BS11967.complete Sequence
1169 bp assembled on 2006-11-01
GenBank Submission: FJ637033
> BS11967.complete
GAAGTTATCAGTCGACATGGGCGCGGACATGGGCATCAATGGACCGCTCA
GCTATCACTCGTCCGCCTACAAGCGACCCGGCAACAATATCTACATCACC
AGGAGAATTGGCGAGGCGGTGGAACTAGAGCCGCATCTGCGAAAGCCCGT
GGAGAGCCAGAGTCCCATTGTGAATCCTCAGTTCCGACCCATGACCAATC
AAATGTTGCACCAGCAACACCAACAGATGCAGCAACAACAGCAACAGCAA
CAGTTGCAGCAACGCCAGCAACCGGGTTTCCTGCAGCAGCTCTTTGGCAT
AGGTGGCAGTGGTGGTGGTGGTGGTAGCGGTACCCAGCAACAGCAACATG
TGCGACCAGTGCCGCTGCAACAGCAGCAAGTGCAACAGATAGCGCAGCAA
CACCCGCAACAGCAACATCTTGTGGGCGGTCAGCCGACCACATTCCGAGC
TGTCTCCGAAAATGATCTTTATCTCTTGGGAGCCATTGAAAAGTTGGTGT
ATCGAGTGGATTACCTGGAGAGTCGCGTGCGGCGCTCGGAGCAGCTGATC
TACTATCTGATGGCCGGAAACAATCAGAAGGAGGTGAAGGATCCCTGTCC
CGCGAACTTCACGCGCATCAGCGACAACTGCTACTACATCAACAGCCAGC
AGCAGGTGAACTGGAAGACGGCAAACTCTGCCTGCAAGGGTCTAAACTCC
CACCTGGCCGAGTTCGAGAAGGTCTCGGAGAATGAGGAGATCATGGCCTA
TCTGCTGAATCAGCCGACGCATCGTGGTCGCGATTACTGGCTGGGCGGTC
TCAATCCTGGCCTCCTCTGGATCTGGTCCAATTCGGCTAAGCCGGTGAAT
CCCAACATGAATCTCACATCCATTGCGATGGCCCAGAAGGGGGAGAACTC
GACGGCCGCCAATCTGGTGGACAGTTCGGAGCAGGCGGCAGAGGAGGCGA
CCGGCGAGGATGTGCTGAACAACACGGTGCAAATAGAGGGCAAGGGTCGC
TGCCTACGGCTAAGTTACAATGCCGGAAAGCACAGCTATGTGTACTACGG
ACAGGAGTGCACCTCGCGGCACTACTACATCTGCGAGCACGAGGACAAGA
CGCTGGACAACAAGATCAAGAAGATCACCCGCGAGCTGAAGCTGTTCGAG
TGAAAGCTTTCTAGACCAT
BS11967.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:09:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14866-RB | 1368 | CG14866-PB | 232..1368 | 17..1153 | 5685 | 100 | Plus |
CG14866-RA | 1137 | CG14866-PA | 1..1137 | 17..1153 | 5685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:09:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14866-RB | 1687 | CG14866-RB | 404..1540 | 17..1153 | 5685 | 100 | Plus |
CG14866-RA | 1759 | CG14866-RA | 476..1612 | 17..1153 | 5685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:09:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15317494..15318138 | 509..1153 | 3225 | 100 | Plus |
3R | 32079331 | 3R | 15316946..15317438 | 17..509 | 2465 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 22:09:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6923 | 208..377 | 248 | 62.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6938 | 229..434 | 235 | 59.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2483..2686 | 208..420 | 199 | 58.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2622..2691 | 209..278 | 179 | 72.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6864 | 335..414 | 174 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6824 | 335..419 | 173 | 67.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2409 | 326..419 | 168 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2391 | 335..419 | 166 | 68.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6845 | 335..419 | 164 | 65.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1079..1164 | 335..420 | 160 | 65.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6881 | 335..419 | 156 | 68.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2376..2463 | 335..419 | 153 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2376 | 348..419 | 151 | 70.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6797 | 352..419 | 150 | 70.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2861 | 335..412 | 140 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6776 | 362..419 | 130 | 72.4 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3259..3336 | 333..416 | 127 | 65.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1072..1130 | 361..419 | 124 | 67.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2358 | 367..419 | 121 | 69.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6503..6617 | 580..696 | 121 | 57.3 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3300..3381 | 335..417 | 116 | 63.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1097..1173 | 335..417 | 113 | 63.9 | Plus |
BS11967.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:47:11 Download gff for
BS11967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14866-RB | 232..1368 | 17..1153 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:22:25 Download gff for
BS11967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14866-RB | 232..1368 | 17..1153 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:48:51 Download gff for
BS11967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14866-RA | 476..1611 | 17..1152 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:47:11 Download gff for
BS11967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14866-RB | 232..1368 | 17..1153 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:02 Download gff for
BS11967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14866-RA | 476..1611 | 17..1152 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:02 Download gff for
BS11967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15316946..15317438 | 17..509 | 100 | -> | Plus |
3R | 15317495..15318137 | 510..1152 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:48:51 Download gff for
BS11967.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11142668..11143160 | 17..509 | 100 | -> | Plus |
arm_3R | 11143217..11143859 | 510..1152 | 100 | | Plus |
BS11967.pep Sequence
Translation from 16 to 1152
> BS11967.pep
MGADMGINGPLSYHSSAYKRPGNNIYITRRIGEAVELEPHLRKPVESQSP
IVNPQFRPMTNQMLHQQHQQMQQQQQQQQLQQRQQPGFLQQLFGIGGSGG
GGGSGTQQQQHVRPVPLQQQQVQQIAQQHPQQQHLVGGQPTTFRAVSEND
LYLLGAIEKLVYRVDYLESRVRRSEQLIYYLMAGNNQKEVKDPCPANFTR
ISDNCYYINSQQQVNWKTANSACKGLNSHLAEFEKVSENEEIMAYLLNQP
THRGRDYWLGGLNPGLLWIWSNSAKPVNPNMNLTSIAMAQKGENSTAANL
VDSSEQAAEEATGEDVLNNTVQIEGKGRCLRLSYNAGKHSYVYYGQECTS
RHYYICEHEDKTLDNKIKKITRELKLFE*
BS11967.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:31:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14866-PA | 378 | CG14866-PA | 1..378 | 1..378 | 2006 | 100 | Plus |
CG14866-PB | 455 | CG14866-PB | 78..455 | 1..378 | 2006 | 100 | Plus |