BS11895.complete Sequence
1097 bp assembled on 2006-11-01
GenBank Submission: FJ637016
> BS11895.complete
GAAGTTATCAGTCGACATGAGCCTGAAAGTTTTTCTAGTCCTAGCTTTGG
CTCTATCGTCCTGCCAAGCGCTTCCCTATGTATCCTATGATGATGTTGAC
GATACGGAGGTCATCGAGCTGCCTGGAAATGGAATCGAGGAGATACCACC
CACTCTTGGCAAGGATATCATCGACCTGACACCATTGGGAACGGCGCTCT
TTGGCAAACCGGATGAGGAGCTAACGGCGAATCGTGTGGGTAACTTTAGT
GCGGATGCAGATGAGATGAATCCTGAGGAACTGGGCAGCTATCTGGAGGG
TGATATGCTGGTGCCGCAAACGGATCTGATTATGAAAAATGGACTGCCCA
CTCAGTCCTCCCGTTGGCCAAATGGTGTGGTGCCATATGAAATCCGAGGA
AACTTCAATGCCAGAGATATGGCCACAATTGAAAATGCCATTGGTGAGTA
CCATCGTCGGACGTGCATTCGGTTTGTGAAGCGCAGCTCTGAGCGGGACT
ACATCTCCATTCGCGGCGACAACTCCGGCTGTTGGTCCTCCGTTGGTCGA
GTGGGTGGCAAGCAGGAGGTGAACCTACAGTCTCCCGGCTGTCTCAGCCG
TCCAGGAACCGCCATGCACGAGCTGATGCACGCCCTCGGCTTCCTTCATG
AACAGAACCGTATGGAGCGCGATGGTTATGTGGCCATCCAGTACAACAAT
GTCCAGTCCTCGGCGATGAACAACTTCGAAAAGGCCGCCCGCACGGAAGC
CTTTGGGGTGCCCTACGACTATGGCAGCGTGATGCACTACTCCAAGAACG
CCTTCTCCATCAACGGACAGCCCACCATACTGGCCATGCAAGCCAATGGC
GCCGATAAAATGGGCCAGAGGAATGGTTTCTCCGACTACGATATCCAGAA
GCTGAATCGTATGTACGATTGTGGCACCGTCAACGCTGTTCCAGTTGCCC
CAGGATTACCCGCCCCTGCTCCTGCTCCTGGCGCCCCTGCTGGCAGTGGC
AATCCGATTGTAGATAGCTTCATCGGCGGCCTGATCAGCGGATTGGGATT
GGGCGATGAAAAGAAGGAGACCAGTTCATAGAAGCTTTCTAGACCAT
BS11895.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:45:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6763-RB | 1065 | CG6763-PB | 1..1065 | 17..1081 | 5325 | 100 | Plus |
| CG6763-RA | 1065 | CG6763-PA | 1..1065 | 17..1081 | 5325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:45:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6763-RB | 1275 | CG6763-RB | 74..1139 | 17..1082 | 5330 | 100 | Plus |
| CG6763-RA | 1974 | CG6763-RA | 773..1838 | 17..1082 | 5330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:45:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23284774..23285595 | 17..838 | 4110 | 100 | Plus |
| 3R | 32079331 | 3R | 23285661..23285905 | 838..1082 | 1225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:45:51 has no hits.
BS11895.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:47:33 Download gff for
BS11895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6763-RA | 1..1065 | 17..1081 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:22:52 Download gff for
BS11895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6763-RA | 773..1847 | 17..1091 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:02 Download gff for
BS11895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6763-RA | 773..1837 | 17..1081 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:47:33 Download gff for
BS11895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6763-RA | 773..1847 | 17..1091 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:53 Download gff for
BS11895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6763-RA | 773..1837 | 17..1081 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:53 Download gff for
BS11895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23284774..23285595 | 17..838 | 100 | -> | Plus |
| 3R | 23285662..23285904 | 839..1081 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:02 Download gff for
BS11895.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19111384..19111626 | 839..1081 | 100 | | Plus |
| arm_3R | 19110496..19111317 | 17..838 | 100 | -> | Plus |
BS11895.pep Sequence
Translation from 16 to 1080
> BS11895.pep
MSLKVFLVLALALSSCQALPYVSYDDVDDTEVIELPGNGIEEIPPTLGKD
IIDLTPLGTALFGKPDEELTANRVGNFSADADEMNPEELGSYLEGDMLVP
QTDLIMKNGLPTQSSRWPNGVVPYEIRGNFNARDMATIENAIGEYHRRTC
IRFVKRSSERDYISIRGDNSGCWSSVGRVGGKQEVNLQSPGCLSRPGTAM
HELMHALGFLHEQNRMERDGYVAIQYNNVQSSAMNNFEKAARTEAFGVPY
DYGSVMHYSKNAFSINGQPTILAMQANGADKMGQRNGFSDYDIQKLNRMY
DCGTVNAVPVAPGLPAPAPAPGAPAGSGNPIVDSFIGGLISGLGLGDEKK
ETSS*
BS11895.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:30:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6763-PB | 354 | CG6763-PB | 1..354 | 1..354 | 1859 | 100 | Plus |
| CG6763-PA | 354 | CG6763-PA | 1..354 | 1..354 | 1859 | 100 | Plus |
| CG5715-PA | 295 | CG5715-PA | 33..293 | 49..302 | 722 | 54.2 | Plus |
| CG6696-PA | 324 | CG6696-PA | 66..290 | 76..301 | 459 | 43.9 | Plus |
| CG7631-PA | 254 | CG7631-PA | 23..250 | 77..302 | 408 | 40.3 | Plus |
