Clone Sequence Records
BS11904.3prime Sequence
699 bp (699 high quality bases) assembled on 2006-06-16
> BS11904.3prime
ATGGTCTAGAAAGCTTTCATGCTTCGAATGTGAAATTGGTCTTCTTGAAA
ATGGCCACCAACTGGCGGACGCCCTTGCCATTGGCTTCCTCGTAGTATGG
AAGCTGTTCCAGCTTTTTGATCCAAGCACCGATCCTGGGATACTTAGTCG
TATCCAAGGCCACGAAGGCCTCAAGGGAGGCCACCGATGAAACGAGACTG
AAATCCGCAATGGTCAGTTGATTGCCAGCAATGTAATCCTGTCCCTTGAG
AAAAGTTTCCACAAAATCGTAGATCTCGATAATGGCATCGTATCGCTCCT
TGGGTACTTTCGTCTGTCCCTGGAAGAGCACTGACTTCGATATGCTCCTT
ATGCCATTGGCAAAGACCACTCCGGATTCAAAGTGCAGCCGCTGATCCAC
AACAGCCCGCTTGAGAGGATCTTTCGGGTATAGGGCATCGGAATCGGCAT
ATTTCGAGACCAAATAGGCAATAATGGCATGCGAATCCCAGATGTAGTGA
CCGTCATCCTCCAGGGTGGGCACCGTATGCTGTGGATTCTTCTCCAGATA
TTCCGGTGAAAGTTGGGCACGAGCCACAATGTCAACGTTTACATATTCGT
AGGTTAGGTTTAGAGCGGCCAAAGTAAGCTTAACAGCGCGAACTGGGGGA
CTGGGGTCCAAACCGTATAAAGTCAATTTCACCATGTCGACTGATAACT
BS11904.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:26:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17530-PA | 669 | GstE6-RA | 1..669 | 685..17 | 3345 | 100 | Minus |
CG17527-PA | 669 | GstE5-RA | 145..254 | 541..432 | 175 | 86.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:50:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE6-RA | 751 | CG17530-RA | 32..700 | 685..17 | 3345 | 100 | Minus |
GstE5-RA | 734 | CG17527-RA | 28..685 | 687..30 | 800 | 75 | Minus |
GstE7-RA | 765 | CG17531-RA | 169..642 | 548..75 | 495 | 74.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:50:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18406042..18406710 | 685..17 | 3345 | 100 | Minus |
2R | 25286936 | 2R | 18404632..18405289 | 687..30 | 800 | 74.8 | Minus |
2R | 25286936 | 2R | 18407092..18407565 | 548..75 | 480 | 73.4 | Minus |
2R | 25286936 | 2R | 18408003..18408344 | 542..201 | 390 | 74.3 | Minus |
Blast to na_te.dros performed on 2015-02-12 03:50:43 has no hits.
BS11904.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:30:05 Download gff for
BS11904.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17530-PA | 1..669 | 17..685 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:30:40 Download gff for
BS11904.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..704 | 11..685 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:56:59 Download gff for
BS11904.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..704 | 11..685 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:56:59 Download gff for
BS11904.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18406042..18406714 | 11..685 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:30:40 Download gff for
BS11904.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14293547..14294219 | 11..685 | 99 | | Minus |
BS11904.5prime Sequence
699 bp (699 high quality bases) assembled on 2006-06-16
> BS11904.5prime
GAAGTTATCAGTCGACATGGTGAAATTGACTTTATACGGTTTGGACCCCA
GTCCCCCAGTTCGCGCTGTTAAGCTTACTTTGGCCGCTCTAAACCTAACC
TACGAATATGTAAACGTTGACATTGTGGCTCGTGCCCAACTTTCACCGGA
ATATCTGGAGAAGAATCCACAGCATACGGTGCCCACCCTGGAGGATGACG
GTCACTACATCTGGGATTCGCATGCCATTATTGCCTATTTGGTCTCGAAA
TATGCCGATTCCGATGCCCTATACCCGAAAGATCCTCTCAAGCGGGCTGT
TGTGGATCAGCGGCTGCACTTTGAATCCGGAGTGGTCTTTGCCAATGGCA
TAAGGAGCATATCGAAGTCAGTGCTCTTCCAGGGACAGACGAAAGTACCC
AAGGAGCGATACGATGCCATTATCGAGATCTACGATTTTGTGGAAACTTT
TCTCAAGGGACAGGATTACATTGCTGGCAATCAACTGACCATTGCGGATT
TCAGTCTCGTTTCATCGGTGGCCTCCCTTGAGGCCTTCGTGGCCTTGGAT
ACGACTAAGTATCCCAGGATCGGTGCTTGGATCAAAAAGCTGGAACAGCT
TCCATACTACGAGGAAGCCAATGGCAAGGGCGTCCGCCAGTTGGTGGCCA
TTTTCAAGAAGACCAATTTCACATTCGAAGCATGAAAGCTTTCTAGACC
BS11904.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:26:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17530-PA | 669 | GstE6-RA | 1..669 | 17..685 | 3345 | 100 | Plus |
CG17527-PA | 669 | GstE5-RA | 145..254 | 161..270 | 175 | 86.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:40:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE6-RA | 751 | CG17530-RA | 32..700 | 17..685 | 3345 | 100 | Plus |
GstE5-RA | 734 | CG17527-RA | 28..685 | 15..672 | 800 | 75 | Plus |
GstE7-RA | 765 | CG17531-RA | 169..642 | 154..627 | 495 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:40:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18406042..18406710 | 17..685 | 3345 | 100 | Plus |
2R | 25286936 | 2R | 18404632..18405289 | 15..672 | 800 | 74.8 | Plus |
2R | 25286936 | 2R | 18407092..18407565 | 154..627 | 480 | 73.4 | Plus |
2R | 25286936 | 2R | 18408003..18408344 | 160..501 | 390 | 74.3 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:40:53 has no hits.
