGAGGGCATCAACACACTGGCAC
TTGAAATGTGCACCACTTCACTGGGCTCCATACTCGAGGAGCGACACGAC
GAGGATCTGGGCCCGTTGCCGGCCAAACATACCTATAAGATGATCATGGA
CGTGGCCCAGGCACTAGACTTTCTTCACAACGAAGCTCACCTCATGCACG
GCGACCTTAAGTCCTTTAATGTCCTGGTCAAAGGCGAGTTTGAGATTTGT
AAGCTGTGCGATTTTGGAGTCTCTCTTCCGCTGGACGAGCAGGGCGAGGT
TAATTTCCTAAAGAATCCCGGACTGCGCTATGTGGGAACTAACCTCTGGT
GCGCACCGGAGGTCATAGACGAAGTGGATGTTATTGACAGCAAGGCAGAC
ATATTCAGCTTTGGCCTGGTTATCTACGAAACCCTTGCTTTGGTGCCTCC
ACATACCTTGGAGCTTGATGCAGCACTGGGAGAGGATATGGACAGTTCGC
ACGATTTACCCACCGACACGGACAAGCTGCAGTGCAAACAGTTGGACTTC
TCCAGCGATGAAAACAAGAACGGACTACCTTCTGCAATGGAAGAACACAC
AGACAACGATATGAGTCAAGATTATGACGAGGAGGATGATGAGGAGGAGA
AGGAAGAGGAGGAGGAAGACGATGAAGAAGATGATGACACGAAGGAGAAC
GATATCTCTTACTTTACACTGAATAACCTTCATTCCGCCTATGGTACACG
ACCACCATTGCCAGTGGCCTTTCAACTTAGCGACGATTACAACTGCGTCG
TGGAGCTGTTTTATCTGTGCACAAATGCTCTCAGCGAGGATCGTCCAGCG
GCCAAGACCATTTGGCAGTGCCTGGAGAACAATGGCGCAAATGTTGCGAC
AGAAAGCGATTAGAAGCTTTCTAGACCAT
BS11866.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:56:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8173-RA | 1197 | CG8173-PA | 1..1197 | 17..1213 | 5985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:56:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8173-RA | 1643 | CG8173-RA | 213..1410 | 17..1214 | 5990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:56:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17707634..17708213 | 1214..635 | 2900 | 100 | Minus |
| X | 23542271 | X | 17708288..17708648 | 636..276 | 1805 | 100 | Minus |
| X | 23542271 | X | 17709182..17709441 | 276..17 | 1300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:56:44 has no hits.
BS11866.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:47:52 Download gff for
BS11866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8173-RA | 1..1197 | 17..1213 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:23:00 Download gff for
BS11866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8173-RA | 216..1417 | 13..1218 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:34:46 Download gff for
BS11866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8173-RA | 213..1409 | 17..1213 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:47:53 Download gff for
BS11866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8173-RA | 216..1417 | 13..1218 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:29:10 Download gff for
BS11866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8173-RA | 213..1409 | 17..1213 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:29:10 Download gff for
BS11866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17707635..17708212 | 636..1213 | 100 | <- | Minus |
| X | 17708289..17708647 | 277..635 | 100 | <- | Minus |
| X | 17709182..17709441 | 17..276 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:34:46 Download gff for
BS11866.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17601668..17602245 | 636..1213 | 100 | <- | Minus |
| arm_X | 17602322..17602680 | 277..635 | 100 | <- | Minus |
| arm_X | 17603215..17603474 | 17..276 | 100 | | Minus |
BS11866.pep Sequence
Translation from 16 to 1212
> BS11866.pep
MDTPRRKLRNLHLENVQNSSTPINVPPSPMMKTLGHGTGIRVYRLDRSPR
LGEIRSPWAVKRITQNMRVKKDTLFNERIVHEADILRKLKHPNIVGFRGV
ITNDEGINTLALEMCTTSLGSILEERHDEDLGPLPAKHTYKMIMDVAQAL
DFLHNEAHLMHGDLKSFNVLVKGEFEICKLCDFGVSLPLDEQGEVNFLKN
PGLRYVGTNLWCAPEVIDEVDVIDSKADIFSFGLVIYETLALVPPHTLEL
DAALGEDMDSSHDLPTDTDKLQCKQLDFSSDENKNGLPSAMEEHTDNDMS
QDYDEEDDEEEKEEEEEDDEEDDDTKENDISYFTLNNLHSAYGTRPPLPV
AFQLSDDYNCVVELFYLCTNALSEDRPAAKTIWQCLENNGANVATESD*
BS11866.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8173-PA | 398 | CG8173-PA | 1..398 | 1..398 | 2110 | 100 | Plus |
| Tao-PH | 611 | CG14217-PH | 30..224 | 31..246 | 180 | 28 | Plus |
| Tao-PJ | 615 | CG14217-PJ | 30..224 | 31..246 | 180 | 28 | Plus |
| Tao-PI | 1038 | CG14217-PI | 30..224 | 31..246 | 180 | 28 | Plus |
| Tao-PF | 1039 | CG14217-PF | 30..224 | 31..246 | 180 | 28 | Plus |
