BS12051.complete Sequence
1442 bp assembled on 2006-11-01
> BS12051.complete
GAAGTTATCAGTCGACATGTCTCTAAAAGAGGATCCAAGCCAGCGCACGT
GCACAGGATTTACGATCGGATTCAAACTGCTGTCCAAGAAACTGGCGGAA
AACATCCTAGGCACCGGAATTGTGGATTTTGAGAATTGTCTCTATGAGTG
CCAATTTGCCAGCGATAGCATTGAAGGCTTTTCCGTGGGCCTCCTTGGAG
GAGAGTTTAAACTGAAGTCCAAATCGAACACCAACTGGTTGGAATTTGTG
CTCAGACCAAAGCTCTTAAGCTGGTCTCAGTCCAAGCAGGATGAAGCAAA
GGTGAAGTCACTAGGTTTGGTTAATGTGGAAAAGTACAATGATCTGTACA
AGGAGTTGAAACAGAGGCATTCACAACGCCTGCTGGAACACTGGAAGACC
GCACAGGAGTCCACGGATCCGCTCAAGTTCATTTACGAGGATTTGGCTAT
CGCTGCTTATCTTATAGTTTTGTGGAGTCAAACACAATCGGAGCCCACTG
CCTTCGCTGATTTGGGTTGTGGAAACGGTCTGTTAGTTCATGTCCTCAAC
GCCGAGGGCTACAAAGGGTATGGCTACGATATAAGAAAGCGAAAGCTATG
GTCCCTCTATCCACCGGATACCCAAAGGAGCCTCATTGAAAAGGCCGTGG
AGCCCAACAGCTTCCGCTTGGATTTTCCGGGTGTGGATTGGTTGATTGGT
AACCATTCGGACGAGTTGTCTCCTTGGCTACCGGTTTTGGCTGGTCGTTT
GAACATTAACTATTTCCTACTGCCCTGCTGTCCCTTTGAACTGTCGGGAG
CCAAGTTTCGCAGGCGGAATACGAAGATAAGTGCCTACCAGGATTTCTTT
CAATACGTCACTCAGGTCTCTCATGAATGTGGCTATGAGATCCTACAAGA
CCGTCTAAAAATACCAAGCACCAAGCGATTGGCTCTGCTGGGAATTAAGA
GAAAAGCCTCAAAGGCTATTGAAGATCTGGAGTACTTTGTCCAAGAAGAG
CTAAGAAAGTATAAGACCGGAGATGCCAAAATTAAGCTGCGCGAGAAGGA
GGAGAGCGTTCGAAATTGCACGCAGGTGGATAAGACCATAATTGATGGTC
TAGTGTTTAAGATCTTCAAACTGATTCTGGACTCTAACGAAGATAAATGG
TCTGGTCGTCTGCCCATGAGAGAGATTGCCCAGGCTCTCACCAAGGAGGA
GCTGAGTGGCATTAAATCCGAGTGCGGCGGCATCAAAACATTGCTGCGCA
ATAAACACGAAGTTTTCGAATTCTGCGGTGGTGATCTCATAGGAATAAGA
ACCCCTAAACCAACGGCTACTCTCCCCAAATCCCATTTGACCATCAAGAA
ACGTAGCTGCTTTTTCAAGCTTCATCATCCGCTGGGATGTCCTCTCGATG
ATGCTGAGTGCTCGTTTATACACTAAAAGCTTTCTAGACCAT
BS12051.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9386-RA | 1566 | CG9386-PA | 157..1566 | 17..1426 | 7050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9386-RA | 1652 | CG9386-RA | 176..1585 | 17..1426 | 7050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9553763..9555064 | 1426..125 | 6510 | 100 | Minus |
| 3R | 32079331 | 3R | 9555125..9555233 | 125..17 | 545 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:49:50 has no hits.
BS12051.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:46:56 Download gff for
BS12051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9386-RA | 149..1566 | 10..1426 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:22:05 Download gff for
BS12051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9386-RA | 149..1573 | 10..1435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:36 Download gff for
BS12051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9386-RA | 176..1583 | 17..1424 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:46:56 Download gff for
BS12051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9386-RA | 149..1573 | 10..1435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:41 Download gff for
BS12051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9386-RA | 176..1583 | 17..1424 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:41 Download gff for
BS12051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9553765..9555063 | 126..1424 | 100 | <- | Minus |
| 3R | 9555125..9555233 | 17..125 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:36 Download gff for
BS12051.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5379487..5380785 | 126..1424 | 100 | <- | Minus |
| arm_3R | 5380847..5380955 | 17..125 | 100 | | Minus |
BS12051.pep Sequence
Translation from 16 to 1425
> BS12051.pep
MSLKEDPSQRTCTGFTIGFKLLSKKLAENILGTGIVDFENCLYECQFASD
SIEGFSVGLLGGEFKLKSKSNTNWLEFVLRPKLLSWSQSKQDEAKVKSLG
LVNVEKYNDLYKELKQRHSQRLLEHWKTAQESTDPLKFIYEDLAIAAYLI
VLWSQTQSEPTAFADLGCGNGLLVHVLNAEGYKGYGYDIRKRKLWSLYPP
DTQRSLIEKAVEPNSFRLDFPGVDWLIGNHSDELSPWLPVLAGRLNINYF
LLPCCPFELSGAKFRRRNTKISAYQDFFQYVTQVSHECGYEILQDRLKIP
STKRLALLGIKRKASKAIEDLEYFVQEELRKYKTGDAKIKLREKEESVRN
CTQVDKTIIDGLVFKIFKLILDSNEDKWSGRLPMREIAQALTKEELSGIK
SECGGIKTLLRNKHEVFEFCGGDLIGIRTPKPTATLPKSHLTIKKRSCFF
KLHHPLGCPLDDAECSFIH*
BS12051.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:32:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9386-PA | 521 | CG9386-PA | 53..521 | 1..469 | 2474 | 100 | Plus |
