BS12202.complete Sequence
1496 bp assembled on 2006-11-01
GenBank Submission: FJ637093
> BS12202.complete
GAAGTTATCAGTCGACATGGACGCTGAAAGTGATAGCGATGTGGAGATCA
TAGAGACGGAACTCATGAACCATCATCACCACCATCGCCAGACGGAACCA
AAGAGGCATCCCGCAAAGATGTACCCGCAAATTCCATCCGCCATACCCTC
CCCACCATTTTCACCCACTGATCCTACGGATATGCCGCTGGTCAAGGAGA
TTCTGGCTCGCAGTGAACATATAAATGTTCCCGAAGGAACCGTGCTCTGT
GTTCCGTGCTACCTGTGCAAACAGCCCTTCAATGATATTGAATCCTTCAA
GGAGCACCTCACCCAACATGCGGCGGAAATTAACGCCTGGAATAACACGC
GTGCGCAGGAGCAGACACCTCCGCCGACGATAACACCCTTTGTTCAGTCC
ATGAATAAACCATTCGTGCATCCCACAGATCAGCACTTATTTCATTCCAT
TGATCATGGTGACATGGATCACCATCACAATGCCCACTACCGCAATCGGA
TGGAGTTTGGCTGTCCGCCACCCATGGATTTTTACTCACCGCCGCTCGAA
CCAGAAATTCCATTTCAAATGCCTGCGGTTCATCAACATCCGATTCAGAT
ACCACCCATGTATATGACCGCTCAGCATACGGCTTATGAGCCACCAGTGC
AGTTTTTAGGTCATCGGCCACTCGAACTGCGCCAAAAACTTCCAATGTCA
CCGCAATCTCCTCTGGAGCCTTCTGGTCATCCAATGGCAAGCGCGATTCC
AAGTAACCAACATACTTCGCTTGAAATGCAAAACCTTTGTGTGCCGGAAG
GAATTCTCACAAGGGTGGAGGAACCACCGGTCTTGGAAAATCCCCGACCC
CAAGCACAAGATCCGATTCAGGATGCGGGTGCAGGGAAGTCCCGATCGGC
GGTTCTGATCGAACCCAAGCCCCCAAATGCCAAATCCTTGGCTTTCAATC
AAGGTCAGTTCGAGTGCAATTGGTGCGGAAAGCGATTGAGCTCCCGCCAG
TCGCTGAAATACCACGAGAGCCACTTCCACGGGAATAAAGAGCTGGCTGT
GAATCGGTTAGAGAAGAATTTGACCAAGCAGCATAAGTGCCTCACATGCA
AGAAACGCTACAAGCGGCGGACCTTCCTCCTGATGCACATGAAGGTCAAA
CACGGGATTGCTTTCCCGGGCAGAGTAAATGCTGATCCCGAATATCCAAA
ATCTGTAGATTCGCCTGTATCCGCGAAGGTTCCTGTCTCCCCAATGTCGT
CGCCGAACGAGGCACCGAAAAAGGAGATATGGAGCACACGAATATTCAAC
GCTGTGGCGGCAGCAAAGTATCAACCGGCCAGCGAGCGGGCGGACAAGTA
TCTGGTTGCGCCACGTCAGCAAACCGAGCAGTTGGAATCGGGTTTTACGA
TCACGTCCAAACGGACATATCCACTTCGTTCGCCCTACTTCAATCCGGAT
CTATGGCTGGACTGCGATTCATACTTATAGAAGCTTTCTAGACCAT
BS12202.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:00:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18446-RA | 1464 | CG18446-PA | 1..1464 | 17..1480 | 7320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:00:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18446-RA | 2115 | CG18446-RA | 280..1744 | 16..1480 | 7325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:00:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9871749..9873180 | 16..1447 | 7160 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:00:01 has no hits.
BS12202.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:46:12 Download gff for
BS12202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18446-RA | 1..1464 | 17..1480 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:21:12 Download gff for
BS12202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18446-RA | 273..1745 | 10..1486 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:43:19 Download gff for
BS12202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18446-RA | 281..1744 | 17..1480 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:46:12 Download gff for
BS12202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18446-RA | 273..1745 | 10..1486 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:12:29 Download gff for
BS12202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18446-RA | 281..1744 | 17..1480 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:12:29 Download gff for
BS12202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9871750..9873179 | 17..1446 | 100 | -> | Plus |
| 2R | 9873242..9873275 | 1447..1480 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:43:19 Download gff for
BS12202.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5759255..5760684 | 17..1446 | 100 | -> | Plus |
| arm_2R | 5760747..5760780 | 1447..1480 | 100 | | Plus |
BS12202.pep Sequence
Translation from 16 to 1479
> BS12202.pep
MDAESDSDVEIIETELMNHHHHHRQTEPKRHPAKMYPQIPSAIPSPPFSP
TDPTDMPLVKEILARSEHINVPEGTVLCVPCYLCKQPFNDIESFKEHLTQ
HAAEINAWNNTRAQEQTPPPTITPFVQSMNKPFVHPTDQHLFHSIDHGDM
DHHHNAHYRNRMEFGCPPPMDFYSPPLEPEIPFQMPAVHQHPIQIPPMYM
TAQHTAYEPPVQFLGHRPLELRQKLPMSPQSPLEPSGHPMASAIPSNQHT
SLEMQNLCVPEGILTRVEEPPVLENPRPQAQDPIQDAGAGKSRSAVLIEP
KPPNAKSLAFNQGQFECNWCGKRLSSRQSLKYHESHFHGNKELAVNRLEK
NLTKQHKCLTCKKRYKRRTFLLMHMKVKHGIAFPGRVNADPEYPKSVDSP
VSAKVPVSPMSSPNEAPKKEIWSTRIFNAVAAAKYQPASERADKYLVAPR
QQTEQLESGFTITSKRTYPLRSPYFNPDLWLDCDSYL*
BS12202.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18446-PA | 487 | CG18446-PA | 1..487 | 1..487 | 2666 | 100 | Plus |
