BS12022.complete Sequence
1499 bp assembled on 2008-08-14
GenBank Submission: FJ637037
> BS12022.complete
GAAGTTATCAGTCGACATGCTGCGCAAGTCAAAGAAACAGCCACAGACGG
TGGCCGAGAAGGTCAGCAAGCTGCTTGCCCATCCGAACGAGAGCGACAGC
GCAGAGGACTCGGACTTCGATGTGGCCACAGGGCCACGTCTGGTGGACTT
CGAGGAGGAGGAGTACGACCTGCCGGATGCCCGGAGCACCGACTTTAGGA
AGAGGAACGTCAAGCTGCTCTCGGAGCAGAGTGACCGCTACAAAGGAAAG
ATCAGCAGTCGCAAGGAGTTGGATGACGATGAGGATAAGGATGATGAACA
AGAGGTGTCCTACGAAGAAAGCGATGAGGATGATGAGAACTTGACAAACT
TTAAGCAGAAGTTAAATGCTGGAGGAGCTGAAGACTCCGAGGAGGAAACG
GCTGCTGGACATTCCGAATCTGGTGAAGAAAGTGAGGAGATTGAGAGCAA
TTTGACAGACTTTAAAAAAAAGTTTGAGGCTGGAGATTTTAAGTATGATG
ATGATGAGGAGGAGGATGATGACTCTGAGGAAGAAGACCATAGCCAGGAA
AGTGAAGGAGATGACGACGATTCAGAAGATGATGAAGCAGAAGACGACGC
AATCAAACCCTCGGATGTAATGTCCAAAACCAACCATCAAGCTGAAATCC
AAAAAGGACTTGCCGTCCAAAACCAGCTGCGCATCTGGGAGCGTCTTCTC
GAGCTAAGGATCAACACCCAAAAGTTCACCAGCAAAGCGAATCAGCTTCC
TGCACCGGAAACTCTAACGAAACTGGCATCGGAAAGCGATGAGCTTCAGT
CGGTGCTTAACGAGGCCCAGGAGCGTTCATCCAAGCTACTGCAGCAACTG
CTCTCCCTCCAGTCAGCTCTCCACCAGCAATACTCCGAGATGAAAAAGTC
GGTGAAGCGCAAGCAGCCCACAGAGGATTCGGGTCCGGCGGTCAAAAAGT
TTGGTTCTGTGCTGCAGAGCAATTTCCAACAAATGATTGGGTATCGCAAT
GAAGTTCTGTTAAAGTGGGACGACCGTACGAAACTCCTGACCCCCGGAGC
GGGTGTCAAACGCAAGTCCTTGCAGGAGGACTACGACATCATCAAAAAGA
TCGGCAGCGCCCTGGCGAACCGAGAGGCGCTCGTGGAAAAGTCCCAGACC
CCAAAGAACAGCCAGGCGGAGCAGCAGGAAAACACGCCCGTGCAGCGATT
GAAGCACATCTACGACGACAGCGATTTCTACCACCAGCAGCTGCGGGAGC
TCATCGAGTACAAGGCCAGCACCTCGTCCAACATGAGCGAGATTACCAAG
CAGTTCGTGGAGCTACAGAAGCTGCGCCAGAAGATGAAGAAGAAGGTGGA
CACCAGGGCCAGCAAGGGGCGAAAGCTGCGATACGTGGTGCACAACAAGC
TCATCAACTTCATGGCGCCCAATGAGAGTAGCGACTGGACGGATGCCTCC
AAGTCCGAGTTGTACAAATCATTGTTTGTCTAGAAGCTTTCTAGACCAT
BS12022.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:42:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aatf-RA | 1467 | CG11188-PA | 1..1467 | 17..1483 | 7335 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:42:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aatf-RA | 1703 | CG11188-RA | 87..1554 | 17..1484 | 7340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:42:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6717711..6719081 | 17..1387 | 6840 | 99.9 | Plus |
| 2L | 23513712 | 2L | 6719136..6719240 | 1380..1484 | 525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:42:24 has no hits.
BS12022.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:49:11 Download gff for
BS12022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11188-RA | 81..1554 | 9..1488 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:33:21 Download gff for
BS12022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11188-RA | 87..1553 | 17..1483 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:12:19 Download gff for
BS12022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11188-RA | 85..1551 | 17..1483 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:25:01 Download gff for
BS12022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aatf-RA | 87..1553 | 17..1483 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:25:01 Download gff for
BS12022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6717711..6719074 | 17..1380 | 100 | -> | Plus |
| 2L | 6719137..6719239 | 1381..1483 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:33:21 Download gff for
BS12022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6719137..6719239 | 1381..1483 | 100 | | Plus |
| arm_2L | 6717711..6719074 | 17..1380 | 100 | -> | Plus |
BS12022.pep Sequence
Translation from 16 to 1482
> BS12022.pep
MLRKSKKQPQTVAEKVSKLLAHPNESDSAEDSDFDVATGPRLVDFEEEEY
DLPDARSTDFRKRNVKLLSEQSDRYKGKISSRKELDDDEDKDDEQEVSYE
ESDEDDENLTNFKQKLNAGGAEDSEEETAAGHSESGEESEEIESNLTDFK
KKFEAGDFKYDDDEEEDDDSEEEDHSQESEGDDDDSEDDEAEDDAIKPSD
VMSKTNHQAEIQKGLAVQNQLRIWERLLELRINTQKFTSKANQLPAPETL
TKLASESDELQSVLNEAQERSSKLLQQLLSLQSALHQQYSEMKKSVKRKQ
PTEDSGPAVKKFGSVLQSNFQQMIGYRNEVLLKWDDRTKLLTPGAGVKRK
SLQEDYDIIKKIGSALANREALVEKSQTPKNSQAEQQENTPVQRLKHIYD
DSDFYHQQLRELIEYKASTSSNMSEITKQFVELQKLRQKMKKKVDTRASK
GRKLRYVVHNKLINFMAPNESSDWTDASKSELYKSLFV*
BS12022.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:58:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aatf-PA | 488 | CG11188-PA | 1..488 | 1..488 | 2472 | 100 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 770..944 | 24..210 | 185 | 28.3 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 770..944 | 24..210 | 185 | 28.3 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 690..846 | 44..194 | 179 | 30.8 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 730..894 | 25..194 | 179 | 27 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 690..846 | 44..194 | 179 | 30.8 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 730..894 | 25..194 | 179 | 27 | Plus |
| FK506-bp1-PA | 357 | CG6226-PA | 89..245 | 84..258 | 177 | 29.7 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 793..977 | 25..197 | 165 | 26.1 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 793..977 | 25..197 | 165 | 26.1 | Plus |
| l(2)01289-PG | 1191 | CG9432-PG | 801..983 | 24..208 | 159 | 25.4 | Plus |
| l(2)01289-PM | 1193 | CG9432-PM | 801..983 | 24..208 | 159 | 25.4 | Plus |
