Clone Sequence Records
BS11881.3prime Sequence
471 bp (471 high quality bases) assembled on 2006-06-16
> BS11881.3prime
ATGGTCTAGAAAGCTTTCAGGCGAAGACCTTACGCACCACGTGGCGGTTG
ATGGGCAGCCAGCAGGAGAAGACTCGGTTGGCCCAGGTGCAGACATCCGA
CTCGGCCTCGTTGTGGTCGATGCACTTCTCCAGGCCGTGCTGGACCGTGG
ACAGGTCTTTGCTGCTCTTGGAGGTGAACTGGGCGATCATGGCGCGCTCG
TCAAATCCCTTCTTCTCCGAGAACAGCTCAAGCTTCTCCAGGAAGCACTT
GACGAAGCAGCTGGTGCGCCGGTGGGCGGGAAACTCGTAGTTCAGGTACT
TCTCGTAGATGTCGTCCGGCACGTAGTAGTCCTCACGGCACTCCTCGAAC
GCCTTCTCTGCGTCGGCGTGGTCCTTCAGCAGGAACTTGGCCGTAGTCTG
GGCCACCAGAAACGTGGCAACGGCTGCAACGATCAGCAGGAGGGATTGGG
ACTGCATGTCGACTGATAACT
BS11881.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:26:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31558-PA | 441 | Obp83g-RA | 1..441 | 457..17 | 2205 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:40:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83g-RA | 569 | CG31558-RA | 57..497 | 457..17 | 2205 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:40:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6111743..6112126 | 17..400 | 1920 | 100 | Plus |
3R | 32079331 | 3R | 6112187..6112246 | 398..457 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:40:30 has no hits.
BS11881.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:29:59 Download gff for
BS11881.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31558-PA | 1..441 | 17..457 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:40:04 Download gff for
BS11881.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83g-RA | 49..500 | 12..464 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:47:51 Download gff for
BS11881.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83g-RA | 49..500 | 12..464 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:47:51 Download gff for
BS11881.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6111740..6112123 | 12..397 | 99 | <- | Plus |
3R | 6112187..6112254 | 398..464 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:40:04 Download gff for
BS11881.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1937462..1937845 | 12..397 | 99 | <- | Plus |
arm_3R | 1937909..1937976 | 398..464 | 95 | | Plus |
BS11881.5prime Sequence
471 bp (471 high quality bases) assembled on 2006-06-16
> BS11881.5prime
GAAGTTATCAGTCGACATGCAGTCCCAATCCCTCCTGCTGATCGTTGCAG
CCGTTGCCACGTTTCTGGTGGCCCAGACTACGGCCAAGTTCCTGCTGAAG
GACCACGCCGACGCAGAGAAGGCGTTCGAGGAGTGCCGTGAGGACTACTA
CGTGCCGGACGACATCTACGAGAAGTACCTGAACTACGAGTTTCCCGCCC
ACCGGCGCACCAGCTGCTTCGTCAAGTGCTTCCTGGAGAAGCTTGAGCTG
TTCTCGGAGAAGAAGGGATTTGACGAGCGCGCCATGATCGCCCAGTTCAC
CTCCAAGAGCAGCAAAGACCTGTCCACGGTCCAGCACGGCCTGGAGAAGT
GCATCGACCACAACGAGGCCGAGTCGGATGTCTGCACCTGGGCCAACCGA
GTCTTCTCCTGCTGGCTGCCCATCAACCGCCACGTGGTGCGTAAGGTCTT
CGCCTGAAAGCTTTCTAGACC
BS11881.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:26:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31558-PA | 441 | Obp83g-RA | 1..441 | 17..457 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:40:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83g-RA | 569 | CG31558-RA | 57..497 | 17..457 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:40:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6111743..6112126 | 457..74 | 1920 | 100 | Minus |
3R | 32079331 | 3R | 6112187..6112246 | 76..17 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 17:40:35 has no hits.
