Clone Sequence Records
BS12115.3prime Sequence
513 bp (513 high quality bases) assembled on 2006-06-16
> BS12115.3prime
ATGGTCTAGAAAGCTTCTAGTACCCATAGATGAACGTCTCGTAGACGAAG
CTGCGCGTCTGATTGGAGGTCAGCAGAATCTCCACGTTGGTCTGACCGAT
GCCACCCTTGGTCAGATAGCCACCGGCATCGTCCGCCGTCATGTCCACAT
ACACCTCGATGCTCGTCAGCGTGACCCCTGTGCTGGCTCCGGCCGGATAG
CTCATGAGCACCTCCACATCCTTGGCACTGGGAAAGCTGTCGTCATCGTA
GTGGTTCACAATGAGTCGGTCACCCGATGCCCGCTTTCCCGCGGTGAAGA
CCACGTTGCCCTTCGAGTGCTTCACCTTGTTCATCTCGTTCAGCTGTGCG
TCCGGATTGAGGGTGGTGTAGCGTGTTTCGTCGGTCACGGGCGTTATGTC
CGTATAGTAGAGATCGCTGGCACGGGCGTGTGGCTGTCCGGATACCGATG
CCATGATGCCCAGCACCAGGCAGAGCACTAGGAACATCTTTGTTAACATG
TCGACTGATAACT
BS12115.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:28:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15044-PA | 483 | CG15044-RA | 1..483 | 499..17 | 2415 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 06:38:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15044-RA | 822 | CG15044-RA | 116..598 | 499..17 | 2415 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 06:38:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18491409..18491891 | 17..499 | 2415 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-03 06:38:06 has no hits.
BS12115.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:31:00 Download gff for
BS12115.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-PA | 1..483 | 17..499 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:29:50 Download gff for
BS12115.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-RA | 113..605 | 8..505 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:38:11 Download gff for
BS12115.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-RA | 113..605 | 8..505 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:38:11 Download gff for
BS12115.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18491402..18491894 | 8..505 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:29:50 Download gff for
BS12115.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18385435..18385927 | 8..505 | 98 | | Plus |
BS12115.5prime Sequence
513 bp (513 high quality bases) assembled on 2006-06-16
> BS12115.5prime
GAAGTTATCAGTCGACATGTTAACAAAGATGTTCCTAGTGCTCTGCCTGG
TGCTGGGCATCATGGCATCGGTATCCGGACAGCCACACGCCCGTGCCAGC
GATCTCTACTATACGGACATAACGCCCGTGACCGACGAAACACGCTACAC
CACCCTCAATCCGGACGCACAGCTGAACGAGATGAACAAGGTGAAGCACT
CGAAGGGCAACGTGGTCTTCACCGCGGGAAAGCGGGCATCGGGTGACCGA
CTCATTGTGAACCACTACGATGACGACAGCTTTCCCAGTGCCAAGGATGT
GGAGGTGCTCATGAGCTATCCGGCCGGAGCCAGCACAGGGGTCACGCTGA
CGAGCATCGAGGTGTATGTGGACATGACGGCGGACGATGCCGGTGGCTAT
CTGACCAAGGGTGGCATCGGTCAGACCAACGTGGAGATTCTGCTGACCTC
CAATCAGACGCGCAGCTTCGTCTACGAGACGTTCATCTATGGGTACTAGA
AGCTTTCTAGACC
BS12115.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:28:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15044-PA | 483 | CG15044-RA | 1..483 | 17..499 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:34:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15044-RA | 822 | CG15044-RA | 116..598 | 17..499 | 2415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:34:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18491409..18491891 | 499..17 | 2415 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:34:25 has no hits.
BS12115.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:31:01 Download gff for
BS12115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-PA | 1..483 | 17..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:41:39 Download gff for
BS12115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-RA | 113..605 | 11..508 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:58:18 Download gff for
BS12115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-RA | 113..605 | 11..508 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:58:18 Download gff for
BS12115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18491402..18491894 | 11..508 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:41:39 Download gff for
BS12115.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18385435..18385927 | 11..508 | 98 | | Minus |
BS12115.complete Sequence
515 bp assembled on 2006-11-01
GenBank Submission: FJ637074
> BS12115.complete
GAAGTTATCAGTCGACATGTTAACAAAGATGTTCCTAGTGCTCTGCCTGG
TGCTGGGCATCATGGCATCGGTATCCGGACAGCCACACGCCCGTGCCAGC
GATCTCTACTATACGGACATAACGCCCGTGACCGACGAAACACGCTACAC
CACCCTCAATCCGGACGCACAGCTGAACGAGATGAACAAGGTGAAGCACT
CGAAGGGCAACGTGGTCTTCACCGCGGGAAAGCGGGCATCGGGTGACCGA
CTCATTGTGAACCACTACGATGACGACAGCTTTCCCAGTGCCAAGGATGT
GGAGGTGCTCATGAGCTATCCGGCCGGAGCCAGCACAGGGGTCACGCTGA
CGAGCATCGAGGTGTATGTGGACATGACGGCGGACGATGCCGGTGGCTAT
CTGACCAAGGGTGGCATCGGTCAGACCAACGTGGAGATTCTGCTGACCTC
CAATCAGACGCGCAGCTTCGTCTACGAGACGTTCATCTATGGGTACTAGA
AGCTTTCTAGACCAT
BS12115.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:36:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15044-RA | 483 | CG15044-PA | 1..483 | 17..499 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:36:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15044-RA | 822 | CG15044-RA | 116..598 | 17..499 | 2415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:36:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18491409..18491891 | 499..17 | 2415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:36:11 has no hits.
BS12115.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:31:00 Download gff for
BS12115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-RA | 1..483 | 17..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:14:56 Download gff for
BS12115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-RA | 103..595 | 11..508 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:23 Download gff for
BS12115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-RA | 121..598 | 22..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:31:01 Download gff for
BS12115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-RA | 103..595 | 11..508 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:22:19 Download gff for
BS12115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15044-RA | 121..598 | 22..499 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:22:19 Download gff for
BS12115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18491409..18491886 | 22..499 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:23 Download gff for
BS12115.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18385442..18385919 | 22..499 | 100 | | Minus |
BS12115.pep Sequence
Translation from 16 to 498
> BS12115.pep
MLTKMFLVLCLVLGIMASVSGQPHARASDLYYTDITPVTDETRYTTLNPD
AQLNEMNKVKHSKGNVVFTAGKRASGDRLIVNHYDDDSFPSAKDVEVLMS
YPAGASTGVTLTSIEVYVDMTADDAGGYLTKGGIGQTNVEILLTSNQTRS
FVYETFIYGY*
BS12115.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:51:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15044-PA | 160 | CG15044-PA | 1..160 | 1..160 | 821 | 100 | Plus |
CG15043-PB | 163 | CG15043-PB | 7..161 | 7..159 | 153 | 25.8 | Plus |
CG15043-PA | 163 | CG15043-PA | 7..161 | 7..159 | 153 | 25.8 | Plus |