BS12190.complete Sequence
1031 bp assembled on 2006-11-01
GenBank Submission: FJ637090
> BS12190.complete
GAAGTTATCAGTCGACATGTTTTGCCGAATATCCGGCAATAAAAGCCGGG
GCAAGGTCATAGCCAAAACAGTTCACAGCGATATGCTTTGGCGCTGCGAG
TATCTTATTTTGGGAATGCTGCTCTTGGCCGAGCTTACCCAGTTGGGTGA
AGCGGTGACAGCCAATCAGCAAAGGAGAAACAGGAGACTGAGAAGCGACA
ACGGAACCAAGAGGTTGACGGGCACAAAAAACCAAACCGGAATCAGAAGC
AATCGACGCCAAGGTACAGCGAGGAAACTCTCCGCCAAGAGGGTCAACCA
GAACAAAAAGGCCGCCACATCGTCCAAGATTCAGTCCAGGATTGTGGGTG
GCACCAGTACCACTATTTCCACCACACCGTACATTGTTCAGTTGCGTCGA
GGATCGAATCTGTGTAGCGGTTCCCTCATAACCGAGCAATGGGTTCTAAC
TGCTGCCCATTGCGTCAAGGGATACAGTGCCTCCGATTTCACGGTGCGCG
GAGGAACCACTACTTTGGATGGGAGTGATGGCGTCACTCGCTCCGTCAGT
TCCATTCATGTGGCTCCGAAGTTCACCTCGAAGAAAATGAACATGGATGC
AGCTTTGCTGAAGCTGAACCAATCCCTGACGGGCACCAATATCGGAACCA
TATCAATGGGCAACTATCGACCCAAGGCCGGTTCAAGGGTACGCATTGCA
GGATGGGGTGTGACCAAGGAAGGTTCTACAACGGCATCCAAAACTCTGCA
GACCGCCCAGATAAGGGTGGTCAGGCAGCAAAAGTGTCGGAAGGACTACC
GCGGTCAGGCTACCATCACCAAGTACATGCTTTGTGCCCGCGCTGCTGGC
AAGGATTCATGCAGCGGAGACTCCGGTGGCCCAGTGACCAGGAACAACAC
ACTCTTGGGCATCGTATCCTTTGGCTACGGGTGCGCCAGAGCCGGCTACC
CAGGTGTATACACAGCCGTGGTTGCGATCCGCCAGTGGGCCACCAACATC
ATGGCCAACAATTGAAAGCTTTCTAGACCAT
BS12190.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:48:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32269-RB | 999 | CG32269-PB | 1..999 | 17..1015 | 4995 | 100 | Plus |
| CG32269-RA | 999 | CG32269-PA | 1..999 | 17..1015 | 4995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32270-RA | 2037 | CG32270-RA | 965..1963 | 17..1015 | 4995 | 100 | Plus |
| CG32269-RB | 1195 | CG32269-RB | 123..1121 | 17..1015 | 4995 | 100 | Plus |
| CG32269-RA | 2037 | CG32269-RA | 965..1963 | 17..1015 | 4995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:48:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3207023..3208021 | 1015..17 | 4995 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:48:18 has no hits.
BS12190.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:46:08 Download gff for
BS12190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32269-RA | 1..999 | 17..1015 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:21:07 Download gff for
BS12190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32270-RA | 955..1965 | 6..1021 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:33:46 Download gff for
BS12190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32270-RA | 972..1962 | 24..1014 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:46:08 Download gff for
BS12190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32270-RA | 955..1965 | 6..1021 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:26:42 Download gff for
BS12190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32269-RA | 972..1962 | 24..1014 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:26:42 Download gff for
BS12190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3207024..3208014 | 24..1014 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:33:46 Download gff for
BS12190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3207024..3208014 | 24..1014 | 100 | | Minus |
BS12190.pep Sequence
Translation from 16 to 1014
> BS12190.pep
MFCRISGNKSRGKVIAKTVHSDMLWRCEYLILGMLLLAELTQLGEAVTAN
QQRRNRRLRSDNGTKRLTGTKNQTGIRSNRRQGTARKLSAKRVNQNKKAA
TSSKIQSRIVGGTSTTISTTPYIVQLRRGSNLCSGSLITEQWVLTAAHCV
KGYSASDFTVRGGTTTLDGSDGVTRSVSSIHVAPKFTSKKMNMDAALLKL
NQSLTGTNIGTISMGNYRPKAGSRVRIAGWGVTKEGSTTASKTLQTAQIR
VVRQQKCRKDYRGQATITKYMLCARAAGKDSCSGDSGGPVTRNNTLLGIV
SFGYGCARAGYPGVYTAVVAIRQWATNIMANN*
BS12190.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32269-PB | 332 | CG32269-PB | 1..332 | 1..332 | 1697 | 100 | Plus |
| CG32269-PA | 332 | CG32269-PA | 1..332 | 1..332 | 1697 | 100 | Plus |
| CG3650-PA | 249 | CG3650-PA | 3..242 | 86..324 | 516 | 44.4 | Plus |
| CG33159-PA | 257 | CG33159-PA | 19..243 | 102..322 | 466 | 43.6 | Plus |
| CG33160-PA | 258 | CG33160-PA | 27..254 | 102..329 | 455 | 40.6 | Plus |
