BS12001.complete Sequence
1622 bp assembled on 2006-11-01
GenBank Submission: FJ637034
> BS12001.complete
GAAGTTATCAGTCGACATGATCGCTGTTTTTTCACTCATTGCGGCTGCTC
TCGCCGTTGGATCCCTCGTTCTGCTCCCCGTTGTCCTAAGAGGTGGATGT
CTACTTGTCGTAACAATCGTTTGGCTGTGGCAAATTCTACACTTCTGGCA
TTGGCGACGTCTGGGCGTCCCCTTTGTTCCGGCTGCCCCATTTGTGGGGA
ATGTGTGGAATCTTTTGCGTGGAGCCTGCTGCTTTGGCGATCAGTTTCGC
GAGTTGTACGAGAGTAAGGAGGCTGCCGGCCGCGCCTTCGTGGGAATTGA
CGTGCTGCACAATCACGCACTGCTTCTTCGAGATCCGGCTCTGATCAAGC
GCATTATGGTGGAAGACTTCGCTCAGTTCTCGAGCCGCTTTGAGACGACA
GATCCCACTTGTGACACAATGGGATCGCAGAACCTTTTCTTTTCCAAATA
CGAGACTTGGCGGGAGACGCACAAGATCTTTGCGCCCTTCTTTGCTGCGG
GAAAGGTGCGCAATATGTACGGGCTTCTGGAAAACATTGGACAGAAGCTC
GAGGAGCACATGGAGCAAAAGCTAAGCGGCAGGGATAGCATGGAACTGGA
GGTCAAGCAGTTGTGTGCCCTCTTCACAACGGACATCATTGCATCCCTGG
CCTTTGGCATAGAGGCGCACAGTCTGCAAAATCCCGAGGCAGAGTTTCGT
CGTATGTGCATTGAGGTCAATGACCCCAGGCCAAAGCGCCTCCTACACCT
CTTCACCATGTTCTTCTTTCCGCGACTATCGCACAGGGTTGGCACCCATC
TTTACTCCGAAGAGTATGAGCGCTTTATGCGCAAGTCCATGGACTACGTT
CTTTCCCAGCGCGCGGAAAGTGGGGAAAATCGACACGATTTGATCGATAT
ATTCTTGCAGCTGAAGCGTACGGAGCCGGCGGAAAGCATAATCCATCGGC
CAGATTTCTTTGCAGCCCAGGCTGCTTTTCTGCTTTTGGCCGGCTTCGAC
ACCTCGTCGTCCACCATCACGTTTGCGCTGTACGAGCTGGCCAAGAACAC
CACGATTCAGGACCGCCTGCGGACGGAGCTTCGGGCTGCCTTGCAGTCTA
GCCAAGATCGGCAACTGAGCTGCGACACCGTCACCGGATTGGTTTACCTG
CGACAGGTAGTTGATGAGGTCTTGAGACTTTATCCGCCCACAGCTTTCCT
GGACCGATGCTGCAATTCCCGAACGGGCTATGATCTCTCGCCGTGGAACG
GTGGATCGCCATTCAAATTGCGTGCGGGCACGCCTGTCTACATATCGGTG
TTGGGAATCCATCGTGATGCACAGTACTGGCCAAATCCCGAAGTCTTCGA
CCCGGAGCGCTTCTCAGCGGAGCAACGGCAACAGCACCATCCCATGACCT
ATTTGCCCTTTGGCGCAGGACCAAGAGGTTGCATCGGGACTCTTTTGGGG
CAGTTGGAGATCAAAGTTGGACTGCTGCACATCCTAAATCACTTTCGGGT
TGAGGTCTGCGAAAGGACGCTACCAGAAATGCGGTTCGATCCCAAGGCCT
TTGTACTCACTGCTCACAATGGGACCTATCTACGTTTTGTTAAGAATTCT
CTTTGAAAGCTTTCTAGACCAT
BS12001.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:46:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6t1-RA | 1590 | CG1644-PA | 1..1590 | 17..1606 | 7950 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:46:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6t1-RA | 1785 | CG1644-RA | 81..1672 | 17..1608 | 7960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:46:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21517547..21519138 | 1608..17 | 7960 | 100 | Minus |
| 2L | 23513712 | 2L | 21283834..21284098 | 483..219 | 575 | 81.1 | Minus |
| 2L | 23513712 | 2L | 21283248..21283613 | 1158..783 | 520 | 77.1 | Minus |
| 2L | 23513712 | 2L | 21282810..21283014 | 1607..1403 | 500 | 82.9 | Minus |
| 2L | 23513712 | 2L | 21283632..21283704 | 739..667 | 215 | 86.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:46:40 has no hits.
BS12001.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:47:12 Download gff for
BS12001.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6t1-RA | 1..1590 | 17..1606 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:22:27 Download gff for
BS12001.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6t1-RA | 25..1623 | 10..1608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:01:54 Download gff for
BS12001.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6t1-RA | 32..1620 | 17..1605 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:47:12 Download gff for
BS12001.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6t1-RA | 25..1623 | 10..1608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:26:12 Download gff for
BS12001.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6t1-RA | 81..1669 | 17..1605 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:26:12 Download gff for
BS12001.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21517550..21519138 | 17..1605 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:01:54 Download gff for
BS12001.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21388577..21390165 | 17..1605 | 100 | | Minus |
BS12001.pep Sequence
Translation from 16 to 1605
> BS12001.pep
MIAVFSLIAAALAVGSLVLLPVVLRGGCLLVVTIVWLWQILHFWHWRRLG
VPFVPAAPFVGNVWNLLRGACCFGDQFRELYESKEAAGRAFVGIDVLHNH
ALLLRDPALIKRIMVEDFAQFSSRFETTDPTCDTMGSQNLFFSKYETWRE
THKIFAPFFAAGKVRNMYGLLENIGQKLEEHMEQKLSGRDSMELEVKQLC
ALFTTDIIASLAFGIEAHSLQNPEAEFRRMCIEVNDPRPKRLLHLFTMFF
FPRLSHRVGTHLYSEEYERFMRKSMDYVLSQRAESGENRHDLIDIFLQLK
RTEPAESIIHRPDFFAAQAAFLLLAGFDTSSSTITFALYELAKNTTIQDR
LRTELRAALQSSQDRQLSCDTVTGLVYLRQVVDEVLRLYPPTAFLDRCCN
SRTGYDLSPWNGGSPFKLRAGTPVYISVLGIHRDAQYWPNPEVFDPERFS
AEQRQQHHPMTYLPFGAGPRGCIGTLLGQLEIKVGLLHILNHFRVEVCER
TLPEMRFDPKAFVLTAHNGTYLRFVKNSL*
BS12001.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:31:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6t1-PA | 529 | CG1644-PA | 1..529 | 1..529 | 2787 | 100 | Plus |
| Cyp6g2-PA | 519 | CG8859-PA | 12..517 | 31..529 | 1002 | 40.3 | Plus |
| Cyp6v1-PC | 520 | CG1829-PC | 14..516 | 31..523 | 920 | 38.1 | Plus |
| Cyp6v1-PB | 520 | CG1829-PB | 14..516 | 31..523 | 920 | 38.1 | Plus |
| Cyp6v1-PA | 520 | CG1829-PA | 14..516 | 31..523 | 920 | 38.1 | Plus |
