BS12189.complete Sequence
1094 bp assembled on 2006-11-01
GenBank Submission: FJ637089
> BS12189.complete
GAAGTTATCAGTCGACATGCGGTCGTGGCCTGGCCTTTTCTGGCTGCTGA
CCCTGGCGCTCCTGGCGGATGGAGGTCGTCGCGAGTCCCAGCTCCGGATC
GGCAAGGCCATCAATATATTCCTGCGCTATGGCTACCTGGGAATCTCCAT
GCGTGTGATACCGCTCAATGACAACTCGGAGCCGGATCGCTGGGTGTTTA
AGGAGCCCACCAAAAACATCTATAGGAATCTGAGTGGCCTGGCGGAGAGT
CATGAAGACACCACGCCCGGAATCTTTCATGGAGACTTTCACATGGAGTT
CTGCGAGAATCGGAGGCAACTGTTCCAGGCCTACTTCCGTGACTTTTCCA
TTGAGCGAATGGACAAACCGTGGGAGGCATTTACTGGCGGATGGTTTCCG
GATAATGCGGCCAAGAAGCTGGGCATCAATACATCTTTCATCCAAGGCGA
TTACTCGTATGTTTTGGTGAGGGTGGTGCGCTTCAGGGAAACGGGGCGTC
TTAACGCTGAGATTCCGGTGCACCAACCCTTGGAGCCGGATGTGCGATCG
AGAATGGATCAACTGCAAATCGGAAATATAACTTCCGCAGTGCGATTTAT
GGAAGATGTGGGCACCCACTACGTAAACTCATACACCACCGGCAATTCGC
TGTATCAGGTGTTTGTGTACAGCAGGAAGAACTACAGCATGATCAAGGAG
CGAATCAAGAGTAAAGGTCTGAACGGACTGTCCAAGTTGGATCTTTACAA
CTACTTTGCGCCCTGGTTTGCCGCCCATCTGGGCCAGATTCGATCGGCTA
GTGCCAATGCTACAGTGGAAAGATGGGCGAGAAGGAAGCTGCAGTACGAG
TACTATGTGGTCAAGTATGTGACCCTGCTGAAACTGCACGGTAATAGTAC
TCTACTGCGATCCCTGGACTCGCTGCTCGGCAACGATGCCATACTGCAGT
TGGACCTCAAGTCGCTGAAGCCCATCTTCCGGGAGGAGCCGGAAAAGGAG
AGCTGGTACCACGAGGTTCTCGACAACAATGTGAAGCTCTGGGAGCTTAA
CATGCCGCAGAGTCATCCCACCCGATAGAAGCTTTCTAGACCAT
BS12189.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:26:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsl-RC | 1062 | CG6705-PC | 1..1062 | 17..1078 | 5310 | 100 | Plus |
| tsl-RA | 1062 | CG6705-PA | 1..1062 | 17..1078 | 5310 | 100 | Plus |
| tsl-RB | 1062 | CG6705-PB | 1..1062 | 17..1078 | 5310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:26:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsl-RC | 2059 | CG6705-RC | 760..1821 | 17..1078 | 5310 | 100 | Plus |
| tsl-RA | 1871 | CG6705-RA | 572..1633 | 17..1078 | 5310 | 100 | Plus |
| tsl-RB | 1375 | CG6705-RB | 76..1137 | 17..1078 | 5310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21778352..21779204 | 1078..226 | 4265 | 100 | Minus |
| 3R | 32079331 | 3R | 21779552..21779761 | 226..17 | 1050 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 08:26:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 7136..7233 | 952..1046 | 112 | 62.6 | Plus |
BS12189.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:46:23 Download gff for
BS12189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsl-RA | 1..1062 | 17..1078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:21:25 Download gff for
BS12189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsl-RA | 566..1641 | 10..1088 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:31:15 Download gff for
BS12189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsl-RB | 76..1137 | 17..1078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:46:24 Download gff for
BS12189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsl-RA | 566..1641 | 10..1088 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:18:36 Download gff for
BS12189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsl-RB | 76..1137 | 17..1078 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:18:36 Download gff for
BS12189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21779552..21779761 | 17..226 | 100 | | Minus |
| 3R | 21778352..21779203 | 227..1078 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:31:15 Download gff for
BS12189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17604074..17604925 | 227..1078 | 100 | <- | Minus |
| arm_3R | 17605274..17605483 | 17..226 | 100 | | Minus |
BS12189.pep Sequence
Translation from 16 to 1077
> BS12189.pep
MRSWPGLFWLLTLALLADGGRRESQLRIGKAINIFLRYGYLGISMRVIPL
NDNSEPDRWVFKEPTKNIYRNLSGLAESHEDTTPGIFHGDFHMEFCENRR
QLFQAYFRDFSIERMDKPWEAFTGGWFPDNAAKKLGINTSFIQGDYSYVL
VRVVRFRETGRLNAEIPVHQPLEPDVRSRMDQLQIGNITSAVRFMEDVGT
HYVNSYTTGNSLYQVFVYSRKNYSMIKERIKSKGLNGLSKLDLYNYFAPW
FAAHLGQIRSASANATVERWARRKLQYEYYVVKYVTLLKLHGNSTLLRSL
DSLLGNDAILQLDLKSLKPIFREEPEKESWYHEVLDNNVKLWELNMPQSH
PTR*
BS12189.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsl-PC | 353 | CG6705-PC | 1..353 | 1..353 | 1874 | 100 | Plus |
| tsl-PA | 353 | CG6705-PA | 1..353 | 1..353 | 1874 | 100 | Plus |
| tsl-PB | 353 | CG6705-PB | 1..353 | 1..353 | 1874 | 100 | Plus |
