Clone Sequence Records
BS11893.3prime Sequence
480 bp (480 high quality bases) assembled on 2006-06-16
> BS11893.3prime
ATGGTCTAGAAAGCTTTCAGTGCCGTAAGAGCCATGTGAGAGTGAGGAGG
GCCGCTGCCACGCCCCATTCCAGTTCCAGCCTTCCAGCGGCATTGCAACC
GTCCGTATCACAAGTGTAAATGCAGCTGCGATAGTCCATGCGATCGCCCT
TGTTTCGCACATAGTCACAATAGTTGCCCATGTCCTTCGAACTGCAGAAC
CTCTTCGCCCCGATTCCACCCTCAAAACGACCCACGTGCTTCACACAGAA
CTGGGCGCCATGGACACTGGAACAATTTTGGGGTTGAATGTCCGGTATGT
CGTATCGCTCGAACCACTCGCCGCACTGGAACGGATGCTCCGTATCGCTC
GTGTCGCACACGTAGCACTCGATCCCCGATACCATTACCATTTGCAGGCT
CATCAGGAGAACGACGAGAGCAAGGCTTGAAAGCCAGCCAATGTGGGCGT
GCTTGGGCGGCCACATGTCGACTGATAACT
BS11893.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:26:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14430-PA | 450 | CG14430-RA | 1..450 | 466..17 | 2250 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:26:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bou-RA | 703 | CG14430-RA | 93..547 | 467..13 | 2260 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:26:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6986578..6987032 | 467..13 | 2260 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:26:33 has no hits.
BS11893.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:30:02 Download gff for
BS11893.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14430-PA | 1..450 | 17..466 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 10:21:37 Download gff for
BS11893.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bou-RA | 87..546 | 13..472 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:18:54 Download gff for
BS11893.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bou-RA | 88..547 | 13..472 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:18:54 Download gff for
BS11893.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6986573..6987032 | 13..472 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 10:21:37 Download gff for
BS11893.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6880606..6881065 | 13..472 | 99 | | Minus |
BS11893.5prime Sequence
480 bp (480 high quality bases) assembled on 2006-06-16
> BS11893.5prime
GAAGTTATCAGTCGACATGTGGCCGCCCAAGCACGCCCACATTGGCTGGC
TTTCAAGCCTTGCTCTCGTCGTTCTCCTGATGAGCCTGCAAATGGTAATG
GTATCGGGGATCGAGTGCTACGTGTGCGACACGAGCGATACGGAGCATCC
GTTCCAGTGCGGCGAGTGGTTCGAGCGATACGACATACCGGACATTCAAC
CCCAAAATTGTTCCAGTGTCCATGGCGCCCAGTTCTGTGTGAAGCACGTG
GGTCGTTTTGAGGGTGGAATCGGGGCGAAGAGGTTCTGCAGTTCGAAGGA
CATGGGCAACTATTGTGACTATGTGCGAAACAAGGGCGATCGCATGGACT
ATCGCAGCTGCATTTACACTTGTGATACGGACGGTTGCAATGCCGCTGGA
AGGCTGGAACTGGAATGGGGCGTGGCAGCGGCCCTCCTCACTCTCACATG
GCTCTTACGGCACTGAAAGCTTTCTAGACC
BS11893.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:26:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14430-PA | 450 | CG14430-RA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:32:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bou-RA | 703 | CG14430-RA | 93..547 | 16..470 | 2260 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:32:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6986578..6987032 | 16..470 | 2260 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:32:34 has no hits.
BS11893.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:30:02 Download gff for
BS11893.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14430-PA | 1..450 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:17:38 Download gff for
BS11893.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bou-RA | 87..546 | 11..470 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:02:46 Download gff for
BS11893.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bou-RA | 88..547 | 11..470 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:02:46 Download gff for
BS11893.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6986573..6987032 | 11..470 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:17:38 Download gff for
BS11893.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6880606..6881065 | 11..470 | 99 | | Plus |
BS11893.complete Sequence
482 bp assembled on 2006-11-01
GenBank Submission: FJ637014
> BS11893.complete
GAAGTTATCAGTCGACATGTGGCCGCCCAAGCACGCCCACATTGGCTGGC
TTTCAAGCCTTGCTCTCGTCGTTCTCCTGATGAGCCTGCAAATGGTAATG
GTATCGGGGATCGAGTGCTACGTGTGCGACACGAGCGATACGGAGCATCC
GTTCCAGTGCGGCGAGTGGTTCGAGCGATACGACATACCGGACATTCAAC
CCCAAAATTGTTCCAGTGTCCATGGCGCCCAGTTCTGTGTGAAGCACGTG
GGTCGTTTTGAGGGTGGAATCGGGGCGAAGAGGTTCTGCAGTTCGAAGGA
CATGGGCAACTATTGTGACTATGTGCGAAACAAGGGCGATCGCATGGACT
ATCGCAGCTGCATTTACACTTGTGATACGGACGGTTGCAATGCCGCTGGA
AGGCTGGAACTGGAATGGGGCGTGGCAGCGGCCCTCCTCACTCTCACATG
GCTCTTACGGCACTGAAAGCTTTCTAGACCAT
BS11893.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:33:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bou-RA | 450 | CG14430-PA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:33:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bou-RA | 703 | CG14430-RA | 93..547 | 16..470 | 2260 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:33:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6986578..6987032 | 16..470 | 2260 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:33:13 has no hits.
BS11893.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:44:18 Download gff for
BS11893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14430-RA | 1..450 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:11:04 Download gff for
BS11893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14430-RA | 84..543 | 11..470 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:11:40 Download gff for
BS11893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bou-RA | 93..541 | 17..465 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:44:18 Download gff for
BS11893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14430-RA | 84..543 | 11..470 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:21:48 Download gff for
BS11893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bou-RA | 94..542 | 17..465 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:21:48 Download gff for
BS11893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6986579..6987027 | 17..465 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:11:40 Download gff for
BS11893.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6880612..6881060 | 17..465 | 100 | | Plus |
BS11893.pep Sequence
Translation from 16 to 465
> BS11893.pep
MWPPKHAHIGWLSSLALVVLLMSLQMVMVSGIECYVCDTSDTEHPFQCGE
WFERYDIPDIQPQNCSSVHGAQFCVKHVGRFEGGIGAKRFCSSKDMGNYC
DYVRNKGDRMDYRSCIYTCDTDGCNAAGRLELEWGVAAALLTLTWLLRH*
BS11893.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:39:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bou-PA | 149 | CG14430-PA | 1..149 | 1..149 | 839 | 100 | Plus |