Clone Sequence Records
BS12067.3prime Sequence
744 bp (744 high quality bases) assembled on 2006-06-16
> BS12067.3prime
ATGGTCTAGAAAGCTTCTACTTTTCAACAAAATCCTCGTTGGTGTTGTAA
ACTGGCTGCAGGCGTCTTGGATATTTACGCAAATATTCGGCAAAATGTTG
GGCATATTTGGCCTGGTAATCACGACGCCTCCAGGGCTGAGCGGGTTCAT
AGAAATTCTCCTTATTATTGTACGTATTTAGATAGTTATTTGTGGCCAAT
GAGCGACTGCCGCCAATTTGGACCACTTGCTCCTCATCGCGACCCGAATC
GCTGGTCTCCAATTCCGGATTCCTTTGTGGATATGGCTGAAGTTGAGGTG
GAATTTGAGATTGAGGATAGCGCAGAGGTGTTGATGGCGTAGTCTCCTGT
TGTTGATAGTAAAAGTAGCCGGGCACATTGTTATAGTTGTGATTGGGAGC
ATGTGTTGGGTCTTCCCTTCTCCAATTTGGATATGCTTGTCTATACGCAG
GTTCCGCAACATAATAACCATTACTTTTTGGATACTGCTGCTGTTCCTGG
GCACTGTACTGATTATCATTCACTATGATAGGCGGACCCGACCATATCGA
TTGTACATCTGGATTGGCATAGTTGGATTGAGCGTAGTTGGATGTGGTAA
TTGCATAAGCACTGCCATAAGGTGATGCATACTGAGCTCTCCCACAAACT
GCATCGATCATCAGGGGCATAAGTGCACATAGCCAGCTCGACGAGCTGCT
CTTCACGATCCGTCCTGTTTGCGGCTTCATGTCGACTGATAACT
BS12067.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:27:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14153-PA | 714 | CG14153-RA | 1..714 | 730..17 | 3570 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 03:51:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14153-RA | 1022 | CG14153-RA | 7..729 | 738..17 | 3575 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 03:51:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10643656..10644322 | 683..17 | 3335 | 100 | Minus |
3L | 28110227 | 3L | 10643543..10643590 | 730..683 | 240 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 03:51:41 has no hits.
BS12067.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:30:47 Download gff for
BS12067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-PA | 1..714 | 17..730 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:30:57 Download gff for
BS12067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-RA | 1..729 | 17..742 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:58:56 Download gff for
BS12067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-RA | 1..729 | 17..742 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:58:56 Download gff for
BS12067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10643534..10643590 | 683..738 | 96 | -> | Minus |
3L | 10643657..10644322 | 17..682 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:30:57 Download gff for
BS12067.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10636634..10636690 | 683..738 | 96 | -> | Minus |
arm_3L | 10636757..10637422 | 17..682 | 100 | | Minus |
BS12067.5prime Sequence
744 bp (744 high quality bases) assembled on 2006-06-16
> BS12067.5prime
GAAGTTATCAGTCGACATGAAGCCGCAAACAGGACGGATCGTGAAGAGCA
GCTCGTCGAGCTGGCTATGTGCACTTATGCCCCTGATGATCGATGCAGTT
TGTGGGAGAGCTCAGTATGCATCACCTTATGGCAGTGCTTATGCAATTAC
CACATCCAACTACGCTCAATCCAACTATGCCAATCCAGATGTACAATCGA
TATGGTCGGGTCCGCCTATCATAGTGAATGATAATCAGTACAGTGCCCAG
GAACAGCAGCAGTATCCAAAAAGTAATGGTTATTATGTTGCGGAACCTGC
GTATAGACAAGCATATCCAAATTGGAGAAGGGAAGACCCAACACATGCTC
CCAATCACAACTATAACAATGTGCCCGGCTACTTTTACTATCAACAACAG
GAGACTACGCCATCAACACCTCTGCGCTATCCTCAATCTCAAATTCCACC
TCAACTTCAGCCATATCCACAAAGGAATCCGGAATTGGAGACCAGCGATT
CGGGTCGCGATGAGGAGCAAGTGGTCCAAATTGGCGGCAGTCGCTCATTG
GCCACAAATAACTATCTAAATACGTACAATAATAAGGAGAATTTCTATGA
ACCCGCTCAGCCCTGGAGGCGTCGTGATTACCAGGCCAAATATGCCCAAC
ATTTTGCCGAATATTTGCGTAAATATCCAAGACGCCTGCAGCCAGTTTAC
AACACCAACGAGGATTTTGTTGAAAAGTAGAAGCTTTCTAGACC
BS12067.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:27:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14153-PA | 714 | CG14153-RA | 1..714 | 17..730 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:44:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14153-RA | 1022 | CG14153-RA | 7..729 | 9..730 | 3575 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:44:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10643656..10644322 | 64..730 | 3335 | 100 | Plus |
3L | 28110227 | 3L | 10643543..10643590 | 17..64 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 17:44:52 has no hits.
