Clone Sequence Records
BS12032.3prime Sequence
351 bp (351 high quality bases) assembled on 2006-06-16
> BS12032.3prime
ATGGTCTAGAAAGCTTCTACTGGCTGCTCCGCTTGATGCGCTCGACATGC
AGGTCGTACAGCATCTTGTTCTTCTCGTAGTAAAATGGGTTTTGTTCGGC
TCCCAGTTCTGGGTTGTATTCGTATCCGGCCGCCACACCGTTTCCGGCTG
CATCGGACCCGCCGGATCCACCAGTCGCTCCTCCTCCCGACAGTGGCGGA
ATGCTGCAGCTGCTGCTGCTGCTGCTGTTCCCATCCTCGTAGTTCAGATT
CAGGTTGTTGATGCGCTTCGAAAGGGGCGACTCGCAGGCCAGTTCATCCT
CCCGGCTGCGCTTTCTTGTCTTCAGGAATCCAGCCATGTCGACTGATAAC
T
BS12032.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:27:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14229-PA | 321 | CG14229-RA | 1..321 | 337..17 | 1605 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:06:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14229-RB | 1018 | CG14229-RB | 108..428 | 337..17 | 1605 | 100 | Minus |
CG14229-RC | 989 | CG14229-RC | 300..620 | 337..17 | 1605 | 100 | Minus |
CG14229-RA | 797 | CG14229-RA | 108..428 | 337..17 | 1605 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:06:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19694567..19694866 | 17..316 | 1500 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:06:48 has no hits.
BS12032.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:30:38 Download gff for
BS12032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-PA | 1..321 | 17..337 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:00:08 Download gff for
BS12032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-RA | 102..428 | 17..347 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:51:52 Download gff for
BS12032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-RA | 102..428 | 17..347 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 10:51:52 Download gff for
BS12032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19694567..19694864 | 17..314 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:00:08 Download gff for
BS12032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19588600..19588897 | 17..314 | 100 | <- | Plus |
BS12032.5prime Sequence
351 bp (351 high quality bases) assembled on 2006-06-16
> BS12032.5prime
GAAGTTATCAGTCGACATGGCTGGATTCCTGAAGACAAGAAAGCGCAGCC
GGGAGGATGAACTGGCCTGCGAGTCGCCCCTTTCGAAGCGCATCAACAAC
CTGAATCTGAACTACGAGGATGGGAACAGCAGCAGCAGCAGCAGCTGCAG
CATTCCGCCACTGTCGGGAGGAGGAGCGACTGGTGGATCCGGCGGGTCCG
ATGCAGCCGGAAACGGTGTGGCGGCCGGATACGAATACAACCCAGAACTG
GGAGCCGAACAAAACCCATTTTACTACGAGAAGAACAAGATGCTGTACGA
CCTGCATGTCGAGCGCATCAAGCGGAGCAGCCAGTAGAAGCTTTCTAGAC
C
BS12032.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:27:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14229-PA | 321 | CG14229-RA | 1..321 | 17..337 | 1605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:50:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14229-RB | 1018 | CG14229-RB | 108..428 | 17..337 | 1605 | 100 | Plus |
CG14229-RC | 989 | CG14229-RC | 300..620 | 17..337 | 1605 | 100 | Plus |
CG14229-RA | 797 | CG14229-RA | 108..428 | 17..337 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:50:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19694567..19694866 | 337..38 | 1500 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 03:50:10 has no hits.
BS12032.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:30:38 Download gff for
BS12032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-PA | 1..321 | 17..337 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:30:31 Download gff for
BS12032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-RA | 102..428 | 7..337 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:56:05 Download gff for
BS12032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-RA | 102..428 | 7..337 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:56:05 Download gff for
BS12032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19694567..19694864 | 40..337 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:30:31 Download gff for
BS12032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19588600..19588897 | 40..337 | 100 | <- | Minus |
BS12032.complete Sequence
353 bp assembled on 2006-11-01
GenBank Submission: FJ638840
> BS12032.complete
GAAGTTATCAGTCGACATGGCTGGATTCCTGAAGACAAGAAAGCGCAGCC
GGGAGGATGAACTGGCCTGCGAGTCGCCCCTTTCGAAGCGCATCAACAAC
CTGAATCTGAACTACGAGGATGGGAACAGCAGCAGCAGCAGCAGCTGCAG
CATTCCGCCACTGTCGGGAGGAGGAGCGACTGGTGGATCCGGCGGGTCCG
ATGCAGCCGGAAACGGTGTGGCGGCCGGATACGAATACAACCCAGAACTG
GGAGCCGAACAAAACCCATTTTACTACGAGAAGAACAAGATGCTGTACGA
CCTGCATGTCGAGCGCATCAAGCGGAGCAGCCAGTAGAAGCTTTCTAGAC
CAT
BS12032.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:47:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14229-RB | 321 | CG14229-PB | 1..321 | 17..337 | 1605 | 100 | Plus |
CG14229-RC | 321 | CG14229-PC | 1..321 | 17..337 | 1605 | 100 | Plus |
CG14229-RA | 321 | CG14229-PA | 1..321 | 17..337 | 1605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:47:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14229-RB | 1018 | CG14229-RB | 108..428 | 17..337 | 1605 | 100 | Plus |
CG14229-RC | 989 | CG14229-RC | 300..620 | 17..337 | 1605 | 100 | Plus |
CG14229-RA | 797 | CG14229-RA | 108..428 | 17..337 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:47:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19694567..19694866 | 337..38 | 1500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:47:34 has no hits.
BS12032.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:45:03 Download gff for
BS12032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-RA | 1..321 | 17..337 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:11:07 Download gff for
BS12032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-RA | 85..411 | 7..337 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:51:55 Download gff for
BS12032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-RA | 108..428 | 17..337 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:45:03 Download gff for
BS12032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-RA | 85..411 | 7..337 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:18:45 Download gff for
BS12032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14229-RA | 108..428 | 17..337 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:18:45 Download gff for
BS12032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19694567..19694864 | 40..337 | 100 | <- | Minus |
X | 19694929..19694951 | 17..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:51:55 Download gff for
BS12032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19588600..19588897 | 40..337 | 100 | <- | Minus |
arm_X | 19588962..19588984 | 17..39 | 100 | | Minus |
BS12032.pep Sequence
Translation from 16 to 336
> BS12032.pep
MAGFLKTRKRSREDELACESPLSKRINNLNLNYEDGNSSSSSSCSIPPLS
GGGATGGSGGSDAAGNGVAAGYEYNPELGAEQNPFYYEKNKMLYDLHVER
IKRSSQ*
BS12032.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:35:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14229-PB | 106 | CG14229-PB | 1..106 | 1..106 | 554 | 100 | Plus |
CG14229-PC | 106 | CG14229-PC | 1..106 | 1..106 | 554 | 100 | Plus |
CG14229-PA | 106 | CG14229-PA | 1..106 | 1..106 | 554 | 100 | Plus |