BS11881.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:30:00 Download gff for
BS11881.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31558-PA | 1..441 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:40:07 Download gff for
BS11881.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83g-RA | 49..500 | 10..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:48:13 Download gff for
BS11881.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83g-RA | 49..500 | 10..462 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:48:13 Download gff for
BS11881.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6111740..6112123 | 77..462 | 99 | <- | Minus |
3R | 6112187..6112254 | 10..76 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:40:07 Download gff for
BS11881.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1937462..1937845 | 77..462 | 99 | <- | Minus |
arm_3R | 1937909..1937976 | 10..76 | 95 | | Minus |
BS11881.complete Sequence
473 bp assembled on 2006-11-01
GenBank Submission: FJ637011
> BS11881.complete
GAAGTTATCAGTCGACATGCAGTCCCAATCCCTCCTGCTGATCGTTGCAG
CCGTTGCCACGTTTCTGGTGGCCCAGACTACGGCCAAGTTCCTGCTGAAG
GACCACGCCGACGCAGAGAAGGCGTTCGAGGAGTGCCGTGAGGACTACTA
CGTGCCGGACGACATCTACGAGAAGTACCTGAACTACGAGTTTCCCGCCC
ACCGGCGCACCAGCTGCTTCGTCAAGTGCTTCCTGGAGAAGCTTGAGCTG
TTCTCGGAGAAGAAGGGATTTGACGAGCGCGCCATGATCGCCCAGTTCAC
CTCCAAGAGCAGCAAAGACCTGTCCACGGTCCAGCACGGCCTGGAGAAGT
GCATCGACCACAACGAGGCCGAGTCGGATGTCTGCACCTGGGCCAACCGA
GTCTTCTCCTGCTGGCTGCCCATCAACCGCCACGTGGTGCGTAAGGTCTT
CGCCTGAAAGCTTTCTAGACCAT
BS11881.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:28:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83g-RA | 441 | CG31558-PA | 1..441 | 17..457 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:28:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83g-RA | 569 | CG31558-RA | 57..497 | 17..457 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:28:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6111743..6112126 | 457..74 | 1920 | 100 | Minus |
3R | 32079331 | 3R | 6112187..6112246 | 76..17 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:28:34 has no hits.
BS11881.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:47:31 Download gff for
BS11881.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83g-RA | 1..441 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:22:49 Download gff for
BS11881.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83g-RA | 44..495 | 10..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:52:57 Download gff for
BS11881.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83g-RA | 57..496 | 17..456 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:47:31 Download gff for
BS11881.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83g-RA | 44..495 | 10..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:21:09 Download gff for
BS11881.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp83g-RA | 57..496 | 17..456 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:21:09 Download gff for
BS11881.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6111744..6112123 | 77..456 | 100 | <- | Minus |
3R | 6112187..6112246 | 17..76 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:52:57 Download gff for
BS11881.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1937466..1937845 | 77..456 | 100 | <- | Minus |
arm_3R | 1937909..1937968 | 17..76 | 100 | | Minus |
BS11881.pep Sequence
Translation from 16 to 456
> BS11881.pep
MQSQSLLLIVAAVATFLVAQTTAKFLLKDHADAEKAFEECREDYYVPDDI
YEKYLNYEFPAHRRTSCFVKCFLEKLELFSEKKGFDERAMIAQFTSKSSK
DLSTVQHGLEKCIDHNEAESDVCTWANRVFSCWLPINRHVVRKVFA*
BS11881.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:30:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp83g-PA | 146 | CG31558-PA | 1..146 | 1..146 | 770 | 100 | Plus |
Obp99a-PB | 142 | CG18111-PB | 10..139 | 17..146 | 189 | 30 | Plus |
Obp99a-PA | 142 | CG18111-PA | 10..139 | 17..146 | 189 | 30 | Plus |
Obp44a-PB | 143 | CG2297-PB | 4..137 | 12..142 | 171 | 30.4 | Plus |
Obp44a-PA | 143 | CG2297-PA | 4..137 | 12..142 | 171 | 30.4 | Plus |