BS12067.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:30:47 Download gff for
BS12067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-PA | 1..714 | 17..730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:49:47 Download gff for
BS12067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-RA | 1..729 | 5..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:04:43 Download gff for
BS12067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-RA | 1..729 | 5..730 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:04:43 Download gff for
BS12067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10643534..10643590 | 9..64 | 96 | -> | Plus |
3L | 10643657..10644322 | 65..730 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:49:47 Download gff for
BS12067.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10636634..10636690 | 9..64 | 96 | -> | Plus |
arm_3L | 10636757..10637422 | 65..730 | 100 | | Plus |
BS12067.complete Sequence
746 bp assembled on 2006-11-01
GenBank Submission: FJ637057
> BS12067.complete
GAAGTTATCAGTCGACATGAAGCCGCAAACAGGACGGATCGTGAAGAGCA
GCTCGTCGAGCTGGCTATGTGCACTTATGCCCCTGATGATCGATGCAGTT
TGTGGGAGAGCTCAGTATGCATCACCTTATGGCAGTGCTTATGCAATTAC
CACATCCAACTACGCTCAATCCAACTATGCCAATCCAGATGTACAATCGA
TATGGTCGGGTCCGCCTATCATAGTGAATGATAATCAGTACAGTGCCCAG
GAACAGCAGCAGTATCCAAAAAGTAATGGTTATTATGTTGCGGAACCTGC
GTATAGACAAGCATATCCAAATTGGAGAAGGGAAGACCCAACACATGCTC
CCAATCACAACTATAACAATGTGCCCGGCTACTTTTACTATCAACAACAG
GAGACTACGCCATCAACACCTCTGCGCTATCCTCAATCTCAAATTCCACC
TCAACTTCAGCCATATCCACAAAGGAATCCGGAATTGGAGACCAGCGATT
CGGGTCGCGATGAGGAGCAAGTGGTCCAAATTGGCGGCAGTCGCTCATTG
GCCACAAATAACTATCTAAATACGTACAATAATAAGGAGAATTTCTATGA
ACCCGCTCAGCCCTGGAGGCGTCGTGATTACCAGGCCAAATATGCCCAAC
ATTTTGCCGAATATTTGCGTAAATATCCAAGACGCCTGCAGCCAGTTTAC
AACACCAACGAGGATTTTGTTGAAAAGTAGAAGCTTTCTAGACCAT
BS12067.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:41:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14153-RA | 714 | CG14153-PA | 1..714 | 17..730 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:41:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14153-RA | 1022 | CG14153-RA | 16..729 | 17..730 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:41:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10643656..10644322 | 64..730 | 3335 | 100 | Plus |
3L | 28110227 | 3L | 10643543..10643590 | 17..64 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:41:30 has no hits.
BS12067.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:46:47 Download gff for
BS12067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-RA | 1..714 | 17..730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:21:54 Download gff for
BS12067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-RA | 2..724 | 9..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:29:41 Download gff for
BS12067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-RA | 16..729 | 17..730 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:46:47 Download gff for
BS12067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-RA | 2..724 | 9..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:36:21 Download gff for
BS12067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14153-RA | 16..729 | 17..730 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:36:21 Download gff for
BS12067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10643543..10643590 | 17..64 | 100 | -> | Plus |
3L | 10643657..10644322 | 65..730 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:29:41 Download gff for
BS12067.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10636643..10636690 | 17..64 | 100 | -> | Plus |
arm_3L | 10636757..10637422 | 65..730 | 100 | | Plus |
BS12067.pep Sequence
Translation from 16 to 729
> BS12067.pep
MKPQTGRIVKSSSSSWLCALMPLMIDAVCGRAQYASPYGSAYAITTSNYA
QSNYANPDVQSIWSGPPIIVNDNQYSAQEQQQYPKSNGYYVAEPAYRQAY
PNWRREDPTHAPNHNYNNVPGYFYYQQQETTPSTPLRYPQSQIPPQLQPY
PQRNPELETSDSGRDEEQVVQIGGSRSLATNNYLNTYNNKENFYEPAQPW
RRRDYQAKYAQHFAEYLRKYPRRLQPVYNTNEDFVEK*
BS12067.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:35:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14153-PA | 237 | CG14153-PA | 1..237 | 1..237 | 1300 | 100 | Plus |