BS11904.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:30:05 Download gff for
BS11904.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17530-PA | 1..669 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:40:14 Download gff for
BS11904.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..704 | 17..691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:49:27 Download gff for
BS11904.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..704 | 17..691 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:49:27 Download gff for
BS11904.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18406042..18406714 | 17..691 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:40:14 Download gff for
BS11904.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14293547..14294219 | 17..691 | 99 | | Plus |
BS11904.complete Sequence
701 bp assembled on 2006-11-01
GenBank Submission: FJ637018
> BS11904.complete
GAAGTTATCAGTCGACATGGTGAAATTGACTTTATACGGTTTGGACCCCA
GTCCCCCAGTTCGCGCTGTTAAGCTTACTTTGGCCGCTCTAAACCTAACC
TACGAATATGTAAACGTTGACATTGTGGCTCGTGCCCAACTTTCACCGGA
ATATCTGGAGAAGAATCCACAGCATACGGTGCCCACCCTGGAGGATGACG
GTCACTACATCTGGGATTCGCATGCCATTATTGCCTATTTGGTCTCGAAA
TATGCCGATTCCGATGCCCTATACCCGAAAGATCCTCTCAAGCGGGCTGT
TGTGGATCAGCGGCTGCACTTTGAATCCGGAGTGGTCTTTGCCAATGGCA
TAAGGAGCATATCGAAGTCAGTGCTCTTCCAGGGACAGACGAAAGTACCC
AAGGAGCGATACGATGCCATTATCGAGATCTACGATTTTGTGGAAACTTT
TCTCAAGGGACAGGATTACATTGCTGGCAATCAACTGACCATTGCGGATT
TCAGTCTCGTTTCATCGGTGGCCTCCCTTGAGGCCTTCGTGGCCTTGGAT
ACGACTAAGTATCCCAGGATCGGTGCTTGGATCAAAAAGCTGGAACAGCT
TCCATACTACGAGGAAGCCAATGGCAAGGGCGTCCGCCAGTTGGTGGCCA
TTTTCAAGAAGACCAATTTCACATTCGAAGCATGAAAGCTTTCTAGACCA
T
BS11904.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:59:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE6-RA | 669 | CG17530-PA | 1..669 | 17..685 | 3345 | 100 | Plus |
GstE5-RA | 669 | CG17527-PA | 1..656 | 17..672 | 790 | 74.7 | Plus |
GstE7-RA | 672 | CG17531-PA | 138..611 | 154..627 | 480 | 73.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:59:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE6-RA | 751 | CG17530-RA | 32..700 | 17..685 | 3345 | 100 | Plus |
GstE5-RA | 734 | CG17527-RA | 28..685 | 15..672 | 800 | 74.8 | Plus |
GstE7-RA | 765 | CG17531-RA | 169..642 | 154..627 | 480 | 73.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:59:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18406042..18406710 | 17..685 | 3345 | 100 | Plus |
2R | 25286936 | 2R | 18404632..18405289 | 15..672 | 800 | 74.8 | Plus |
2R | 25286936 | 2R | 18407092..18407565 | 154..627 | 480 | 73.4 | Plus |
2R | 25286936 | 2R | 18408003..18408344 | 160..501 | 390 | 74.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:59:44 has no hits.
BS11904.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:47:36 Download gff for
BS11904.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 1..669 | 17..685 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:22:54 Download gff for
BS11904.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 30..702 | 17..691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:30:46 Download gff for
BS11904.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..699 | 17..684 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:47:36 Download gff for
BS11904.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 30..702 | 17..691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:00:59 Download gff for
BS11904.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE6-RA | 32..699 | 17..684 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:00:59 Download gff for
BS11904.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18406042..18406709 | 17..684 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:30:46 Download gff for
BS11904.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14293547..14294214 | 17..684 | 100 | | Plus |
BS11904.pep Sequence
Translation from 16 to 684
> BS11904.pep
MVKLTLYGLDPSPPVRAVKLTLAALNLTYEYVNVDIVARAQLSPEYLEKN
PQHTVPTLEDDGHYIWDSHAIIAYLVSKYADSDALYPKDPLKRAVVDQRL
HFESGVVFANGIRSISKSVLFQGQTKVPKERYDAIIEIYDFVETFLKGQD
YIAGNQLTIADFSLVSSVASLEAFVALDTTKYPRIGAWIKKLEQLPYYEE
ANGKGVRQLVAIFKKTNFTFEA*
BS11904.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:30:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE6-PA | 222 | CG17530-PA | 1..222 | 1..222 | 1134 | 100 | Plus |
GstE5-PA | 222 | CG17527-PA | 1..220 | 1..220 | 884 | 75.5 | Plus |
GstE8-PB | 222 | CG17533-PB | 1..220 | 1..220 | 831 | 70.5 | Plus |
GstE8-PA | 222 | CG17533-PA | 1..220 | 1..220 | 831 | 70.5 | Plus |
GstE7-PA | 223 | CG17531-PA | 1..220 | 1..220 | 826 | 70 | Plus |